RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C UTP22P53254 1237 aaPredicted RBP7.28□□□□□ -1.24
LSM6YDR378C SAC7P17121 654 aa7.27□□□□□ -1.25
LSM6YDR378C PAN5P38787 379 aa7.27□□□□□ -1.25
LSM6YDR378C VAC8P39968 578 aa7.27□□□□□ -1.25
LSM6YDR378C TED1P40533 473 aa7.27□□□□□ -1.25
LSM6YDR378C XKS1P42826 600 aa7.27□□□□□ -1.25
LSM6YDR378C YGL140CP53120 1219 aa7.27□□□□□ -1.25
LSM6YDR378C ALD6P54115 500 aaKnown RBP7.27□□□□□ -1.25
LSM6YDR378C GCR1P07261 785 aa7.26□□□□□ -1.25
LSM6YDR378C RAD27P26793 382 aa7.26□□□□□ -1.25
LSM6YDR378C MRL1Q06815 381 aa7.26□□□□□ -1.25
LSM6YDR378C YIG1Q08956 461 aa7.26□□□□□ -1.25
LSM6YDR378C TY4B-PA0A0B7P3V8 1104 aa7.25□□□□□ -1.25
LSM6YDR378C TAF13P11747 167 aa7.25□□□□□ -1.25
LSM6YDR378C VMA4P22203 233 aaKnown RBP7.25□□□□□ -1.25
LSM6YDR378C EXO5P38289 585 aa7.25□□□□□ -1.25
LSM6YDR378C RTT10Q08924 1013 aa7.25□□□□□ -1.25
LSM6YDR378C TY4A-HQ6Q5P6 413 aa7.25□□□□□ -1.25
LSM6YDR378C AI1P03875 834 aa7.24□□□□□ -1.25
LSM6YDR378C CDC34P14682 295 aa7.24□□□□□ -1.25
LSM6YDR378C SEC23P15303 768 aaKnown RBP7.24□□□□□ -1.25
LSM6YDR378C ATG14P38270 344 aa7.24□□□□□ -1.25
LSM6YDR378C MTR4P47047 1073 aaKnown RBP7.24□□□□□ -1.25
LSM6YDR378C TMA46Q12000 345 aaKnown RBP7.24□□□□□ -1.25
LSM6YDR378C YLL054CQ12244 843 aa7.24□□□□□ -1.25
LSM6YDR378C TRK2P28584 889 aa7.23□□□□□ -1.25
LSM6YDR378C POL5P39985 1022 aaKnown RBP7.23□□□□□ -1.25
LSM6YDR378C YNR014WP53719 212 aa7.23□□□□□ -1.25
LSM6YDR378C FAR11P53917 953 aa7.23□□□□□ -1.25
LSM6YDR378C YMR074CQ04773 145 aa7.23□□□□□ -1.25
LSM6YDR378C MAE1P36013 669 aaKnown RBP7.22□□□□□ -1.25
LSM6YDR378C ARL1P38116 183 aaKnown RBP7.22□□□□□ -1.25
LSM6YDR378C BOI2P39969 1040 aa7.22□□□□□ -1.25
LSM6YDR378C NNF1P47149 201 aa7.22□□□□□ -1.25
LSM6YDR378C GCV1P48015 400 aa7.22□□□□□ -1.25
LSM6YDR378C DSE4P53753 1117 aa7.22□□□□□ -1.25
LSM6YDR378C MEC3Q02574 474 aa7.22□□□□□ -1.25
LSM6YDR378C GDE1Q02979 1223 aa7.22□□□□□ -1.25
LSM6YDR378C ELG1Q12050 791 aa7.22□□□□□ -1.25
LSM6YDR378C WRS1Q12109 432 aaKnown RBP7.22□□□□□ -1.25
LSM6YDR378C TY1A-LR4P0C2I8 440 aaKnown RBP7.21□□□□□ -1.26
LSM6YDR378C TY1A-DR6P0CX70 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-ER1P0CX71 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-LR2P0CX72 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-PLP0CX73 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-JR1P0CX74 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-LR3P0CX75 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-ML2P0CX76 440 aa7.21□□□□□ -1.26
LSM6YDR378C HDA2Q06629 674 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-GR1Q12085 440 aa7.21□□□□□ -1.26
LSM6YDR378C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.21□□□□□ -1.26
LSM6YDR378C TY1A-OLQ92392 440 aaKnown RBP7.21□□□□□ -1.26
LSM6YDR378C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
LSM6YDR378C REI1P38344 393 aaPredicted RBP7.2□□□□□ -1.26
LSM6YDR378C SLS1P42900 643 aa7.2□□□□□ -1.26
LSM6YDR378C RDH54P38086 958 aa7.19□□□□□ -1.26
LSM6YDR378C NEM1P38757 446 aa7.19□□□□□ -1.26
LSM6YDR378C RRM3P38766 723 aa7.19□□□□□ -1.26
LSM6YDR378C SIW14P53965 281 aa7.19□□□□□ -1.26
LSM6YDR378C EST2Q06163 884 aa7.19□□□□□ -1.26
LSM6YDR378C HEM13P11353 328 aaKnown RBP7.18□□□□□ -1.26
LSM6YDR378C DUT1P33317 147 aa7.18□□□□□ -1.26
LSM6YDR378C ADD66P36040 267 aa7.18□□□□□ -1.26
LSM6YDR378C ENT3P47160 408 aa7.18□□□□□ -1.26
LSM6YDR378C FAA4P47912 694 aaKnown RBP7.18□□□□□ -1.26
LSM6YDR378C YPL062WQ02781 134 aa7.18□□□□□ -1.26
LSM6YDR378C UTP5Q04177 643 aaKnown RBP7.18□□□□□ -1.26
LSM6YDR378C THI72Q08579 599 aa7.18□□□□□ -1.26
LSM6YDR378C SBE2P42223 864 aaKnown RBP7.17□□□□□ -1.26
LSM6YDR378C YGR053CP53234 283 aa7.17□□□□□ -1.26
LSM6YDR378C AVO1Q08236 1176 aa7.17□□□□□ -1.26
LSM6YDR378C REC8Q12188 680 aa7.17□□□□□ -1.26
LSM6YDR378C DED1P06634 604 aaKnown RBP7.16□□□□□ -1.26
LSM6YDR378C ERS1P17261 260 aa7.16□□□□□ -1.26
LSM6YDR378C GNP1P48813 663 aa7.16□□□□□ -1.26
LSM6YDR378C KRI1P42846 591 aaKnown RBP7.15□□□□□ -1.26
LSM6YDR378C ROD1Q02805 837 aa7.15□□□□□ -1.26
LSM6YDR378C LAP2Q10740 671 aa7.15□□□□□ -1.26
LSM6YDR378C ALG6Q12001 544 aaKnown RBP7.15□□□□□ -1.26
LSM6YDR378C KIP3P53086 805 aaKnown RBP7.14□□□□□ -1.27
LSM6YDR378C YNR063WP53749 607 aa7.14□□□□□ -1.27
LSM6YDR378C RKM2Q03942 479 aa7.14□□□□□ -1.27
LSM6YDR378C YOR223WQ12015 292 aa7.14□□□□□ -1.27
LSM6YDR378C FAL1Q12099 399 aaKnown RBP7.14□□□□□ -1.27
LSM6YDR378C RER2P35196 286 aa7.13□□□□□ -1.27
LSM6YDR378C OCA5P38738 679 aa7.13□□□□□ -1.27
LSM6YDR378C HSE1P38753 452 aa7.13□□□□□ -1.27
LSM6YDR378C HXT13P39924 564 aa7.13□□□□□ -1.27
LSM6YDR378C TYW3P53177 273 aa7.13□□□□□ -1.27
LSM6YDR378C HXT17P53631 564 aa7.13□□□□□ -1.27
LSM6YDR378C HXT15P54854 567 aa7.13□□□□□ -1.27
LSM6YDR378C SPO20Q04359 397 aa7.13□□□□□ -1.27
LSM6YDR378C OPI10Q08202 246 aa7.13□□□□□ -1.27
LSM6YDR378C SSF2Q12153 453 aaPredicted RBP7.13□□□□□ -1.27
LSM6YDR378C PRI2P20457 528 aa7.12□□□□□ -1.27
LSM6YDR378C YAR028WP39548 234 aa7.12□□□□□ -1.27
LSM6YDR378C SPO74P45819 413 aa7.12□□□□□ -1.27
LSM6YDR378C NSG2P53898 299 aa7.12□□□□□ -1.27
LSM6YDR378C EEB1Q02891 456 aa7.12□□□□□ -1.27
LSM6YDR378C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms