RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 USP32Q8NFA0 1604 aa16.33■□□□□ 0.21
SPIN3-243ENST00000640717 MBIPQ9NS73 344 aa16.33■□□□□ 0.21
SPIN3-243ENST00000640717 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.33■□□□□ 0.2
SPIN3-243ENST00000640717 C3P01024 1663 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 TMEM57Q8N5G2 664 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 C8orf58Q8NAV2 365 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
SPIN3-243ENST00000640717 MAP2P11137 1827 aaKnown RBP16.32■□□□□ 0.2
SPIN3-243ENST00000640717 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 LRRC7Q96NW7 1537 aa16.32■□□□□ 0.2
SPIN3-243ENST00000640717 SIRT1Q96EB6 747 aa16.31■□□□□ 0.2
SPIN3-243ENST00000640717 TECPR2O15040 1411 aa16.31■□□□□ 0.2
SPIN3-243ENST00000640717 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
SPIN3-243ENST00000640717 USP6P35125 1406 aa16.3■□□□□ 0.2
SPIN3-243ENST00000640717 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
SPIN3-243ENST00000640717 ATF7IPQ6VMQ6 1270 aa16.29■□□□□ 0.2
SPIN3-243ENST00000640717 DDX17Q92841 729 aaKnown RBP16.29■□□□□ 0.2
SPIN3-243ENST00000640717 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
SPIN3-243ENST00000640717 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
SPIN3-243ENST00000640717 HSPA2P54652 639 aa16.28■□□□□ 0.2
SPIN3-243ENST00000640717 PSME1Q06323 249 aa16.28■□□□□ 0.2
SPIN3-243ENST00000640717 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
SPIN3-243ENST00000640717 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
SPIN3-243ENST00000640717 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.19
SPIN3-243ENST00000640717 MED14O60244 1454 aa16.27■□□□□ 0.19
SPIN3-243ENST00000640717 IPO9Q96P70 1041 aaKnown RBP16.26■□□□□ 0.19
SPIN3-243ENST00000640717 EYA1Q99502 592 aa16.26■□□□□ 0.19
SPIN3-243ENST00000640717 KIF20BQ96Q89 1820 aa16.26■□□□□ 0.19
SPIN3-243ENST00000640717 PHF8Q9UPP1 1060 aa16.26■□□□□ 0.19
SPIN3-243ENST00000640717 VAMP4O75379 141 aa16.25■□□□□ 0.19
SPIN3-243ENST00000640717 PDZRN3Q9UPQ7 1066 aa16.25■□□□□ 0.19
SPIN3-243ENST00000640717 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
SPIN3-243ENST00000640717 SEC24BO95487 1268 aa16.24■□□□□ 0.19
SPIN3-243ENST00000640717 GNAI1P63096 354 aa16.24■□□□□ 0.19
SPIN3-243ENST00000640717 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
SPIN3-243ENST00000640717 C8orf34Q49A92 452 aa16.23■□□□□ 0.19
SPIN3-243ENST00000640717 MS4A1P11836 297 aa16.22■□□□□ 0.19
SPIN3-243ENST00000640717 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
SPIN3-243ENST00000640717 SETD1BQ9UPS6 1966 aaKnown RBP16.22■□□□□ 0.19
SPIN3-243ENST00000640717 AATKQ6ZMQ8 1374 aa16.22■□□□□ 0.19
SPIN3-243ENST00000640717 APBB1O00213 710 aa16.22■□□□□ 0.19
SPIN3-243ENST00000640717 LRRC59Q96AG4 307 aaKnown RBP16.21■□□□□ 0.19
SPIN3-243ENST00000640717 RTF1Q92541 710 aaKnown RBP16.21■□□□□ 0.19
SPIN3-243ENST00000640717 RGPD8O14715 1765 aaPredicted RBP16.21■□□□□ 0.19
SPIN3-243ENST00000640717 FAM161AQ3B820 660 aa16.21■□□□□ 0.18
SPIN3-243ENST00000640717 CFAP44Q96MT7 982 aa16.21■□□□□ 0.18
SPIN3-243ENST00000640717 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.18
SPIN3-243ENST00000640717 ADGRB2O60241 1585 aa16.2■□□□□ 0.18
SPIN3-243ENST00000640717 CDK12Q9NYV4 1490 aaPredicted RBP16.2■□□□□ 0.18
SPIN3-243ENST00000640717 ZNF428Q96B54 188 aa16.2■□□□□ 0.18
SPIN3-243ENST00000640717 RWDD1Q9H446 243 aaPredicted RBP16.2■□□□□ 0.18
SPIN3-243ENST00000640717 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 IL16Q14005 1332 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 SLIT1O75093 1534 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
SPIN3-243ENST00000640717 HOXC9P31274 260 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 SLC4A10Q6U841 1118 aa16.19■□□□□ 0.18
SPIN3-243ENST00000640717 DIP2AQ14689 1571 aa16.18■□□□□ 0.18
SPIN3-243ENST00000640717 ZC3H6P61129 1189 aaKnown RBP16.18■□□□□ 0.18
SPIN3-243ENST00000640717 MRPL50Q8N5N7 158 aaKnown RBP16.18■□□□□ 0.18
SPIN3-243ENST00000640717 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
SPIN3-243ENST00000640717 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
SPIN3-243ENST00000640717 DDX19BQ9UMR2 479 aa16.18■□□□□ 0.18
SPIN3-243ENST00000640717 CEP170BQ9Y4F5 1589 aaPredicted RBP16.17■□□□□ 0.18
SPIN3-243ENST00000640717 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
SPIN3-243ENST00000640717 F6X3S4 739 aa16.17■□□□□ 0.18
SPIN3-243ENST00000640717 KIF16BQ96L93 1317 aa16.17■□□□□ 0.18
SPIN3-243ENST00000640717 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
SPIN3-243ENST00000640717 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
SPIN3-243ENST00000640717 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
SPIN3-243ENST00000640717 ZNF853P0CG23 659 aa16.16■□□□□ 0.18
SPIN3-243ENST00000640717 ITSN1Q15811 1721 aa16.15■□□□□ 0.18
SPIN3-243ENST00000640717 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
SPIN3-243ENST00000640717 FLT4P35916 1363 aa16.15■□□□□ 0.18
SPIN3-243ENST00000640717 G2E3Q7L622 706 aa16.14■□□□□ 0.17
SPIN3-243ENST00000640717 DNAJC5Q9H3Z4 198 aa16.14■□□□□ 0.17
SPIN3-243ENST00000640717 ZBTB40Q9NUA8 1239 aa16.14■□□□□ 0.17
SPIN3-243ENST00000640717 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
SPIN3-243ENST00000640717 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
SPIN3-243ENST00000640717 NBPF6Q5VWK0 638 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 NBPF4Q96M43 638 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 ANKRD45Q5TZF3 282 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 SSH2Q76I76 1423 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 MON2Q7Z3U7 1717 aa16.13■□□□□ 0.17
SPIN3-243ENST00000640717 DAXXQ9UER7 740 aaPredicted RBP16.12■□□□□ 0.17
SPIN3-243ENST00000640717 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
SPIN3-243ENST00000640717 ALDH1L2Q3SY69 923 aa16.12■□□□□ 0.17
SPIN3-243ENST00000640717 USP31Q70CQ4 1352 aa16.11■□□□□ 0.17
SPIN3-243ENST00000640717 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
SPIN3-243ENST00000640717 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
SPIN3-243ENST00000640717 SPRYD3Q8NCJ5 442 aa16.11■□□□□ 0.17
SPIN3-243ENST00000640717 CHL1O00533 1208 aa16.1■□□□□ 0.17
SPIN3-243ENST00000640717 LGR6Q9HBX8 967 aa16.1■□□□□ 0.17
SPIN3-243ENST00000640717 ZBTB7BO15156 539 aaPredicted RBP16.1■□□□□ 0.17
SPIN3-243ENST00000640717 ANXA1P04083 346 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms