RNA–Protein interactions for RNA: YBR165W

UBS1, Transcript of Ubiquitin-conjugating enzyme suppressor that regulates Cdc34p, yeast

Gene UBS1, Length 834 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBS1	YBR165W	NOG1	Q02892	647 aa	Known RBP	7.47	□□□□□ -1.21
UBS1	YBR165W	OXR1	Q08952	273 aa		7.47	□□□□□ -1.21
UBS1	YBR165W	YOR223W	Q12015	292 aa		7.47	□□□□□ -1.21
UBS1	YBR165W	TOS4	Q06266	489 aa		7.46	□□□□□ -1.22
UBS1	YBR165W	KAR2	P16474	682 aa	Known RBP	7.45	□□□□□ -1.22
UBS1	YBR165W	RPT1	P33299	467 aa	Known RBP	7.45	□□□□□ -1.22
UBS1	YBR165W	ARL1	P38116	183 aa	Known RBP	7.45	□□□□□ -1.22
UBS1	YBR165W	EXO5	P38289	585 aa		7.45	□□□□□ -1.22
UBS1	YBR165W	SAF1	P38352	637 aa		7.45	□□□□□ -1.22
UBS1	YBR165W	SHU2	P38957	223 aa		7.45	□□□□□ -1.22
UBS1	YBR165W	DAL4	Q04895	635 aa		7.45	□□□□□ -1.22
UBS1	YBR165W	TY1A-LR4	P0C2I8	440 aa	Known RBP	7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-DR6	P0CX70	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-ER1	P0CX71	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-LR2	P0CX72	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-PL	P0CX73	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-JR1	P0CX74	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-LR3	P0CX75	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-ML2	P0CX76	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	COQ2	P32378	372 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	ULP1	Q02724	621 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	YMR074C	Q04773	145 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-GR1	Q12085	440 aa		7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	7.44	□□□□□ -1.22
UBS1	YBR165W	TY1A-OL	Q92392	440 aa	Known RBP	7.44	□□□□□ -1.22
UBS1	YBR165W	HXK1	P04806	485 aa	Known RBP	7.43	□□□□□ -1.22
UBS1	YBR165W	SBP1	P10080	294 aa	Known RBP	7.43	□□□□□ -1.22
UBS1	YBR165W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.43	□□□□□ -1.22	not detected
UBS1	YBR165W	YLR122C	Q12312	125 aa		7.43	□□□□□ -1.22
UBS1	YBR165W	NAM7	P30771	971 aa	Known RBP	7.42	□□□□□ -1.22
UBS1	YBR165W	UGA4	P32837	571 aa		7.42	□□□□□ -1.22
UBS1	YBR165W	YKL077W	P36081	392 aa		7.42	□□□□□ -1.22
UBS1	YBR165W	POL32	P47110	350 aa		7.42	□□□□□ -1.22
UBS1	YBR165W	RRP15	Q06511	250 aa	Predicted RBP	7.42	□□□□□ -1.22
UBS1	YBR165W	ATE1	P16639	503 aa		7.41	□□□□□ -1.22
UBS1	YBR165W	KAE1	P36132	386 aa		7.41	□□□□□ -1.22
UBS1	YBR165W	REI1	P38344	393 aa	Predicted RBP	7.41	□□□□□ -1.22
UBS1	YBR165W	AKR1	P39010	764 aa		7.41	□□□□□ -1.22
UBS1	YBR165W	YPL109C	Q02981	657 aa		7.41	□□□□□ -1.22
UBS1	YBR165W	GIC2	Q06648	383 aa		7.41	□□□□□ -1.22
UBS1	YBR165W	CHS2	P14180	963 aa		7.4	□□□□□ -1.22
UBS1	YBR165W	FAA3	P39002	694 aa		7.4	□□□□□ -1.22
UBS1	YBR165W	YGR122W	P53272	402 aa		7.4	□□□□□ -1.22
UBS1	YBR165W	ADI1	Q03677	179 aa		7.4	□□□□□ -1.22
UBS1	YBR165W	DOT1	Q04089	582 aa	Known RBP	7.4	□□□□□ -1.22
UBS1	YBR165W	MSH3	P25336	1018 aa		7.39	□□□□□ -1.23
UBS1	YBR165W	MGE1	P38523	228 aa		7.39	□□□□□ -1.23
UBS1	YBR165W	YJR107W	P47145	328 aa		7.39	□□□□□ -1.23
UBS1	YBR165W	GPT2	P36148	743 aa		7.38	□□□□□ -1.23
UBS1	YBR165W	ASF1	P32447	279 aa		7.37	□□□□□ -1.23
UBS1	YBR165W	NEM1	P38757	446 aa		7.37	□□□□□ -1.23
UBS1	YBR165W	SLS1	P42900	643 aa		7.37	□□□□□ -1.23
UBS1	YBR165W	ALG6	Q12001	544 aa	Known RBP	7.37	□□□□□ -1.23
UBS1	YBR165W	MSB1	P21339	1137 aa	Known RBP	7.36	□□□□□ -1.23
UBS1	YBR165W	VMA4	P22203	233 aa	Known RBP	7.36	□□□□□ -1.23
UBS1	YBR165W	SQT1	P35184	431 aa		7.36	□□□□□ -1.23
UBS1	YBR165W	PEX28	P38848	579 aa		7.36	□□□□□ -1.23
UBS1	YBR165W	RSM26	P47141	266 aa		7.36	□□□□□ -1.23
UBS1	YBR165W	PEX13	P80667	386 aa		7.36	□□□□□ -1.23
UBS1	YBR165W	RDH54	P38086	958 aa		7.35	□□□□□ -1.23
UBS1	YBR165W	YGR045C	P53229	120 aa		7.35	□□□□□ -1.23
UBS1	YBR165W	UTP5	Q04177	643 aa	Known RBP	7.35	□□□□□ -1.23
UBS1	YBR165W	TRP3	P00937	484 aa		7.34	□□□□□ -1.23
UBS1	YBR165W	MSH4	P40965	878 aa	Predicted RBP	7.34	□□□□□ -1.23
UBS1	YBR165W	SPO74	P45819	413 aa		7.34	□□□□□ -1.23
UBS1	YBR165W	MTR4	P47047	1073 aa	Known RBP	7.34	□□□□□ -1.23
UBS1	YBR165W	YGL140C	P53120	1219 aa		7.34	□□□□□ -1.23
UBS1	YBR165W	MED7	Q08278	222 aa		7.34	□□□□□ -1.23
UBS1	YBR165W	MCD1	Q12158	566 aa		7.34	□□□□□ -1.23
UBS1	YBR165W	GLT1	Q12680	2145 aa	Known RBP	7.33	□□□□□ -1.24
UBS1	YBR165W	RAD2	P07276	1031 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	CYC8	P14922	966 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	YKR073C	P36153	106 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	PIC2	P40035	300 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	INP52	P50942	1183 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	ALO1	P54783	526 aa	Known RBP	7.33	□□□□□ -1.24
UBS1	YBR165W	AVO1	Q08236	1176 aa		7.33	□□□□□ -1.24
UBS1	YBR165W	SEC23	P15303	768 aa	Known RBP	7.32	□□□□□ -1.24
UBS1	YBR165W	PRE9	P23638	258 aa	Known RBP	7.32	□□□□□ -1.24
UBS1	YBR165W	MMM1	P41800	426 aa		7.32	□□□□□ -1.24
UBS1	YBR165W	MRPS18	P42847	217 aa		7.32	□□□□□ -1.24
UBS1	YBR165W	ALT1	P52893	592 aa		7.32	□□□□□ -1.24
UBS1	YBR165W	YGR130C	P53278	816 aa		7.32	□□□□□ -1.24
UBS1	YBR165W	HEM13	P11353	328 aa	Known RBP	7.31	□□□□□ -1.24
UBS1	YBR165W	SMY2	P32909	740 aa	Known RBP	7.31	□□□□□ -1.24
UBS1	YBR165W	RPS26A	P39938	119 aa	Known RBP	7.31	□□□□□ -1.24
UBS1	YBR165W	RPS26B	P39939	119 aa	Known RBP	7.31	□□□□□ -1.24
UBS1	YBR165W	ELA1	P53861	379 aa	Predicted RBP	7.31	□□□□□ -1.24
UBS1	YBR165W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.3	□□□□□ -1.24	not detected
UBS1	YBR165W	RPS4A	P0CX35	261 aa	Known RBP	7.3	□□□□□ -1.24
UBS1	YBR165W	RPS4B	P0CX36	261 aa	Known RBP	7.3	□□□□□ -1.24
UBS1	YBR165W	TAF13	P11747	167 aa		7.3	□□□□□ -1.24
UBS1	YBR165W	NNK1	P36003	928 aa		7.3	□□□□□ -1.24
UBS1	YBR165W	YAR028W	P39548	234 aa		7.3	□□□□□ -1.24
UBS1	YBR165W	CIT3	P43635	486 aa		7.3	□□□□□ -1.24
UBS1	YBR165W	YOR059C	Q08448	450 aa	Known RBP	7.3	□□□□□ -1.24
UBS1	YBR165W	FYV10	P40492	516 aa		7.29	□□□□□ -1.24
UBS1	YBR165W	XKS1	P42826	600 aa		7.29	□□□□□ -1.24
UBS1	YBR165W	RKM2	Q03942	479 aa		7.29	□□□□□ -1.24
UBS1	YBR165W	CYC7	P00045	113 aa		7.28	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms