RNA–Protein interactions for RNA: YBR105C

VID24, Transcript of GID Complex regulatory subunit, yeast

Gene VID24, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID24	YBR105C	SMC1	P32908	1225 aa		5.01	□□□□□ -1.61
VID24	YBR105C	YIG1	Q08956	461 aa		5.01	□□□□□ -1.61
VID24	YBR105C	TAD3	Q9URQ3	322 aa		5.01	□□□□□ -1.61
VID24	YBR105C	PUP1	P25043	261 aa		5	□□□□□ -1.61
VID24	YBR105C	CWC15	Q03772	175 aa	Known RBP	4.99	□□□□□ -1.61
VID24	YBR105C	RPB10	P22139	70 aa		4.98	□□□□□ -1.61
VID24	YBR105C	TOD6	P34219	525 aa		4.98	□□□□□ -1.61
VID24	YBR105C	PTC7	P38797	343 aa		4.98	□□□□□ -1.61
VID24	YBR105C	MEC3	Q02574	474 aa		4.98	□□□□□ -1.61
VID24	YBR105C	YDL177C	Q12257	170 aa		4.98	□□□□□ -1.61
VID24	YBR105C	SOD2	P00447	233 aa		4.97	□□□□□ -1.61
VID24	YBR105C	NFS1	P25374	497 aa		4.97	□□□□□ -1.61
VID24	YBR105C	CPS1	P27614	576 aa		4.97	□□□□□ -1.61
VID24	YBR105C	ABZ1	P37254	787 aa	Predicted RBP	4.97	□□□□□ -1.61
VID24	YBR105C	ALG6	Q12001	544 aa	Known RBP	4.97	□□□□□ -1.61
VID24	YBR105C	HTS1	P07263	546 aa	Known RBP	4.96	□□□□□ -1.62
VID24	YBR105C	REI1	P38344	393 aa	Predicted RBP	4.96	□□□□□ -1.62
VID24	YBR105C	PNP1	Q05788	311 aa		4.96	□□□□□ -1.62
VID24	YBR105C	NPR1	P22211	790 aa		4.95	□□□□□ -1.62
VID24	YBR105C	GTS1	P40956	396 aa		4.95	□□□□□ -1.62
VID24	YBR105C	CTR9	P89105	1077 aa		4.95	□□□□□ -1.62
VID24	YBR105C	SMY2	P32909	740 aa	Known RBP	4.94	□□□□□ -1.62
VID24	YBR105C	ETP1	P38748	585 aa	Known RBP	4.94	□□□□□ -1.62
VID24	YBR105C	YPL277C	Q08989	487 aa		4.94	□□□□□ -1.62
VID24	YBR105C	TUB2	P02557	457 aa	Known RBP	4.93	□□□□□ -1.62
VID24	YBR105C	RPS13	P05756	151 aa	Known RBP	4.93	□□□□□ -1.62
VID24	YBR105C	SSA4	P22202	642 aa	Known RBP	4.93	□□□□□ -1.62
VID24	YBR105C	UTP22	P53254	1237 aa	Predicted RBP	4.93	□□□□□ -1.62
VID24	YBR105C	LSO1	Q3E827	93 aa		4.93	□□□□□ -1.62
VID24	YBR105C	RIM11	P38615	370 aa		4.92	□□□□□ -1.62
VID24	YBR105C	CLU1	Q03690	1277 aa	Known RBP	4.92	□□□□□ -1.62
VID24	YBR105C	PNS1	Q12412	539 aa		4.92	□□□□□ -1.62
VID24	YBR105C	CMR1	Q12510	522 aa	Known RBP	4.92	□□□□□ -1.62
VID24	YBR105C	NNK1	P36003	928 aa		4.91	□□□□□ -1.62
VID24	YBR105C	SHM2	P37291	469 aa	Known RBP	4.91	□□□□□ -1.62
VID24	YBR105C	YGR045C	P53229	120 aa		4.91	□□□□□ -1.62
VID24	YBR105C	ELA1	P53861	379 aa	Predicted RBP	4.91	□□□□□ -1.62
VID24	YBR105C	YLR358C	O13565	187 aa		4.9	□□□□□ -1.63
VID24	YBR105C	COB	P00163	385 aa		4.9	□□□□□ -1.63
VID24	YBR105C	PRP5	P21372	849 aa	Predicted RBP	4.9	□□□□□ -1.63
VID24	YBR105C	ECM2	P38241	364 aa	Known RBP	4.9	□□□□□ -1.63
VID24	YBR105C	YML083C	Q04526	418 aa		4.9	□□□□□ -1.63
VID24	YBR105C	YPT53	P36019	220 aa		4.89	□□□□□ -1.63
VID24	YBR105C	SNO2	P53823	222 aa		4.89	□□□□□ -1.63
VID24	YBR105C	AVO1	Q08236	1176 aa		4.89	□□□□□ -1.63
VID24	YBR105C	CTS1	P29029	562 aa		4.88	□□□□□ -1.63
VID24	YBR105C	FOL2	P51601	243 aa	Known RBP	4.88	□□□□□ -1.63
VID24	YBR105C	PUS7	Q08647	676 aa	Known RBP	4.87	□□□□□ -1.63
VID24	YBR105C	FUR4	P05316	633 aa	Known RBP	4.86	□□□□□ -1.63
VID24	YBR105C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
VID24	YBR105C	DUR3	P33413	735 aa		4.86	□□□□□ -1.63
VID24	YBR105C	SUB2	Q07478	446 aa	Known RBP	4.86	□□□□□ -1.63
VID24	YBR105C	TPP1	Q03796	238 aa		4.85	□□□□□ -1.63
VID24	YBR105C	SSA1	P10591	642 aa	Known RBP	4.84	□□□□□ -1.63
VID24	YBR105C	ARL1	P38116	183 aa	Known RBP	4.84	□□□□□ -1.63
VID24	YBR105C	RPL34A	P87262	121 aa	Predicted RBP	4.83	□□□□□ -1.64
VID24	YBR105C	NOB1	Q08444	459 aa	Known RBP	4.83	□□□□□ -1.64
VID24	YBR105C	RSC4	Q02206	625 aa		4.82	□□□□□ -1.64
VID24	YBR105C	YHL012W	P38709	493 aa		4.81	□□□□□ -1.64
VID24	YBR105C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
VID24	YBR105C	SAM35	P14693	329 aa		4.8	□□□□□ -1.64
VID24	YBR105C	TAT2	P38967	592 aa		4.8	□□□□□ -1.64
VID24	YBR105C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-DR6	P0CX70	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-ER1	P0CX71	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-LR2	P0CX72	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-PL	P0CX73	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-JR1	P0CX74	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-LR3	P0CX75	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-ML2	P0CX76	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	MDL2	P33311	773 aa		4.79	□□□□□ -1.64
VID24	YBR105C	GEF1	P37020	779 aa		4.79	□□□□□ -1.64
VID24	YBR105C	BOL3	P39724	118 aa		4.79	□□□□□ -1.64
VID24	YBR105C	SAP155	P43612	1002 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-GR1	Q12085	440 aa		4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.79	□□□□□ -1.64
VID24	YBR105C	TY1A-OL	Q92392	440 aa	Known RBP	4.79	□□□□□ -1.64
VID24	YBR105C	AIM26	P32858	118 aa		4.77	□□□□□ -1.65
VID24	YBR105C	NMD3	P38861	518 aa	Known RBP	4.77	□□□□□ -1.65
VID24	YBR105C	YAF9	P53930	226 aa		4.77	□□□□□ -1.65
VID24	YBR105C	UFD2	P54860	961 aa		4.77	□□□□□ -1.65
VID24	YBR105C	PMT7	Q06644	662 aa		4.77	□□□□□ -1.65
VID24	YBR105C	PUS9	Q12069	462 aa		4.77	□□□□□ -1.65
VID24	YBR105C	RET1	P22276	1149 aa	Known RBP	4.76	□□□□□ -1.65
VID24	YBR105C	TRM2	P33753	639 aa		4.76	□□□□□ -1.65
VID24	YBR105C	SPT20	P50875	604 aa		4.76	□□□□□ -1.65
VID24	YBR105C	YDR132C	Q03900	495 aa		4.76	□□□□□ -1.65
VID24	YBR105C	YLR257W	Q06146	321 aa	Known RBP	4.76	□□□□□ -1.65
VID24	YBR105C	YOR352W	Q08816	343 aa		4.76	□□□□□ -1.65
VID24	YBR105C	YKL077W	P36081	392 aa		4.75	□□□□□ -1.65
VID24	YBR105C	SLS1	P42900	643 aa		4.75	□□□□□ -1.65
VID24	YBR105C	MCM5	P29496	775 aa	Known RBP	4.74	□□□□□ -1.65
VID24	YBR105C	YAR028W	P39548	234 aa		4.74	□□□□□ -1.65
VID24	YBR105C	NUT1	P53114	1132 aa		4.74	□□□□□ -1.65
VID24	YBR105C	FLP1	P03870	423 aa		4.73	□□□□□ -1.65
VID24	YBR105C	SRO9	P25567	434 aa	Known RBP	4.73	□□□□□ -1.65
VID24	YBR105C	MSE1	P48525	536 aa		4.73	□□□□□ -1.65
VID24	YBR105C	ENV11	P53246	860 aa		4.73	□□□□□ -1.65
VID24	YBR105C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.73	□□□□□ -1.65	RIP-Chip
VID24	YBR105C	YML122C	Q03207	126 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms