RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 ERC2O15083 957 aa12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 NINLQ9Y2I6 1382 aa12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 HSPA4P34932 840 aa12.84□□□□□ -0.35
KCNMA1-259ENST00000639406 EVA1CP58658 441 aa12.83□□□□□ -0.35
KCNMA1-259ENST00000639406 TRMT1Q9NXH9 659 aaKnown RBP12.83□□□□□ -0.35
KCNMA1-259ENST00000639406 USP25Q9UHP3 1055 aa12.83□□□□□ -0.35
KCNMA1-259ENST00000639406 STK26Q9P289 416 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 KIF5CO60282 957 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 CCDC175P0C221 793 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 CNTLNQ9NXG0 1405 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 ST20-MTHFSA0A0A6YYL1 179 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 ERICH2A1L162 156 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 OGFRQ9NZT2 677 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 CCDC183Q5T5S1 534 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 GIGYF2Q6Y7W6 1299 aaKnown RBP12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 CEP57Q86XR8 500 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 SPATA32Q96LK8 384 aa12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
KCNMA1-259ENST00000639406 TXLNAP40222 546 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 SETSIPP0DME0 302 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 ME1P48163 572 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 SMC1AQ14683 1233 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 NEMFO60524 1076 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 KIF4BQ2VIQ3 1234 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 CCDC113Q9H0I3 377 aa12.82□□□□□ -0.36
KCNMA1-259ENST00000639406 XRCC6P12956 609 aaKnown RBP eCLIP12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 CAMK4Q16566 473 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 ADCY5O95622 1261 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 BANK1Q8NDB2 785 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 BCCIPQ9P287 314 aaKnown RBP eCLIP12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 CNTROBQ8N137 903 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
KCNMA1-259ENST00000639406 NOLC1Q14978 699 aaKnown RBP eCLIP12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 SEPT6Q14141 434 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 SPECC1LQ69YQ0 1117 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 KDM4AO75164 1064 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 CFAP100Q494V2 611 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 MSL1Q68DK7 614 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 TAF4BQ92750 862 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 CDCA7LQ96GN5 454 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 RSRC1Q96IZ7 334 aaKnown RBP12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
KCNMA1-259ENST00000639406 ATP2C2O75185 946 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 NAA25Q14CX7 972 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 TNPO1Q92973 898 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 RAI14Q9P0K7 980 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 MPHOSPH10O00566 681 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 RALYLQ86SE5 291 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 JMYQ8N9B5 988 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 IFFO1Q0D2I5 559 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 ANKRD30AQ9BXX3 1397 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 CAPN2P17655 700 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 LARP1BQ659C4 914 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 DAAM2Q86T65 1068 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 FEZ1Q99689 392 aa12.79□□□□□ -0.36
KCNMA1-259ENST00000639406 XBP1P17861 261 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 NUP133Q8WUM0 1156 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 TCEAL9Q9UHQ7 104 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 USP47Q96K76 1375 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 SYCP1Q15431 976 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 C9orf78Q9NZ63 289 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 FANCD2Q9BXW9 1451 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 RUNDC1Q96C34 613 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 ARID4AP29374 1257 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 KRBA2Q6ZNG9 492 aa12.78□□□□□ -0.36
KCNMA1-259ENST00000639406 ATF3P18847 181 aa12.77□□□□□ -0.36
KCNMA1-259ENST00000639406 CCDC7Q96M83 1385 aa12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 UVSSAQ2YD98 709 aa12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 MYZAPP0CAP1 466 aa12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 LIG1P18858 919 aa12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 SCLT1Q96NL6 688 aa12.77□□□□□ -0.37
KCNMA1-259ENST00000639406 NUP155O75694 1391 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 PANK2Q9BZ23 570 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 SSFA2P28290 1259 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 RIPK4P57078 832 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 CEP83Q9Y592 693 aa12.76□□□□□ -0.37
KCNMA1-259ENST00000639406 DHX16O60231 1041 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms