RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	FAA3	P39002	694 aa		6.76	□□□□□ -1.33
HIM1	YDR317W	NCE103	P53615	221 aa		6.76	□□□□□ -1.33
HIM1	YDR317W	YCS4	Q06156	1176 aa		6.76	□□□□□ -1.33
HIM1	YDR317W	PRP40	P33203	583 aa	Known RBP	6.75	□□□□□ -1.33
HIM1	YDR317W	DAL4	Q04895	635 aa		6.75	□□□□□ -1.33
HIM1	YDR317W	PMT7	Q06644	662 aa		6.75	□□□□□ -1.33
HIM1	YDR317W	RSC6	P25632	483 aa		6.74	□□□□□ -1.33
HIM1	YDR317W	AKR1	P39010	764 aa		6.74	□□□□□ -1.33
HIM1	YDR317W	YIG1	Q08956	461 aa		6.74	□□□□□ -1.33
HIM1	YDR317W	GCD6	P32501	712 aa	Known RBP	6.73	□□□□□ -1.33
HIM1	YDR317W	VPS35	P34110	944 aa		6.73	□□□□□ -1.33
HIM1	YDR317W	YMR074C	Q04773	145 aa		6.73	□□□□□ -1.33
HIM1	YDR317W	SLD2	P34252	453 aa		6.72	□□□□□ -1.33
HIM1	YDR317W	RVS167	P39743	482 aa	Known RBP	6.72	□□□□□ -1.33
HIM1	YDR317W	RRP15	Q06511	250 aa	Predicted RBP	6.72	□□□□□ -1.33
HIM1	YDR317W	ALG6	Q12001	544 aa	Known RBP	6.72	□□□□□ -1.33
HIM1	YDR317W	EXO5	P38289	585 aa		6.71	□□□□□ -1.34
HIM1	YDR317W	POL32	P47110	350 aa		6.71	□□□□□ -1.34
HIM1	YDR317W	UTP22	P53254	1237 aa	Predicted RBP	6.71	□□□□□ -1.34
HIM1	YDR317W	ULP1	Q02724	621 aa		6.71	□□□□□ -1.34
HIM1	YDR317W	YLR122C	Q12312	125 aa		6.7	□□□□□ -1.34
HIM1	YDR317W	INO80	P53115	1489 aa		6.7	□□□□□ -1.34
HIM1	YDR317W	MCM2	P29469	868 aa		6.69	□□□□□ -1.34
HIM1	YDR317W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	6.69	□□□□□ -1.34	not detected
HIM1	YDR317W	HXK1	P04806	485 aa	Known RBP	6.68	□□□□□ -1.34
HIM1	YDR317W	GPT2	P36148	743 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	NEM1	P38757	446 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	SLS1	P42900	643 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	GCV1	P48015	400 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	FAR11	P53917	953 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	MEC3	Q02574	474 aa		6.68	□□□□□ -1.34
HIM1	YDR317W	COQ2	P32378	372 aa		6.67	□□□□□ -1.34
HIM1	YDR317W	FYV10	P40492	516 aa		6.67	□□□□□ -1.34
HIM1	YDR317W	PEX13	P80667	386 aa		6.67	□□□□□ -1.34
HIM1	YDR317W	DOT1	Q04089	582 aa	Known RBP	6.67	□□□□□ -1.34
HIM1	YDR317W	YOR223W	Q12015	292 aa		6.67	□□□□□ -1.34
HIM1	YDR317W	TRP3	P00937	484 aa		6.66	□□□□□ -1.34
HIM1	YDR317W	HEM13	P11353	328 aa	Known RBP	6.66	□□□□□ -1.34
HIM1	YDR317W	MSH3	P25336	1018 aa		6.66	□□□□□ -1.34
HIM1	YDR317W	REI1	P38344	393 aa	Predicted RBP	6.66	□□□□□ -1.34
HIM1	YDR317W	SAF1	P38352	637 aa		6.66	□□□□□ -1.34
HIM1	YDR317W	ALO1	P54783	526 aa	Known RBP	6.66	□□□□□ -1.34
HIM1	YDR317W	SPR28	Q04921	423 aa		6.66	□□□□□ -1.34
HIM1	YDR317W	OXR1	Q08952	273 aa		6.66	□□□□□ -1.34
HIM1	YDR317W	SBP1	P10080	294 aa	Known RBP	6.65	□□□□□ -1.34
HIM1	YDR317W	PIC2	P40035	300 aa		6.65	□□□□□ -1.34
HIM1	YDR317W	NOG1	Q02892	647 aa	Known RBP	6.65	□□□□□ -1.34
HIM1	YDR317W	YPL109C	Q02981	657 aa		6.65	□□□□□ -1.34
HIM1	YDR317W	GLT1	Q12680	2145 aa	Known RBP	6.64	□□□□□ -1.35
HIM1	YDR317W	YKR073C	P36153	106 aa		6.64	□□□□□ -1.35
HIM1	YDR317W	RPS26A	P39938	119 aa	Known RBP	6.64	□□□□□ -1.35
HIM1	YDR317W	RPS26B	P39939	119 aa	Known RBP	6.64	□□□□□ -1.35
HIM1	YDR317W	SPO74	P45819	413 aa		6.64	□□□□□ -1.35
HIM1	YDR317W	RSM26	P47141	266 aa		6.64	□□□□□ -1.35
HIM1	YDR317W	MON2	P48563	1636 aa	Predicted RBP	6.64	□□□□□ -1.35
HIM1	YDR317W	PEX28	P38848	579 aa		6.63	□□□□□ -1.35
HIM1	YDR317W	YGR130C	P53278	816 aa		6.63	□□□□□ -1.35
HIM1	YDR317W	ADI1	Q03677	179 aa		6.63	□□□□□ -1.35
HIM1	YDR317W	HEM3	P28789	327 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	YKL077W	P36081	392 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	KAE1	P36132	386 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	YJR107W	P47145	328 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	YGR045C	P53229	120 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	ELA1	P53861	379 aa	Predicted RBP	6.62	□□□□□ -1.35
HIM1	YDR317W	GIC2	Q06648	383 aa		6.62	□□□□□ -1.35
HIM1	YDR317W	KAR2	P16474	682 aa	Known RBP	6.61	□□□□□ -1.35
HIM1	YDR317W	WHI3	P34761	661 aa	Known RBP	6.61	□□□□□ -1.35
HIM1	YDR317W	SQT1	P35184	431 aa		6.61	□□□□□ -1.35
HIM1	YDR317W	YGR122W	P53272	402 aa		6.61	□□□□□ -1.35
HIM1	YDR317W	EAR1	Q03212	550 aa		6.61	□□□□□ -1.35
HIM1	YDR317W	UTP5	Q04177	643 aa	Known RBP	6.61	□□□□□ -1.35
HIM1	YDR317W	CHS2	P14180	963 aa		6.6	□□□□□ -1.35
HIM1	YDR317W	CYC8	P14922	966 aa		6.6	□□□□□ -1.35
HIM1	YDR317W	MSH4	P40965	878 aa	Predicted RBP	6.6	□□□□□ -1.35
HIM1	YDR317W	YGL140C	P53120	1219 aa		6.6	□□□□□ -1.35
HIM1	YDR317W	SEC8	P32855	1065 aa		6.59	□□□□□ -1.35
HIM1	YDR317W	SEA4	P38164	1038 aa		6.59	□□□□□ -1.35
HIM1	YDR317W	MGE1	P38523	228 aa		6.59	□□□□□ -1.35
HIM1	YDR317W	XKS1	P42826	600 aa		6.59	□□□□□ -1.35
HIM1	YDR317W	RAD2	P07276	1031 aa		6.58	□□□□□ -1.36
HIM1	YDR317W	RDH54	P38086	958 aa		6.58	□□□□□ -1.36
HIM1	YDR317W	NMD3	P38861	518 aa	Known RBP	6.58	□□□□□ -1.36
HIM1	YDR317W	SHU2	P38957	223 aa		6.58	□□□□□ -1.36
HIM1	YDR317W	YLL054C	Q12244	843 aa		6.58	□□□□□ -1.36
HIM1	YDR317W	PRE9	P23638	258 aa	Known RBP	6.57	□□□□□ -1.36
HIM1	YDR317W	YNR063W	P53749	607 aa		6.57	□□□□□ -1.36
HIM1	YDR317W	GCD1	P09032	578 aa	Predicted RBP	6.56	□□□□□ -1.36
HIM1	YDR317W	SEC23	P15303	768 aa	Known RBP	6.56	□□□□□ -1.36
HIM1	YDR317W	TOS1	P38288	455 aa		6.56	□□□□□ -1.36
HIM1	YDR317W	INP52	P50942	1183 aa		6.56	□□□□□ -1.36
HIM1	YDR317W	OYE2	Q03558	400 aa	Known RBP	6.56	□□□□□ -1.36
HIM1	YDR317W	AVO1	Q08236	1176 aa		6.56	□□□□□ -1.36
HIM1	YDR317W	CYC7	P00045	113 aa		6.55	□□□□□ -1.36
HIM1	YDR317W	RPS4A	P0CX35	261 aa	Known RBP	6.55	□□□□□ -1.36
HIM1	YDR317W	RPS4B	P0CX36	261 aa	Known RBP	6.55	□□□□□ -1.36
HIM1	YDR317W	OMA1	P36163	345 aa		6.55	□□□□□ -1.36
HIM1	YDR317W	ARL1	P38116	183 aa	Known RBP	6.55	□□□□□ -1.36
HIM1	YDR317W	MTR4	P47047	1073 aa	Known RBP	6.55	□□□□□ -1.36
HIM1	YDR317W	CTH1	P47976	325 aa		6.55	□□□□□ -1.36
HIM1	YDR317W	ALT1	P52893	592 aa		6.55	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 76.5 ms