RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MSH6Q03834 1242 aa6.44□□□□□ -1.38
RPN9YDR427W HTS1P07263 546 aaKnown RBP6.43□□□□□ -1.38
RPN9YDR427W MSH4P40965 878 aaPredicted RBP6.43□□□□□ -1.38
RPN9YDR427W ALT1P52893 592 aa6.43□□□□□ -1.38
RPN9YDR427W MEC3Q02574 474 aa6.43□□□□□ -1.38
RPN9YDR427W NPR1P22211 790 aa6.42□□□□□ -1.38
RPN9YDR427W CTR9P89105 1077 aa6.42□□□□□ -1.38
RPN9YDR427W SSY1Q03770 852 aa6.42□□□□□ -1.38
RPN9YDR427W PRP6P19735 899 aaPredicted RBP6.41□□□□□ -1.38
RPN9YDR427W CDC3P32457 520 aaKnown RBP6.41□□□□□ -1.38
RPN9YDR427W THI80P35202 319 aa6.41□□□□□ -1.38
RPN9YDR427W REI1P38344 393 aaPredicted RBP6.41□□□□□ -1.38
RPN9YDR427W RIM11P38615 370 aa6.41□□□□□ -1.38
RPN9YDR427W UTP22P53254 1237 aaPredicted RBP6.4□□□□□ -1.38
RPN9YDR427W YVC1Q12324 675 aa6.4□□□□□ -1.38
RPN9YDR427W CMR1Q12510 522 aaKnown RBP6.4□□□□□ -1.38
RPN9YDR427W PRO1P32264 428 aa6.39□□□□□ -1.39
RPN9YDR427W PRP5P21372 849 aaPredicted RBP6.38□□□□□ -1.39
RPN9YDR427W PEX7P39108 375 aa6.38□□□□□ -1.39
RPN9YDR427W UFD2P54860 961 aa6.38□□□□□ -1.39
RPN9YDR427W ALG6Q12001 544 aaKnown RBP6.38□□□□□ -1.39
RPN9YDR427W COBP00163 385 aa6.37□□□□□ -1.39
RPN9YDR427W NFS1P25374 497 aa6.37□□□□□ -1.39
RPN9YDR427W SMY2P32909 740 aaKnown RBP6.37□□□□□ -1.39
RPN9YDR427W EAR1Q03212 550 aa6.37□□□□□ -1.39
RPN9YDR427W HDA2Q06629 674 aa6.37□□□□□ -1.39
RPN9YDR427W LPX1Q12405 387 aaKnown RBP6.37□□□□□ -1.39
RPN9YDR427W FLR1P38124 548 aa6.36□□□□□ -1.39
RPN9YDR427W RSC4Q02206 625 aa6.36□□□□□ -1.39
RPN9YDR427W NNK1P36003 928 aa6.35□□□□□ -1.39
RPN9YDR427W KAR5Q04746 504 aa6.35□□□□□ -1.39
RPN9YDR427W PTC7P38797 343 aa6.34□□□□□ -1.39
RPN9YDR427W AVO1Q08236 1176 aa6.34□□□□□ -1.39
RPN9YDR427W ARL1P38116 183 aaKnown RBP6.33□□□□□ -1.4
RPN9YDR427W AIM3P38266 947 aaKnown RBP6.33□□□□□ -1.4
RPN9YDR427W RIM8P53179 542 aa6.33□□□□□ -1.4
RPN9YDR427W ELA1P53861 379 aaPredicted RBP6.33□□□□□ -1.4
RPN9YDR427W MRPL22P53881 309 aa6.33□□□□□ -1.4
RPN9YDR427W GLO3P38682 493 aaKnown RBP6.32□□□□□ -1.4
RPN9YDR427W QDR1P40475 563 aa6.32□□□□□ -1.4
RPN9YDR427W YGR045CP53229 120 aa6.32□□□□□ -1.4
RPN9YDR427W TRL1P09880 827 aaKnown RBP6.31□□□□□ -1.4
RPN9YDR427W HAT1Q12341 374 aa6.31□□□□□ -1.4
RPN9YDR427W DUR3P33413 735 aa6.3□□□□□ -1.4
RPN9YDR427W GTS1P40956 396 aa6.3□□□□□ -1.4
RPN9YDR427W ATG1P53104 897 aa6.3□□□□□ -1.4
RPN9YDR427W GIS1Q03833 894 aa6.3□□□□□ -1.4
RPN9YDR427W PMT7Q06644 662 aa6.3□□□□□ -1.4
RPN9YDR427W SAP155P43612 1002 aa6.29□□□□□ -1.4
RPN9YDR427W ACF4P47129 309 aa6.29□□□□□ -1.4
RPN9YDR427W SSF1P38789 453 aaPredicted RBP6.28□□□□□ -1.4
RPN9YDR427W ERP5P38819 212 aa6.28□□□□□ -1.4
RPN9YDR427W GSF2Q04697 403 aaKnown RBP6.28□□□□□ -1.4
RPN9YDR427W BSC2Q05611 235 aa6.28□□□□□ -1.4
RPN9YDR427W FOL2P51601 243 aaKnown RBP6.27□□□□□ -1.41
RPN9YDR427W YNL011CP53980 444 aa6.27□□□□□ -1.41
RPN9YDR427W PUS7Q08647 676 aaKnown RBP6.27□□□□□ -1.41
RPN9YDR427W YDL177CQ12257 170 aa6.27□□□□□ -1.41
RPN9YDR427W YBL113CQ7M4S9 792 aa6.27□□□□□ -1.41
RPN9YDR427W SOD2P00447 233 aa6.26□□□□□ -1.41
RPN9YDR427W MDJ2P42834 146 aa6.26□□□□□ -1.41
RPN9YDR427W TPP1Q03796 238 aa6.26□□□□□ -1.41
RPN9YDR427W MNL2Q12205 849 aa6.26□□□□□ -1.41
RPN9YDR427W YKL077WP36081 392 aa6.25□□□□□ -1.41
RPN9YDR427W ETP1P38748 585 aaKnown RBP6.25□□□□□ -1.41
RPN9YDR427W NUT1P53114 1132 aa6.25□□□□□ -1.41
RPN9YDR427W YAF9P53930 226 aa6.25□□□□□ -1.41
RPN9YDR427W NOP8Q08287 484 aaPredicted RBP6.25□□□□□ -1.41
RPN9YDR427W FLP1P03870 423 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-LR4P0C2I8 440 aaKnown RBP6.24□□□□□ -1.41
RPN9YDR427W TY1A-DR6P0CX70 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-ER1P0CX71 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-LR2P0CX72 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-PLP0CX73 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-JR1P0CX74 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-LR3P0CX75 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-ML2P0CX76 440 aa6.24□□□□□ -1.41
RPN9YDR427W MCM5P29496 775 aaKnown RBP6.24□□□□□ -1.41
RPN9YDR427W TOD6P34219 525 aa6.24□□□□□ -1.41
RPN9YDR427W SNO2P53823 222 aa6.24□□□□□ -1.41
RPN9YDR427W TRS120Q04183 1289 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-GR1Q12085 440 aa6.24□□□□□ -1.41
RPN9YDR427W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.24□□□□□ -1.41
RPN9YDR427W TY1A-OLQ92392 440 aaKnown RBP6.24□□□□□ -1.41
RPN9YDR427W SHU2P38957 223 aa6.23□□□□□ -1.41
RPN9YDR427W YML020WQ03722 664 aa6.23□□□□□ -1.41
RPN9YDR427W RPS13P05756 151 aaKnown RBP6.22□□□□□ -1.41
RPN9YDR427W GRS1P38088 690 aaKnown RBP6.22□□□□□ -1.41
RPN9YDR427W YHL012WP38709 493 aa6.22□□□□□ -1.41
RPN9YDR427W CDC55Q00362 526 aa6.22□□□□□ -1.41
RPN9YDR427W RVS167P39743 482 aaKnown RBP6.21□□□□□ -1.42
RPN9YDR427W YPL277CQ08989 487 aa6.21□□□□□ -1.42
RPN9YDR427W MDL2P33311 773 aa6.2□□□□□ -1.42
RPN9YDR427W YLR358CO13565 187 aa6.19□□□□□ -1.42
RPN9YDR427W HSE1P38753 452 aa6.19□□□□□ -1.42
RPN9YDR427W YAR028WP39548 234 aa6.19□□□□□ -1.42
RPN9YDR427W SEN54Q02825 467 aaPredicted RBP6.19□□□□□ -1.42
RPN9YDR427W STM1P39015 273 aaKnown RBP6.18□□□□□ -1.42
RPN9YDR427W NUT2Q06213 157 aa6.18□□□□□ -1.42
RPN9YDR427W INP54Q08227 384 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms