RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 GCP02774 474 aa11.59□□□□□ -0.55
PHGDH-217ENST00000641455 KDM2AQ9Y2K7 1162 aa11.59□□□□□ -0.55
PHGDH-217ENST00000641455 USP19O94966 1318 aa11.59□□□□□ -0.55
PHGDH-217ENST00000641455 MARCH10Q8NA82 808 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-217ENST00000641455 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
PHGDH-217ENST00000641455 CDK19Q9BWU1 502 aa11.58□□□□□ -0.56
PHGDH-217ENST00000641455 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
PHGDH-217ENST00000641455 ARHGEF28Q8N1W1 1705 aaKnown RBP11.57□□□□□ -0.56
PHGDH-217ENST00000641455 TOPAZ1Q8N9V7 1692 aa11.56□□□□□ -0.56
PHGDH-217ENST00000641455 WNK3Q9BYP7 1800 aa11.56□□□□□ -0.56
PHGDH-217ENST00000641455 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
PHGDH-217ENST00000641455 UTRNP46939 3433 aa11.56□□□□□ -0.56
PHGDH-217ENST00000641455 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
PHGDH-217ENST00000641455 CSB-PGBD3P0DP91 1061 aa11.55□□□□□ -0.56
PHGDH-217ENST00000641455 CDCA7Q9BWT1 371 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-217ENST00000641455 DCAF11Q8TEB1 546 aa11.54□□□□□ -0.56
PHGDH-217ENST00000641455 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
PHGDH-217ENST00000641455 AATKQ6ZMQ8 1374 aa11.54□□□□□ -0.56
PHGDH-217ENST00000641455 BCL9O00512 1426 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 EXOC5O00471 708 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 POLD1P28340 1107 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 NLRP6P59044 892 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 WDR17Q8IZU2 1322 aa11.53□□□□□ -0.56
PHGDH-217ENST00000641455 SRPK2P78362 688 aaKnown RBP11.52□□□□□ -0.57
PHGDH-217ENST00000641455 ACSBG1Q96GR2 724 aa11.52□□□□□ -0.57
PHGDH-217ENST00000641455 PPIP5K1Q6PFW1 1433 aa11.52□□□□□ -0.57
PHGDH-217ENST00000641455 KAT6BQ8WYB5 2073 aa11.51□□□□□ -0.57
PHGDH-217ENST00000641455 ZNF827Q17R98 1081 aa11.51□□□□□ -0.57
PHGDH-217ENST00000641455 NHSQ6T4R5 1651 aa11.5□□□□□ -0.57
PHGDH-217ENST00000641455 SOX12O15370 315 aa11.5□□□□□ -0.57
PHGDH-217ENST00000641455 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 NLGN2Q8NFZ4 835 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 AXIN2Q9Y2T1 843 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 BRD4O60885 1362 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-217ENST00000641455 ATP10DQ9P241 1426 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 SLIT3O75094 1523 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 COL18A1P39060 1754 aa11.49□□□□□ -0.57
PHGDH-217ENST00000641455 CEP350Q5VT06 3117 aa11.48□□□□□ -0.57
PHGDH-217ENST00000641455 GRIN3BO60391 1043 aa11.48□□□□□ -0.57
PHGDH-217ENST00000641455 HSPA6P17066 643 aa11.48□□□□□ -0.57
PHGDH-217ENST00000641455 ZNF526Q8TF50 670 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-217ENST00000641455 GPBP1L1Q9HC44 474 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-217ENST00000641455 CPSF1Q10570 1443 aaKnown RBP11.48□□□□□ -0.57
PHGDH-217ENST00000641455 TNS2Q63HR2 1409 aa11.48□□□□□ -0.57
PHGDH-217ENST00000641455 RGPD5Q99666 1765 aa11.48□□□□□ -0.57
PHGDH-217ENST00000641455 BTAF1O14981 1849 aa11.47□□□□□ -0.57
PHGDH-217ENST00000641455 SLC16A10Q8TF71 515 aa11.47□□□□□ -0.57
PHGDH-217ENST00000641455 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
PHGDH-217ENST00000641455 USP6P35125 1406 aa11.46□□□□□ -0.57
PHGDH-217ENST00000641455 CCDC7Q96M83 1385 aa11.46□□□□□ -0.57
PHGDH-217ENST00000641455 YBX3P16989 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
PHGDH-217ENST00000641455 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
PHGDH-217ENST00000641455 TFCP2L1Q9NZI6 479 aa11.45□□□□□ -0.58
PHGDH-217ENST00000641455 PIK3C2AO00443 1686 aa11.45□□□□□ -0.58
PHGDH-217ENST00000641455 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 MSH5O43196 834 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 ARHGEF25Q86VW2 580 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 KCNH5Q8NCM2 988 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 CABP1Q9NZU7 370 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 ABCC6O95255 1503 aa11.44□□□□□ -0.58
PHGDH-217ENST00000641455 QRICH2Q9H0J4 1663 aa11.43□□□□□ -0.58
PHGDH-217ENST00000641455 TRPM1Q7Z4N2 1603 aa11.43□□□□□ -0.58
PHGDH-217ENST00000641455 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
PHGDH-217ENST00000641455 QSER1Q2KHR3 1735 aa11.43□□□□□ -0.58
PHGDH-217ENST00000641455 NLRP2Q9NX02 1062 aa11.42□□□□□ -0.58
PHGDH-217ENST00000641455 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
PHGDH-217ENST00000641455 CENPJQ9HC77 1338 aaPredicted RBP11.41□□□□□ -0.58
PHGDH-217ENST00000641455 IL2RBP14784 551 aa11.41□□□□□ -0.58
PHGDH-217ENST00000641455 KCNQ4P56696 695 aa11.41□□□□□ -0.58
PHGDH-217ENST00000641455 SLC27A3Q5K4L6 730 aa11.41□□□□□ -0.58
PHGDH-217ENST00000641455 COL24A1Q17RW2 1714 aa11.4□□□□□ -0.58
PHGDH-217ENST00000641455 MSL1Q68DK7 614 aa11.4□□□□□ -0.58
PHGDH-217ENST00000641455 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
PHGDH-217ENST00000641455 CAPN15O75808 1086 aa11.39□□□□□ -0.59
PHGDH-217ENST00000641455 SYTL4Q96C24 671 aaPredicted RBP11.39□□□□□ -0.59
PHGDH-217ENST00000641455 DDX54Q8TDD1 881 aaKnown RBP11.38□□□□□ -0.59
PHGDH-217ENST00000641455 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
PHGDH-217ENST00000641455 NFAT5O94916 1531 aa11.37□□□□□ -0.59
PHGDH-217ENST00000641455 NBPF1Q3BBV0 1214 aa11.37□□□□□ -0.59
PHGDH-217ENST00000641455 WWC3Q9ULE0 1092 aa11.37□□□□□ -0.59
PHGDH-217ENST00000641455 ADCY9O60503 1353 aa11.37□□□□□ -0.59
PHGDH-217ENST00000641455 RAB3GAP2Q9H2M9 1393 aa11.37□□□□□ -0.59
PHGDH-217ENST00000641455 ERBB3P21860 1342 aa11.36□□□□□ -0.59
PHGDH-217ENST00000641455 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
PHGDH-217ENST00000641455 GOLGB1Q14789 3259 aaKnown RBP11.36□□□□□ -0.59
PHGDH-217ENST00000641455 APLP1P51693 650 aa11.36□□□□□ -0.59
PHGDH-217ENST00000641455 COL23A1Q86Y22 540 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-217ENST00000641455 ANKRD24Q8TF21 1146 aa11.35□□□□□ -0.59
PHGDH-217ENST00000641455 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-217ENST00000641455 CCNL1Q9UK58 526 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-217ENST00000641455 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
PHGDH-217ENST00000641455 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
PHGDH-217ENST00000641455 DOT1LQ8TEK3 1739 aa11.33□□□□□ -0.6
PHGDH-217ENST00000641455 KIF3CO14782 793 aa11.33□□□□□ -0.6
PHGDH-217ENST00000641455 PRIM1P49642 420 aaKnown RBP11.33□□□□□ -0.6
PHGDH-217ENST00000641455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.33□□□□□ -0.6
PHGDH-217ENST00000641455 LTN1O94822 1766 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms