RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ROBO2Q9HCK4 1378 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 SHPRHQ149N8 1683 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 FGD1P98174 961 aa9.3□□□□□ -0.92
BRCA1-230ENST00000634433 NKTRP30414 1462 aaKnown RBP9.29□□□□□ -0.92
BRCA1-230ENST00000634433 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
BRCA1-230ENST00000634433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.29□□□□□ -0.92
BRCA1-230ENST00000634433 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-230ENST00000634433 AMOTL2Q9Y2J4 779 aa9.29□□□□□ -0.92
BRCA1-230ENST00000634433 XIRP1Q702N8 1843 aaKnown RBP9.29□□□□□ -0.92
BRCA1-230ENST00000634433 PIP4K2BP78356 416 aa9.29□□□□□ -0.92
BRCA1-230ENST00000634433 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
BRCA1-230ENST00000634433 SLC26A8Q96RN1 970 aa9.29□□□□□ -0.92
BRCA1-230ENST00000634433 KIF20BQ96Q89 1820 aa9.29□□□□□ -0.92
BRCA1-230ENST00000634433 PNPLA6Q8IY17 1366 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 ADGRB2O60241 1585 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 PLEKHG3A1L390 1219 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 COG3Q96JB2 828 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 CDC42BPGQ6DT37 1551 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 U2SURPO15042 1029 aaKnown RBP9.28□□□□□ -0.92
BRCA1-230ENST00000634433 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-230ENST00000634433 NEFMP07197 916 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 EXOC6Q8TAG9 804 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 PTCH1Q13635 1447 aa9.28□□□□□ -0.92
BRCA1-230ENST00000634433 AATKQ6ZMQ8 1374 aa9.27□□□□□ -0.93
BRCA1-230ENST00000634433 MYH16Q9H6N6 1097 aa9.27□□□□□ -0.93
BRCA1-230ENST00000634433 COL3A1P02461 1466 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-230ENST00000634433 FCHSD2O94868 740 aa9.26□□□□□ -0.93
BRCA1-230ENST00000634433 POLKQ9UBT6 870 aa9.26□□□□□ -0.93
BRCA1-230ENST00000634433 PTPRUQ92729 1446 aa9.26□□□□□ -0.93
BRCA1-230ENST00000634433 SLC24A3Q9HC58 644 aa9.26□□□□□ -0.93
BRCA1-230ENST00000634433 LMOD2Q6P5Q4 547 aa9.25□□□□□ -0.93
BRCA1-230ENST00000634433 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
BRCA1-230ENST00000634433 PRR36Q9H6K5 1346 aa9.25□□□□□ -0.93
BRCA1-230ENST00000634433 PLIN1O60240 522 aa9.25□□□□□ -0.93
BRCA1-230ENST00000634433 CT47B1P0C2W7 299 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-230ENST00000634433 SPINK5Q9NQ38 1064 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-230ENST00000634433 IL16Q14005 1332 aa9.24□□□□□ -0.93
BRCA1-230ENST00000634433 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
BRCA1-230ENST00000634433 NME9Q86XW9 330 aa9.24□□□□□ -0.93
BRCA1-230ENST00000634433 CRBNQ96SW2 442 aa9.24□□□□□ -0.93
BRCA1-230ENST00000634433 RRP7AQ9Y3A4 280 aaKnown RBP9.24□□□□□ -0.93
BRCA1-230ENST00000634433 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-230ENST00000634433 ACEP12821 1306 aa9.24□□□□□ -0.93
BRCA1-230ENST00000634433 TTC21BQ7Z4L5 1316 aa9.24□□□□□ -0.93
BRCA1-230ENST00000634433 PPM1GO15355 546 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-230ENST00000634433 RBM19Q9Y4C8 960 aaKnown RBP9.24□□□□□ -0.93
BRCA1-230ENST00000634433 ITSN1Q15811 1721 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 MON2Q7Z3U7 1717 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 AKAP12Q02952 1782 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 TTC21AQ8NDW8 1320 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 SLC4A2P04920 1241 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 CCDC82Q8N4S0 544 aa9.23□□□□□ -0.93
BRCA1-230ENST00000634433 PDE3AQ14432 1141 aa9.22□□□□□ -0.93
BRCA1-230ENST00000634433 CERS3Q8IU89 383 aa9.22□□□□□ -0.93
BRCA1-230ENST00000634433 RGS17Q9UGC6 210 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-230ENST00000634433 CDK12Q9NYV4 1490 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-230ENST00000634433 CALD1Q05682 793 aaKnown RBP9.22□□□□□ -0.93
BRCA1-230ENST00000634433 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.93
BRCA1-230ENST00000634433 RIPK4P57078 832 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 AAMPQ13685 434 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
BRCA1-230ENST00000634433 USP6P35125 1406 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 TOPAZ1Q8N9V7 1692 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 NWD1Q149M9 1564 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 CANXP27824 592 aaKnown RBP9.21□□□□□ -0.94
BRCA1-230ENST00000634433 IL13P35225 146 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 EMILIN1Q9Y6C2 1016 aa9.21□□□□□ -0.94
BRCA1-230ENST00000634433 MAP2P11137 1827 aaKnown RBP9.2□□□□□ -0.94
BRCA1-230ENST00000634433 ZNF526Q8TF50 670 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-230ENST00000634433 ATF5Q9Y2D1 282 aaPredicted RBP9.2□□□□□ -0.94
BRCA1-230ENST00000634433 XRN1Q8IZH2 1706 aaKnown RBP9.2□□□□□ -0.94
BRCA1-230ENST00000634433 BCAR3O75815 825 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 MS4A1P11836 297 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 KCNA6P17658 529 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 RARSP54136 660 aaKnown RBP9.2□□□□□ -0.94
BRCA1-230ENST00000634433 LMOD3Q0VAK6 560 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 TRIM35Q9UPQ4 493 aa9.2□□□□□ -0.94
BRCA1-230ENST00000634433 ROBO1Q9Y6N7 1651 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 NUTM2FA1L443 756 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 TCERG1O14776 1098 aaKnown RBP9.19□□□□□ -0.94
BRCA1-230ENST00000634433 PRKAR2BP31323 418 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
BRCA1-230ENST00000634433 NFE2L2Q16236 605 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 C20orf194Q5TEA3 1177 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 PHLPP1O60346 1717 aa9.19□□□□□ -0.94
BRCA1-230ENST00000634433 USP31Q70CQ4 1352 aa9.18□□□□□ -0.94
BRCA1-230ENST00000634433 OVOS2A0A0J9YW53 1432 aa9.18□□□□□ -0.94
BRCA1-230ENST00000634433 OVOS2Q6IE36 1432 aa9.18□□□□□ -0.94
BRCA1-230ENST00000634433 SSH2Q76I76 1423 aa9.18□□□□□ -0.94
BRCA1-230ENST00000634433 NCOA3Q9Y6Q9 1424 aa9.18□□□□□ -0.94
BRCA1-230ENST00000634433 CENPQQ7L2Z9 268 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-230ENST00000634433 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-230ENST00000634433 FBLN1P23142 703 aa9.17□□□□□ -0.94
BRCA1-230ENST00000634433 RRS1Q15050 365 aaKnown RBP9.17□□□□□ -0.94
BRCA1-230ENST00000634433 PMFBP1Q8TBY8 1022 aa9.17□□□□□ -0.94
BRCA1-230ENST00000634433 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
BRCA1-230ENST00000634433 NRKQ7Z2Y5 1582 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms