RNA–Protein interactions for RNA: YDR504C

SPG3, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG3, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG3YDR504C PUP1P25043 261 aa4.48□□□□□ -1.69
SPG3YDR504C MSH4P40965 878 aaPredicted RBP4.48□□□□□ -1.69
SPG3YDR504C GCV1P48015 400 aa4.48□□□□□ -1.69
SPG3YDR504C ALT1P52893 592 aa4.48□□□□□ -1.69
SPG3YDR504C YLL054CQ12244 843 aa4.48□□□□□ -1.69
SPG3YDR504C YVC1Q12324 675 aa4.48□□□□□ -1.69
SPG3YDR504C CPS1P27614 576 aa4.47□□□□□ -1.69
SPG3YDR504C ALG6Q12001 544 aaKnown RBP4.47□□□□□ -1.69
SPG3YDR504C SOD2P00447 233 aa4.45□□□□□ -1.7
SPG3YDR504C PTC7P38797 343 aa4.45□□□□□ -1.7
SPG3YDR504C CTR9P89105 1077 aa4.45□□□□□ -1.7
SPG3YDR504C CLU1Q03690 1277 aaKnown RBP4.45□□□□□ -1.7
SPG3YDR504C CWC15Q03772 175 aaKnown RBP4.45□□□□□ -1.7
SPG3YDR504C YIG1Q08956 461 aa4.45□□□□□ -1.7
SPG3YDR504C YPL277CQ08989 487 aa4.45□□□□□ -1.7
SPG3YDR504C HTS1P07263 546 aaKnown RBP4.43□□□□□ -1.7
SPG3YDR504C SMC1P32908 1225 aa4.43□□□□□ -1.7
SPG3YDR504C ETP1P38748 585 aaKnown RBP4.43□□□□□ -1.7
SPG3YDR504C GTS1P40956 396 aa4.43□□□□□ -1.7
SPG3YDR504C COBP00163 385 aa4.42□□□□□ -1.7
SPG3YDR504C CTS1P29029 562 aa4.42□□□□□ -1.7
SPG3YDR504C RRN6P32786 894 aa4.42□□□□□ -1.7
SPG3YDR504C MEC3Q02574 474 aa4.42□□□□□ -1.7
SPG3YDR504C PNP1Q05788 311 aa4.42□□□□□ -1.7
SPG3YDR504C NPR1P22211 790 aa4.41□□□□□ -1.7
SPG3YDR504C REI1P38344 393 aaPredicted RBP4.41□□□□□ -1.7
SPG3YDR504C CMR1Q12510 522 aaKnown RBP4.41□□□□□ -1.7
SPG3YDR504C YML083CQ04526 418 aa4.4□□□□□ -1.71
SPG3YDR504C RPS13P05756 151 aaKnown RBP4.39□□□□□ -1.71
SPG3YDR504C DUR3P33413 735 aa4.39□□□□□ -1.71
SPG3YDR504C RIM11P38615 370 aa4.39□□□□□ -1.71
SPG3YDR504C ELA1P53861 379 aaPredicted RBP4.39□□□□□ -1.71
SPG3YDR504C RQC2Q12532 1038 aaKnown RBP4.39□□□□□ -1.71
SPG3YDR504C YLR358CO13565 187 aa4.38□□□□□ -1.71
SPG3YDR504C SMY2P32909 740 aaKnown RBP4.38□□□□□ -1.71
SPG3YDR504C YGR045CP53229 120 aa4.38□□□□□ -1.71
SPG3YDR504C UTP22P53254 1237 aaPredicted RBP4.38□□□□□ -1.71
SPG3YDR504C LSO1Q3E827 93 aa4.38□□□□□ -1.71
SPG3YDR504C PRP5P21372 849 aaPredicted RBP4.35□□□□□ -1.71
SPG3YDR504C SLI1P53304 468 aa4.35□□□□□ -1.71
SPG3YDR504C PUS9Q12069 462 aa4.35□□□□□ -1.71
SPG3YDR504C PRE10P21242 288 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SPG3YDR504C NNK1P36003 928 aa4.33□□□□□ -1.72
SPG3YDR504C PUS7Q08647 676 aaKnown RBP4.33□□□□□ -1.72
SPG3YDR504C BOL3P39724 118 aa4.32□□□□□ -1.72
SPG3YDR504C SNO2P53823 222 aa4.32□□□□□ -1.72
SPG3YDR504C TPP1Q03796 238 aa4.32□□□□□ -1.72
SPG3YDR504C AVO1Q08236 1176 aa4.32□□□□□ -1.72
SPG3YDR504C TY1A-LR4P0C2I8 440 aaKnown RBP4.31□□□□□ -1.72
SPG3YDR504C TY1A-DR6P0CX70 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-ER1P0CX71 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-LR2P0CX72 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-PLP0CX73 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-JR1P0CX74 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-LR3P0CX75 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-ML2P0CX76 440 aa4.31□□□□□ -1.72
SPG3YDR504C ECM2P38241 364 aaKnown RBP4.31□□□□□ -1.72
SPG3YDR504C NMD3P38861 518 aaKnown RBP4.31□□□□□ -1.72
SPG3YDR504C MPT5P39016 859 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72 RIP-Chip
SPG3YDR504C TY1A-GR1Q12085 440 aa4.31□□□□□ -1.72
SPG3YDR504C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.31□□□□□ -1.72
SPG3YDR504C TY1A-OLQ92392 440 aaKnown RBP4.31□□□□□ -1.72
SPG3YDR504C NOB1Q08444 459 aaKnown RBP4.3□□□□□ -1.72
SPG3YDR504C FUR4P05316 633 aaKnown RBP4.29□□□□□ -1.72
SPG3YDR504C SAM35P14693 329 aa4.29□□□□□ -1.72
SPG3YDR504C TRM2P33753 639 aa4.28□□□□□ -1.72
SPG3YDR504C TAT2P38967 592 aa4.28□□□□□ -1.72
SPG3YDR504C FOL2P51601 243 aaKnown RBP4.28□□□□□ -1.72
SPG3YDR504C RSC4Q02206 625 aa4.28□□□□□ -1.72
SPG3YDR504C YHL012WP38709 493 aa4.27□□□□□ -1.73
SPG3YDR504C MSE1P48525 536 aa4.27□□□□□ -1.73
SPG3YDR504C SNM1P40993 198 aa4.26□□□□□ -1.73
SPG3YDR504C YDR132CQ03900 495 aa4.26□□□□□ -1.73
SPG3YDR504C AIM26P32858 118 aa4.25□□□□□ -1.73
SPG3YDR504C ARL1P38116 183 aaKnown RBP4.25□□□□□ -1.73
SPG3YDR504C SLS1P42900 643 aa4.25□□□□□ -1.73
SPG3YDR504C SAP155P43612 1002 aa4.25□□□□□ -1.73
SPG3YDR504C SPT20P50875 604 aa4.24□□□□□ -1.73
SPG3YDR504C YAF9P53930 226 aa4.24□□□□□ -1.73
SPG3YDR504C YLR257WQ06146 321 aaKnown RBP4.24□□□□□ -1.73
SPG3YDR504C RET1P22276 1149 aaKnown RBP4.23□□□□□ -1.73
SPG3YDR504C MDL2P33311 773 aa4.22□□□□□ -1.73
SPG3YDR504C SUN4P53616 420 aa4.22□□□□□ -1.73
SPG3YDR504C FLP1P03870 423 aa4.21□□□□□ -1.74
SPG3YDR504C MCM5P29496 775 aaKnown RBP4.21□□□□□ -1.74
SPG3YDR504C EXO5P38289 585 aa4.21□□□□□ -1.74
SPG3YDR504C NEM1P38757 446 aa4.21□□□□□ -1.74
SPG3YDR504C YAR028WP39548 234 aa4.21□□□□□ -1.74
SPG3YDR504C NUT1P53114 1132 aa4.21□□□□□ -1.74
SPG3YDR504C CTF4Q01454 927 aa4.21□□□□□ -1.74
SPG3YDR504C PMT7Q06644 662 aa4.21□□□□□ -1.74
SPG3YDR504C RAD53P22216 821 aa4.2□□□□□ -1.74
SPG3YDR504C MEF2P39677 819 aa4.2□□□□□ -1.74
SPG3YDR504C UFD2P54860 961 aa4.2□□□□□ -1.74
SPG3YDR504C GCN5Q03330 439 aa4.2□□□□□ -1.74
SPG3YDR504C YKL077WP36081 392 aa4.19□□□□□ -1.74
SPG3YDR504C GLO3P38682 493 aaKnown RBP4.19□□□□□ -1.74
SPG3YDR504C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74 RIP-Chip
SPG3YDR504C SSA4P22202 642 aaKnown RBP4.18□□□□□ -1.74
SPG3YDR504C LAM1P38851 1228 aa4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms