RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
SCARB2-210ENST00000638567 SLC26A8Q96RN1 970 aa20■□□□□ 0.79
SCARB2-210ENST00000638567 UPF3BQ9BZI7 483 aaKnown RBP20■□□□□ 0.79
SCARB2-210ENST00000638567 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
SCARB2-210ENST00000638567 TEX14Q8IWB6 1497 aa20■□□□□ 0.79
SCARB2-210ENST00000638567 RNF123Q5XPI4 1314 aa20■□□□□ 0.79
SCARB2-210ENST00000638567 ASXL1Q8IXJ9 1541 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 RLBP1P12271 317 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 ADGRL1O94910 1474 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 BCL11BQ9C0K0 894 aaPredicted RBP19.99■□□□□ 0.79
SCARB2-210ENST00000638567 PDCP20941 246 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 BMP2KLQ5H9B9 411 aa19.99■□□□□ 0.79
SCARB2-210ENST00000638567 CCAR2Q8N163 923 aaKnown RBP19.99■□□□□ 0.79
SCARB2-210ENST00000638567 TBC1D9Q6ZT07 1266 aa19.98■□□□□ 0.79
SCARB2-210ENST00000638567 TRIM5Q9C035 493 aa19.98■□□□□ 0.79
SCARB2-210ENST00000638567 FBLN1P23142 703 aa19.98■□□□□ 0.79
SCARB2-210ENST00000638567 LETM1O95202 739 aaPredicted RBP19.97■□□□□ 0.79
SCARB2-210ENST00000638567 TRDNQ13061 729 aa19.97■□□□□ 0.79
SCARB2-210ENST00000638567 WDR62O43379 1518 aa19.97■□□□□ 0.79
SCARB2-210ENST00000638567 SYCE3A1L190 88 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 SDF4Q9BRK5 362 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 CYP46A1Q9Y6A2 500 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 F6X3S4 739 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 SYNE3Q6ZMZ3 975 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 HOMER1Q86YM7 354 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 NUP160Q12769 1436 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 SEC24BO95487 1268 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 CARD14Q9BXL6 1004 aa19.96■□□□□ 0.79
SCARB2-210ENST00000638567 HDAC1Q13547 482 aaPredicted RBP19.95■□□□□ 0.78
SCARB2-210ENST00000638567 TRIM29Q14134 588 aa19.95■□□□□ 0.78
SCARB2-210ENST00000638567 ZSCAN30Q86W11 494 aa19.95■□□□□ 0.78
SCARB2-210ENST00000638567 SPC24Q8NBT2 197 aa19.95■□□□□ 0.78
SCARB2-210ENST00000638567 DNAJC2Q99543 621 aaKnown RBP19.95■□□□□ 0.78
SCARB2-210ENST00000638567 CWC27Q6UX04 472 aaKnown RBP19.95■□□□□ 0.78
SCARB2-210ENST00000638567 PES1O00541 588 aaKnown RBP19.94■□□□□ 0.78
SCARB2-210ENST00000638567 PLEKHO1Q53GL0 409 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-210ENST00000638567 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
SCARB2-210ENST00000638567 AKAP17AQ02040 695 aaKnown RBP19.94■□□□□ 0.78
SCARB2-210ENST00000638567 WASHC4Q2M389 1173 aa19.94■□□□□ 0.78
SCARB2-210ENST00000638567 SIL1Q9H173 461 aa19.94■□□□□ 0.78
SCARB2-210ENST00000638567 NUTM1Q86Y26 1132 aa19.94■□□□□ 0.78
SCARB2-210ENST00000638567 TPM3P06753 285 aa19.94■□□□□ 0.78
SCARB2-210ENST00000638567 GTF2E1P29083 439 aaPredicted RBP19.94■□□□□ 0.78
SCARB2-210ENST00000638567 TPD52L1Q16890 204 aaPredicted RBP19.93■□□□□ 0.78
SCARB2-210ENST00000638567 NSD2O96028 1365 aa19.93■□□□□ 0.78
SCARB2-210ENST00000638567 MX1P20591 662 aa19.93■□□□□ 0.78
SCARB2-210ENST00000638567 RALYLQ86SE5 291 aaKnown RBP19.93■□□□□ 0.78
SCARB2-210ENST00000638567 ERC1Q8IUD2 1116 aa19.93■□□□□ 0.78
SCARB2-210ENST00000638567 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
SCARB2-210ENST00000638567 ZNF530Q6P9A1 599 aaPredicted RBP19.93■□□□□ 0.78
SCARB2-210ENST00000638567 ARHGEF12Q9NZN5 1544 aa19.93■□□□□ 0.78
SCARB2-210ENST00000638567 CEBPZQ03701 1054 aaKnown RBP19.92■□□□□ 0.78
SCARB2-210ENST00000638567 FAM83GA6ND36 823 aa19.92■□□□□ 0.78
SCARB2-210ENST00000638567 STK3Q13188 491 aa19.92■□□□□ 0.78
SCARB2-210ENST00000638567 HIP1O00291 1037 aa19.92■□□□□ 0.78
SCARB2-210ENST00000638567 ZNF771Q7L3S4 317 aaPredicted RBP19.92■□□□□ 0.78
SCARB2-210ENST00000638567 MBIPQ9NS73 344 aa19.91■□□□□ 0.78
SCARB2-210ENST00000638567 SYCP2Q9BX26 1530 aa19.91■□□□□ 0.78
SCARB2-210ENST00000638567 POLR3AO14802 1390 aaPredicted RBP19.91■□□□□ 0.78
SCARB2-210ENST00000638567 IL16Q14005 1332 aa19.91■□□□□ 0.78
SCARB2-210ENST00000638567 ESCO1Q5FWF5 840 aa19.91■□□□□ 0.78
SCARB2-210ENST00000638567 LARP1BQ659C4 914 aaKnown RBP19.91■□□□□ 0.78
SCARB2-210ENST00000638567 UHRF1BP1Q6BDS2 1440 aa19.91■□□□□ 0.78
SCARB2-210ENST00000638567 JAKMIP1Q96N16 626 aaKnown RBP19.91■□□□□ 0.78
SCARB2-210ENST00000638567 NUCB1Q02818 461 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 MTERF4Q7Z6M4 381 aaKnown RBP19.9■□□□□ 0.78
SCARB2-210ENST00000638567 ITSN2Q9NZM3 1697 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 FYB1O15117 783 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 NFXL1Q6ZNB6 911 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 CD109Q6YHK3 1445 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 HMGN5P82970 282 aaKnown RBP19.9■□□□□ 0.78
SCARB2-210ENST00000638567 KRT85P78386 507 aa19.9■□□□□ 0.78
SCARB2-210ENST00000638567 KINO60870 393 aaKnown RBP19.89■□□□□ 0.78
SCARB2-210ENST00000638567 CCDC192P0DO97 292 aa19.89■□□□□ 0.78
SCARB2-210ENST00000638567 EVA1CP58658 441 aa19.89■□□□□ 0.78
SCARB2-210ENST00000638567 PIK3C2GO75747 1445 aa19.89■□□□□ 0.77
SCARB2-210ENST00000638567 AACSQ86V21 672 aa19.89■□□□□ 0.77
SCARB2-210ENST00000638567 FANCAO15360 1455 aa19.89■□□□□ 0.77
SCARB2-210ENST00000638567 SPATA31E1Q6ZUB1 1445 aa19.88■□□□□ 0.77
SCARB2-210ENST00000638567 AEBP1Q8IUX7 1158 aa19.88■□□□□ 0.77
SCARB2-210ENST00000638567 FMNL2Q96PY5 1086 aa19.88■□□□□ 0.77
SCARB2-210ENST00000638567 COL17A1Q9UMD9 1497 aaPredicted RBP19.88■□□□□ 0.77
SCARB2-210ENST00000638567 BAG4O95429 457 aaKnown RBP19.88■□□□□ 0.77
SCARB2-210ENST00000638567 TNNT3P45378 269 aaPredicted RBP19.88■□□□□ 0.77
SCARB2-210ENST00000638567 XRCC6P12956 609 aaKnown RBP eCLIP19.87■□□□□ 0.77
SCARB2-210ENST00000638567 BLOC1S2Q6QNY1 142 aa19.87■□□□□ 0.77
SCARB2-210ENST00000638567 PANK2Q9BZ23 570 aa19.87■□□□□ 0.77
SCARB2-210ENST00000638567 PDRG1Q9NUG6 133 aa19.87■□□□□ 0.77
SCARB2-210ENST00000638567 GOLGA6L1Q8N7Z2 621 aa19.87■□□□□ 0.77
SCARB2-210ENST00000638567 DNMT1P26358 1616 aaKnown RBP19.87■□□□□ 0.77
SCARB2-210ENST00000638567 GNAT3A8MTJ3 354 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 WASLO00401 505 aaPredicted RBP19.86■□□□□ 0.77
SCARB2-210ENST00000638567 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 KDM5BQ9UGL1 1544 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 DMRT2Q9Y5R5 561 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 KDM2BQ8NHM5 1336 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 ANKRD36BQ8N2N9 1353 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 UQCRHLA0A096LP55 91 aa19.86■□□□□ 0.77
SCARB2-210ENST00000638567 UQCRHP07919 91 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms