RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W BOL3P39724 118 aa5.98□□□□□ -1.45
CDC28YBR160W ADE12P80210 433 aaKnown RBP5.98□□□□□ -1.45
CDC28YBR160W CUS1Q02554 436 aaPredicted RBP5.98□□□□□ -1.45
CDC28YBR160W APC11Q12157 165 aa5.98□□□□□ -1.45
CDC28YBR160W DNF3Q12674 1656 aa5.98□□□□□ -1.45
CDC28YBR160W EDE1P34216 1381 aa5.97□□□□□ -1.45
CDC28YBR160W RAD2P07276 1031 aa5.97□□□□□ -1.45
CDC28YBR160W PCT1P13259 424 aa5.97□□□□□ -1.45
CDC28YBR160W BUD27P43573 796 aaKnown RBP RIP-Chip data5.97□□□□□ -1.45not detected
CDC28YBR160W HAT1Q12341 374 aa5.97□□□□□ -1.45
CDC28YBR160W LSO1Q3E827 93 aa5.97□□□□□ -1.45
CDC28YBR160W SIR4P11978 1358 aa5.96□□□□□ -1.45
CDC28YBR160W KRE5P22023 1365 aa5.96□□□□□ -1.45
CDC28YBR160W MPP10P47083 593 aaKnown RBP5.96□□□□□ -1.46
CDC28YBR160W TY1A-DR2Q03964 440 aaKnown RBP5.96□□□□□ -1.46
CDC28YBR160W FPS1P23900 669 aa5.95□□□□□ -1.46
CDC28YBR160W NAB2P32505 525 aaKnown RBP RIP-Chip data5.95□□□□□ -1.46not detected
CDC28YBR160W RPP1AP05318 106 aaPredicted RBP5.94□□□□□ -1.46
CDC28YBR160W VPS24P36095 224 aaKnown RBP5.94□□□□□ -1.46
CDC28YBR160W SSF1P38789 453 aaPredicted RBP5.94□□□□□ -1.46
CDC28YBR160W DYS1P38791 387 aa5.94□□□□□ -1.46
CDC28YBR160W SLN1P39928 1220 aaPredicted RBP5.94□□□□□ -1.46
CDC28YBR160W CHZ1P40019 153 aaPredicted RBP5.94□□□□□ -1.46
CDC28YBR160W TAF8Q03750 510 aa5.94□□□□□ -1.46
CDC28YBR160W YOR296WQ08748 1289 aa5.94□□□□□ -1.46
CDC28YBR160W LSP1Q12230 341 aaKnown RBP5.94□□□□□ -1.46
CDC28YBR160W GPM1P00950 247 aaKnown RBP5.93□□□□□ -1.46
CDC28YBR160W RPB10P22139 70 aa5.93□□□□□ -1.46
CDC28YBR160W BSD2P38356 321 aa5.93□□□□□ -1.46
CDC28YBR160W YIL092WP40497 633 aa5.93□□□□□ -1.46
CDC28YBR160W RRP46P53256 223 aaPredicted RBP5.93□□□□□ -1.46
CDC28YBR160W YNR040WP53736 256 aa5.93□□□□□ -1.46
CDC28YBR160W RGA2Q06407 1009 aa5.93□□□□□ -1.46
CDC28YBR160W MSP1P28737 362 aa5.92□□□□□ -1.46
CDC28YBR160W RRN6P32786 894 aa5.92□□□□□ -1.46
CDC28YBR160W LDH1P38139 375 aa5.92□□□□□ -1.46
CDC28YBR160W RTR1P40084 226 aaPredicted RBP5.92□□□□□ -1.46
CDC28YBR160W SAP155P43612 1002 aa5.92□□□□□ -1.46
CDC28YBR160W ITC1P53125 1264 aa5.92□□□□□ -1.46
CDC28YBR160W HEH2Q03281 663 aa5.92□□□□□ -1.46
CDC28YBR160W NAP1P25293 417 aaKnown RBP5.91□□□□□ -1.46
CDC28YBR160W HEM3P28789 327 aa5.91□□□□□ -1.46
CDC28YBR160W NCL1P38205 684 aaKnown RBP5.91□□□□□ -1.46
CDC28YBR160W APM2P38700 605 aa5.91□□□□□ -1.46
CDC28YBR160W HEF3P53978 1044 aaKnown RBP5.91□□□□□ -1.46
CDC28YBR160W AIM44Q99299 758 aa5.91□□□□□ -1.46
CDC28YBR160W RAD9P14737 1309 aa5.91□□□□□ -1.46
CDC28YBR160W FUR4P05316 633 aaKnown RBP5.9□□□□□ -1.46
CDC28YBR160W NOT3P06102 836 aaKnown RBP5.9□□□□□ -1.46
CDC28YBR160W PDC5P16467 563 aaKnown RBP5.9□□□□□ -1.46
CDC28YBR160W MSN1P22148 382 aa5.9□□□□□ -1.46
CDC28YBR160W KNS1P32350 737 aaPredicted RBP5.9□□□□□ -1.46
CDC28YBR160W GIP1P38229 639 aa5.9□□□□□ -1.46
CDC28YBR160W PRK1P40494 810 aa5.9□□□□□ -1.46
CDC28YBR160W POL32P47110 350 aa5.9□□□□□ -1.46
CDC28YBR160W SNU71P53207 620 aaKnown RBP5.9□□□□□ -1.46
CDC28YBR160W TAP42Q04372 366 aa5.9□□□□□ -1.46
CDC28YBR160W KAR5Q04746 504 aa5.9□□□□□ -1.46
CDC28YBR160W PRD1P25375 712 aa5.89□□□□□ -1.47
CDC28YBR160W IPL1P38991 367 aa5.89□□□□□ -1.47
CDC28YBR160W YER156CP40093 338 aaKnown RBP5.89□□□□□ -1.47
CDC28YBR160W HXT8P40886 569 aa5.89□□□□□ -1.47
CDC28YBR160W YFL066CP43538 392 aa5.89□□□□□ -1.47
CDC28YBR160W ATG1P53104 897 aa5.89□□□□□ -1.47
CDC28YBR160W THI22Q06490 572 aa5.89□□□□□ -1.47
CDC28YBR160W PSK1P31374 1356 aa5.89□□□□□ -1.47
CDC28YBR160W TRL1P09880 827 aaKnown RBP5.88□□□□□ -1.47
CDC28YBR160W IDI1P15496 288 aa5.88□□□□□ -1.47
CDC28YBR160W ISW1P38144 1129 aa5.88□□□□□ -1.47
CDC28YBR160W STM1P39015 273 aaKnown RBP5.88□□□□□ -1.47
CDC28YBR160W DJP1P40564 432 aa5.88□□□□□ -1.47
CDC28YBR160W AI1P03875 834 aa5.87□□□□□ -1.47
CDC28YBR160W DAL5P15365 543 aa5.87□□□□□ -1.47
CDC28YBR160W KAR2P16474 682 aaKnown RBP5.87□□□□□ -1.47
CDC28YBR160W TYS1P36421 394 aaKnown RBP5.87□□□□□ -1.47
CDC28YBR160W RGD2P43556 714 aa5.87□□□□□ -1.47
CDC28YBR160W SUT1P53032 299 aaKnown RBP5.87□□□□□ -1.47
CDC28YBR160W ECM16Q04217 1267 aaKnown RBP5.87□□□□□ -1.47
CDC28YBR160W URN1Q06525 465 aaKnown RBP5.87□□□□□ -1.47
CDC28YBR160W ARL1P38116 183 aaKnown RBP5.86□□□□□ -1.47
CDC28YBR160W SEN54Q02825 467 aaPredicted RBP5.86□□□□□ -1.47
CDC28YBR160W YBL113CQ7M4S9 792 aa5.86□□□□□ -1.47
CDC28YBR160W SEC20P28791 383 aa5.85□□□□□ -1.47
CDC28YBR160W GLO3P38682 493 aaKnown RBP5.85□□□□□ -1.47
CDC28YBR160W ERP5P38819 212 aa5.85□□□□□ -1.47
CDC28YBR160W NTA1P40354 457 aa5.85□□□□□ -1.47
CDC28YBR160W QDR1P40475 563 aa5.85□□□□□ -1.47
CDC28YBR160W AUS1Q08409 1394 aa5.84□□□□□ -1.47
CDC28YBR160W QCR6P00127 147 aa5.84□□□□□ -1.47
CDC28YBR160W YIL165CP40446 119 aa5.84□□□□□ -1.47
CDC28YBR160W SBE2P42223 864 aaKnown RBP5.84□□□□□ -1.47
CDC28YBR160W ACF4P47129 309 aa5.84□□□□□ -1.47
CDC28YBR160W EMG1Q06287 252 aaKnown RBP5.84□□□□□ -1.47
CDC28YBR160W MRP10O75012 95 aa5.83□□□□□ -1.48
CDC28YBR160W ASF1P32447 279 aa5.83□□□□□ -1.48
CDC28YBR160W GRX4P32642 244 aa5.83□□□□□ -1.48
CDC28YBR160W SMC1P32908 1225 aa5.83□□□□□ -1.48
CDC28YBR160W MDJ1P35191 511 aa5.83□□□□□ -1.48
CDC28YBR160W MDJ2P42834 146 aa5.83□□□□□ -1.48
CDC28YBR160W RTT109Q07794 436 aa5.83□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms