RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C BMH2P34730 273 aaKnown RBP8.95□□□□□ -0.98
PUP3YER094C RFC5P38251 354 aa8.95□□□□□ -0.98
PUP3YER094C KEL1P38853 1164 aaKnown RBP8.95□□□□□ -0.98
PUP3YER094C RPN10P38886 268 aaKnown RBP8.95□□□□□ -0.98
PUP3YER094C SNF7P39929 240 aaKnown RBP8.95□□□□□ -0.98
PUP3YER094C VPS30Q02948 557 aa8.95□□□□□ -0.98
PUP3YER094C PEX19Q07418 342 aa8.95□□□□□ -0.98
PUP3YER094C YPL150WQ12152 901 aa8.95□□□□□ -0.98
PUP3YER094C TUB2P02557 457 aaKnown RBP8.94□□□□□ -0.98
PUP3YER094C HSP82P02829 709 aaKnown RBP8.94□□□□□ -0.98
PUP3YER094C GAL2P13181 574 aa8.94□□□□□ -0.98
PUP3YER094C ROX1P25042 368 aa8.94□□□□□ -0.98
PUP3YER094C PUS5Q06244 254 aa8.94□□□□□ -0.98
PUP3YER094C SKG3Q06315 1026 aa8.94□□□□□ -0.98
PUP3YER094C LAP2Q10740 671 aa8.94□□□□□ -0.98
PUP3YER094C CLF1Q12309 687 aaPredicted RBP8.94□□□□□ -0.98
PUP3YER094C MYO1P08964 1928 aa8.93□□□□□ -0.98
PUP3YER094C CIT1P00890 479 aa8.93□□□□□ -0.98
PUP3YER094C KEX1P09620 729 aa8.93□□□□□ -0.98
PUP3YER094C CBP3P21560 335 aa8.93□□□□□ -0.98
PUP3YER094C SWI4P25302 1093 aaKnown RBP8.93□□□□□ -0.98
PUP3YER094C SPT21P35209 758 aa8.93□□□□□ -0.98
PUP3YER094C TPS3P38426 1054 aaKnown RBP8.93□□□□□ -0.98
PUP3YER094C PES4P39684 611 aa8.93□□□□□ -0.98
PUP3YER094C HYR1P40581 163 aaKnown RBP8.93□□□□□ -0.98
PUP3YER094C PIL1P53252 339 aaKnown RBP8.93□□□□□ -0.98
PUP3YER094C FOL1P53848 824 aa8.93□□□□□ -0.98
PUP3YER094C GDE1Q02979 1223 aa8.93□□□□□ -0.98
PUP3YER094C YDR341CQ05506 607 aaKnown RBP8.93□□□□□ -0.98
PUP3YER094C RDS1P25611 832 aa8.92□□□□□ -0.98
PUP3YER094C MAL33P38157 468 aa8.92□□□□□ -0.98
PUP3YER094C RXT2P38255 430 aa8.92□□□□□ -0.98
PUP3YER094C VHR2P40041 505 aa8.92□□□□□ -0.98
PUP3YER094C PEA2P40091 420 aa8.92□□□□□ -0.98
PUP3YER094C HAP5Q02516 242 aa8.92□□□□□ -0.98
PUP3YER094C CSR2Q12734 1121 aa8.92□□□□□ -0.98
PUP3YER094C VPS45P38932 577 aa8.91□□□□□ -0.98
PUP3YER094C TUS1Q06412 1307 aa8.9□□□□□ -0.98
PUP3YER094C MET6P05694 767 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C NUC1P08466 329 aa8.9□□□□□ -0.98
PUP3YER094C PGI1P12709 554 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C SAM2P19358 384 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C ARL1P38116 183 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C ACA1P39970 489 aa8.9□□□□□ -0.98
PUP3YER094C PCI8P40512 444 aa8.9□□□□□ -0.98
PUP3YER094C CIR1P42940 261 aa8.9□□□□□ -0.98
PUP3YER094C NAF1P53919 492 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C CWC15Q03772 175 aaKnown RBP8.9□□□□□ -0.98
PUP3YER094C CDC6P09119 513 aa8.89□□□□□ -0.99
PUP3YER094C RGP1P16664 663 aa8.89□□□□□ -0.99
PUP3YER094C SRP54P20424 541 aaKnown RBP8.89□□□□□ -0.99
PUP3YER094C ASF1P32447 279 aa8.89□□□□□ -0.99
PUP3YER094C TOM71P38825 639 aaKnown RBP8.89□□□□□ -0.99
PUP3YER094C UBP9P39967 754 aa8.89□□□□□ -0.99
PUP3YER094C RSM25P40496 264 aa8.89□□□□□ -0.99
PUP3YER094C MDM1Q01846 1127 aa8.89□□□□□ -0.99
PUP3YER094C DSE3Q08729 430 aa8.89□□□□□ -0.99
PUP3YER094C GET3Q12154 354 aaKnown RBP8.89□□□□□ -0.99
PUP3YER094C AIM44Q99299 758 aa8.89□□□□□ -0.99
PUP3YER094C HXK1P04806 485 aaKnown RBP8.88□□□□□ -0.99
PUP3YER094C VPS1P21576 704 aaKnown RBP8.88□□□□□ -0.99
PUP3YER094C MBR1P23493 339 aa8.88□□□□□ -0.99
PUP3YER094C SPB4P25808 606 aaPredicted RBP8.88□□□□□ -0.99
PUP3YER094C SEC20P28791 383 aa8.88□□□□□ -0.99
PUP3YER094C RVS167P39743 482 aaKnown RBP8.88□□□□□ -0.99
PUP3YER094C TIF4631P39935 952 aaKnown RBP8.88□□□□□ -0.99
PUP3YER094C CCT5P40413 562 aaKnown RBP8.88□□□□□ -0.99
PUP3YER094C LSB1P53281 241 aa8.88□□□□□ -0.99
PUP3YER094C GIS4Q04233 774 aa8.88□□□□□ -0.99
PUP3YER094C APC11Q12157 165 aa8.88□□□□□ -0.99
PUP3YER094C GIN4Q12263 1142 aa8.88□□□□□ -0.99
PUP3YER094C CEX1Q12453 761 aa8.88□□□□□ -0.99
PUP3YER094C NBL1Q3E7Y6 73 aa8.88□□□□□ -0.99
PUP3YER094C ERG12P07277 443 aa8.87□□□□□ -0.99
PUP3YER094C FRS2P15625 503 aaKnown RBP8.87□□□□□ -0.99
PUP3YER094C STI1P15705 589 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
PUP3YER094C CLC1P17891 233 aa8.87□□□□□ -0.99
PUP3YER094C MAK11P20484 414 aaKnown RBP8.87□□□□□ -0.99
PUP3YER094C SAS3P34218 831 aa8.87□□□□□ -0.99
PUP3YER094C PEX21P50091 288 aa8.87□□□□□ -0.99
PUP3YER094C FAR11P53917 953 aa8.87□□□□□ -0.99
PUP3YER094C PEX29Q03370 554 aa8.87□□□□□ -0.99
PUP3YER094C CSC1Q06538 782 aa8.87□□□□□ -0.99
PUP3YER094C DCS2Q12123 353 aa8.87□□□□□ -0.99
PUP3YER094C KRS1P15180 591 aaKnown RBP8.86□□□□□ -0.99
PUP3YER094C DID4P36108 232 aa8.86□□□□□ -0.99
PUP3YER094C TPM2P40414 161 aa8.86□□□□□ -0.99
PUP3YER094C YGL138CP53122 345 aa8.86□□□□□ -0.99
PUP3YER094C SMD2Q06217 110 aaKnown RBP8.86□□□□□ -0.99
PUP3YER094C VIP1Q06685 1146 aaKnown RBP8.86□□□□□ -0.99
PUP3YER094C ETT1Q08421 412 aaKnown RBP8.86□□□□□ -0.99
PUP3YER094C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.86□□□□□ -0.99not detected
PUP3YER094C RPL8AP17076 256 aaKnown RBP8.85□□□□□ -0.99
PUP3YER094C SSA4P22202 642 aaKnown RBP8.85□□□□□ -0.99
PUP3YER094C ELM1P32801 640 aa8.85□□□□□ -0.99
PUP3YER094C PNT1P38969 423 aa8.85□□□□□ -0.99
PUP3YER094C CCT3P39077 534 aaKnown RBP8.85□□□□□ -0.99
PUP3YER094C SUE1Q06524 206 aa8.85□□□□□ -0.99
PUP3YER094C UTP4Q06679 776 aaKnown RBP8.85□□□□□ -0.99
PUP3YER094C SUB2Q07478 446 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms