RNA–Protein interactions for RNA: YDL168W

SFA1, Transcript of Bifunctional alcohol dehydrogenase and formaldehyde dehydrogenase, yeast

Gene SFA1, Length 1,161 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFA1	YDL168W	RPL8B	P29453	256 aa	Known RBP	11.56	□□□□□ -0.56
SFA1	YDL168W	UBP9	P39967	754 aa		11.56	□□□□□ -0.56
SFA1	YDL168W	ENT3	P47160	408 aa		11.56	□□□□□ -0.56
SFA1	YDL168W	CTF18	P49956	741 aa		11.56	□□□□□ -0.56
SFA1	YDL168W	VPS20	Q04272	221 aa		11.56	□□□□□ -0.56
SFA1	YDL168W	NUC1	P08466	329 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	MATALPHA2	P0CY08	210 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	HMLALPHA2	P0CY09	210 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	OCT1	P35999	772 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	OPY1	P38271	328 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	NPA3	P47122	385 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	YKE2	P52553	114 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	SUE1	Q06524	206 aa		11.55	□□□□□ -0.56
SFA1	YDL168W	ERG12	P07277	443 aa		11.54	□□□□□ -0.56
SFA1	YDL168W	PCT1	P13259	424 aa		11.54	□□□□□ -0.56
SFA1	YDL168W	BSD2	P38356	321 aa		11.54	□□□□□ -0.56
SFA1	YDL168W	YJL007C	P47080	104 aa		11.54	□□□□□ -0.56
SFA1	YDL168W	HCA4	P20448	770 aa	Known RBP	11.53	□□□□□ -0.56
SFA1	YDL168W	YML037C	Q03703	340 aa		11.53	□□□□□ -0.56
SFA1	YDL168W	RNR3	P21672	869 aa	Known RBP	11.52	□□□□□ -0.57
SFA1	YDL168W	SIS2	P36024	562 aa		11.52	□□□□□ -0.57
SFA1	YDL168W	MAL31	P38156	614 aa		11.52	□□□□□ -0.57
SFA1	YDL168W	MDM1	Q01846	1127 aa		11.52	□□□□□ -0.57
SFA1	YDL168W	RPL19A	P0CX82	189 aa	Known RBP	11.51	□□□□□ -0.57
SFA1	YDL168W	RPL19B	P0CX83	189 aa	Predicted RBP	11.51	□□□□□ -0.57
SFA1	YDL168W	SWI4	P25302	1093 aa	Known RBP	11.51	□□□□□ -0.57
SFA1	YDL168W	VPS45	P38932	577 aa		11.51	□□□□□ -0.57
SFA1	YDL168W	LYS14	P40971	790 aa		11.51	□□□□□ -0.57
SFA1	YDL168W	ALG2	P43636	503 aa		11.51	□□□□□ -0.57
SFA1	YDL168W	JIP4	Q03361	876 aa		11.51	□□□□□ -0.57
SFA1	YDL168W	YLR407W	Q06070	228 aa		11.51	□□□□□ -0.57
SFA1	YDL168W	SUB2	Q07478	446 aa	Known RBP	11.51	□□□□□ -0.57
SFA1	YDL168W	IXR1	P33417	597 aa		11.5	□□□□□ -0.57
SFA1	YDL168W	RPN10	P38886	268 aa	Known RBP	11.5	□□□□□ -0.57
SFA1	YDL168W	RRD1	P40454	393 aa	Known RBP	11.5	□□□□□ -0.57
SFA1	YDL168W	RBA50	Q04418	439 aa		11.5	□□□□□ -0.57
SFA1	YDL168W	CST9	Q06032	482 aa		11.5	□□□□□ -0.57
SFA1	YDL168W	DSE3	Q08729	430 aa		11.5	□□□□□ -0.57
SFA1	YDL168W	MET6	P05694	767 aa	Known RBP	11.49	□□□□□ -0.57
SFA1	YDL168W	STI1	P15705	589 aa	Known RBP RIP-Chip data	11.49	□□□□□ -0.57	not detected
SFA1	YDL168W	ASH1	P34233	588 aa		11.49	□□□□□ -0.57
SFA1	YDL168W	APE3	P37302	537 aa	Known RBP	11.49	□□□□□ -0.57
SFA1	YDL168W	YHL017W	P38745	532 aa		11.49	□□□□□ -0.57
SFA1	YDL168W	NDT80	P38830	627 aa		11.49	□□□□□ -0.57
SFA1	YDL168W	SOL4	P53315	255 aa		11.49	□□□□□ -0.57
SFA1	YDL168W	UTP4	Q06679	776 aa	Known RBP	11.49	□□□□□ -0.57
SFA1	YDL168W	UBX5	Q06682	500 aa		11.49	□□□□□ -0.57
SFA1	YDL168W	CLF1	Q12309	687 aa	Predicted RBP	11.49	□□□□□ -0.57
SFA1	YDL168W	BMH2	P34730	273 aa	Known RBP	11.48	□□□□□ -0.57
