RNA–Protein interactions for RNA: YEL024W

RIP1, Transcript of Ubiquinol-cytochrome-c reductase, yeast

Gene RIP1, Length 648 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIP1	YEL024W	MBR1	P23493	339 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	YEL043W	P32618	956 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	PRP40	P33203	583 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	KIC1	P38692	1080 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	PTC2	P39966	464 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	YGL082W	P53155	381 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	VPS75	P53853	264 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	PKH3	Q03306	898 aa	Predicted RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	SRC1	Q03707	834 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	GFD1	Q04839	188 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	RPN7	Q06103	429 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	IMH1	Q06704	911 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	TUM1	Q08686	304 aa	Known RBP	5.07	□□□□□ -1.6
RIP1	YEL024W	GIN4	Q12263	1142 aa		5.07	□□□□□ -1.6
RIP1	YEL024W	POM152	P39685	1337 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	COB	P00163	385 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	RGP1	P16664	663 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	RAD54	P32863	898 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	RER2	P35196	286 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	ADE17	P38009	592 aa	Known RBP	5.06	□□□□□ -1.6
RIP1	YEL024W	VHR2	P40041	505 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	FYV8	P46949	817 aa	Known RBP	5.06	□□□□□ -1.6
RIP1	YEL024W	YJL181W	P46987	611 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	VPS70	P47161	811 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	CTH1	P47976	325 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	CUE3	P53137	624 aa	Known RBP	5.06	□□□□□ -1.6
RIP1	YEL024W	ALD3	P54114	506 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	ECM23	Q02710	187 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	FCP1	Q03254	732 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	COG4	Q06096	861 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	ISU2	Q12056	156 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	PSF3	Q12146	194 aa		5.06	□□□□□ -1.6
RIP1	YEL024W	PGA3	Q12746	312 aa	Known RBP	5.06	□□□□□ -1.6
RIP1	YEL024W	TY4B-H	P0C2J7	1802 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	TY4B-J	P47024	1803 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	STE11	P23561	717 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	BMH1	P29311	267 aa	Known RBP	5.05	□□□□□ -1.6
RIP1	YEL024W	SLA1	P32790	1244 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	MNR2	P35724	969 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	MAL31	P38156	614 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	HXT10	P43581	546 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	MAL13	P53338	473 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	ALF1	P53904	254 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	SSL2	Q00578	843 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	RAT1	Q02792	1006 aa	Known RBP	5.05	□□□□□ -1.6
RIP1	YEL024W	UBP16	Q02863	499 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	GDE1	Q02979	1223 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	WAR1	Q03631	944 aa		5.05	□□□□□ -1.6
RIP1	YEL024W	VMS1	Q04311	632 aa	Known RBP	5.05	□□□□□ -1.6
RIP1	YEL024W	NOP14	Q99207	810 aa	Known RBP	5.05	□□□□□ -1.6
RIP1	YEL024W	URB1	P34241	1764 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	MCM3	P24279	971 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	DPB3	P27344	201 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	SAC6	P32599	642 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	NFU1	P32860	256 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	EFM2	P38347	419 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	RPN10	P38886	268 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	YMR147W	P40218	223 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	NDC80	P40460	691 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	APT1	P49435	187 aa	Known RBP	5.04	□□□□□ -1.6
RIP1	YEL024W	RNT1	Q02555	471 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	KAR5	Q04746	504 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	NYV1	Q12255	253 aa		5.04	□□□□□ -1.6
RIP1	YEL024W	LAM4	P38800	1345 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	GAP1	P19145	602 aa	Predicted RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	HCA4	P20448	770 aa	Known RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	DEP1	P31385	405 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	SRP40	P32583	406 aa	Predicted RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	HAL5	P38970	855 aa	Known RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	RBA50	Q04418	439 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	VPS38	Q05919	439 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	MRD1	Q06106	887 aa	Known RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	CSC1	Q06538	782 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	TIP41	Q12199	356 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	CLF1	Q12309	687 aa	Predicted RBP	5.03	□□□□□ -1.6
RIP1	YEL024W	DPH6	Q12429	685 aa		5.03	□□□□□ -1.6
RIP1	YEL024W	PDR1	P12383	1068 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	PET123	P17558	318 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	PHO13	P19881	312 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	MSH3	P25336	1018 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	NGR1	P32831	672 aa	Known RBP	5.02	□□□□□ -1.61
RIP1	YEL024W	BYE1	P36106	594 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	AKR1	P39010	764 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	EPL1	P43572	832 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	PRP31	P49704	494 aa	Predicted RBP	5.02	□□□□□ -1.61
RIP1	YEL024W	NAF1	P53919	492 aa	Known RBP	5.02	□□□□□ -1.61
RIP1	YEL024W	UFD2	P54860	961 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	RPS15	Q01855	142 aa	Known RBP	5.02	□□□□□ -1.61
RIP1	YEL024W	UBX2	Q04228	584 aa		5.02	□□□□□ -1.61
RIP1	YEL024W	GET3	Q12154	354 aa	Known RBP	5.02	□□□□□ -1.61
RIP1	YEL024W	COX6	P00427	148 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	CDC37	P06101	506 aa	Known RBP	5.01	□□□□□ -1.61
RIP1	YEL024W	SDH2	P21801	266 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	CLB1	P24868	471 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	SWI4	P25302	1093 aa	Known RBP	5.01	□□□□□ -1.61
RIP1	YEL024W	CDC15	P27636	974 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	SRB4	P32569	687 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	YKR075C	P36155	307 aa		5.01	□□□□□ -1.61
RIP1	YEL024W	BOI1	P38041	980 aa	Known RBP	5.01	□□□□□ -1.61
RIP1	YEL024W	GLO3	P38682	493 aa	Known RBP	5.01	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 854.3 ms