SFA1	YDL168W	MOT2	P34909	587 aa	Known RBP	11.48	□□□□□ -0.57
SFA1	YDL168W	PES4	P39684	611 aa		11.48	□□□□□ -0.57
SFA1	YDL168W	PCI8	P40512	444 aa		11.48	□□□□□ -0.57
SFA1	YDL168W	NET1	P47035	1189 aa		11.48	□□□□□ -0.57
SFA1	YDL168W	DUS1	P53759	423 aa	Known RBP	11.48	□□□□□ -0.57
SFA1	YDL168W	UBP10	P53874	792 aa	Predicted RBP	11.48	□□□□□ -0.57
SFA1	YDL168W	YDR341C	Q05506	607 aa	Known RBP	11.48	□□□□□ -0.57
SFA1	YDL168W	CPA2	P03965	1118 aa	Known RBP	11.47	□□□□□ -0.57
SFA1	YDL168W	RAD18	P10862	487 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	VPS1	P21576	704 aa	Known RBP	11.47	□□□□□ -0.57
SFA1	YDL168W	MCD4	P36051	919 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	RXT2	P38255	430 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	VAB2	P40003	282 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	ASE1	P50275	885 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	PSK2	Q08217	1101 aa		11.47	□□□□□ -0.57
SFA1	YDL168W	CIT1	P00890	479 aa		11.46	□□□□□ -0.57
SFA1	YDL168W	PER1	P25625	357 aa		11.46	□□□□□ -0.57
SFA1	YDL168W	PHO88	P38264	188 aa	Predicted RBP	11.46	□□□□□ -0.57
SFA1	YDL168W	BUD6	P41697	788 aa		11.46	□□□□□ -0.57
SFA1	YDL168W	YGL081W	P53156	320 aa		11.46	□□□□□ -0.57
SFA1	YDL168W	ELG1	Q12050	791 aa		11.46	□□□□□ -0.57
SFA1	YDL168W	CFT2	Q12102	859 aa	Predicted RBP	11.46	□□□□□ -0.57
SFA1	YDL168W	TIF6	Q12522	245 aa	Known RBP	11.46	□□□□□ -0.57
SFA1	YDL168W	MYO1	P08964	1928 aa		11.46	□□□□□ -0.58
SFA1	YDL168W	CDC6	P09119	513 aa		11.45	□□□□□ -0.58
SFA1	YDL168W	SAM1	P10659	382 aa	Known RBP	11.45	□□□□□ -0.58
SFA1	YDL168W	DIT2	P21595	489 aa		11.45	□□□□□ -0.58
SFA1	YDL168W	TOM71	P38825	639 aa	Known RBP	11.45	□□□□□ -0.58
SFA1	YDL168W	GIS4	Q04233	774 aa		11.45	□□□□□ -0.58
SFA1	YDL168W	TMA64	Q04600	565 aa	Known RBP	11.45	□□□□□ -0.58
SFA1	YDL168W	HSP82	P02829	709 aa	Known RBP	11.44	□□□□□ -0.58
SFA1	YDL168W	RFC5	P38251	354 aa		11.44	□□□□□ -0.58
SFA1	YDL168W	ERG7	P38604	731 aa		11.44	□□□□□ -0.58
SFA1	YDL168W	YPL150W	Q12152	901 aa		11.44	□□□□□ -0.58
SFA1	YDL168W	BIK1	P11709	440 aa		11.43	□□□□□ -0.58
SFA1	YDL168W	CBP3	P21560	335 aa		11.43	□□□□□ -0.58
SFA1	YDL168W	TGL1	P34163	548 aa		11.43	□□□□□ -0.58
SFA1	YDL168W	PRX1	P34227	261 aa	Known RBP	11.43	□□□□□ -0.58
SFA1	YDL168W	GDE1	Q02979	1223 aa		11.43	□□□□□ -0.58
SFA1	YDL168W	HRQ1	Q05549	1077 aa		11.43	□□□□□ -0.58
SFA1	YDL168W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	11.42	□□□□□ -0.58	not detected
SFA1	YDL168W	RSC30	P38781	883 aa		11.42	□□□□□ -0.58
SFA1	YDL168W	LSB1	P53281	241 aa		11.42	□□□□□ -0.58
SFA1	YDL168W	ALD6	P54115	500 aa	Known RBP	11.42	□□□□□ -0.58
SFA1	YDL168W	SMD2	Q06217	110 aa	Known RBP	11.42	□□□□□ -0.58
SFA1	YDL168W	VIP1	Q06685	1146 aa	Known RBP	11.42	□□□□□ -0.58
SFA1	YDL168W	VMA2	P16140	517 aa	Known RBP	11.41	□□□□□ -0.58
SFA1	YDL168W	CDC60	P26637	1090 aa	Known RBP	11.41	□□□□□ -0.58
SFA1	YDL168W	UTR4	P32626	227 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	SHP1	P34223	423 aa		11.41	□□□□□ -0.58
SFA1	YDL168W	TTI1	P36097	1038 aa		11.41	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms