RNA–Protein interactions for RNA: ENST00000625837.2

DDX3X-215, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5 BASIC

Gene DDX3X, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-215ENST00000625837 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
DDX3X-215ENST00000625837 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.26
DDX3X-215ENST00000625837 PTPRUQ92729 1446 aa13.45□□□□□ -0.26
DDX3X-215ENST00000625837 ATF7IPQ6VMQ6 1270 aa13.45□□□□□ -0.26
DDX3X-215ENST00000625837 EDC4Q6P2E9 1401 aaKnown RBP13.45□□□□□ -0.26
DDX3X-215ENST00000625837 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
DDX3X-215ENST00000625837 PHF8Q9UPP1 1060 aa13.45□□□□□ -0.26
DDX3X-215ENST00000625837 CPS1P31327 1500 aa13.44□□□□□ -0.26
DDX3X-215ENST00000625837 GNAI1P63096 354 aa13.44□□□□□ -0.26
DDX3X-215ENST00000625837 PLEKHG1Q9ULL1 1385 aa13.44□□□□□ -0.26
DDX3X-215ENST00000625837 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
DDX3X-215ENST00000625837 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
DDX3X-215ENST00000625837 IPO8O15397 1037 aaKnown RBP13.43□□□□□ -0.26
DDX3X-215ENST00000625837 ZC3H6P61129 1189 aaKnown RBP13.43□□□□□ -0.26
DDX3X-215ENST00000625837 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
DDX3X-215ENST00000625837 PDZRN3Q9UPQ7 1066 aa13.43□□□□□ -0.26
DDX3X-215ENST00000625837 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
DDX3X-215ENST00000625837 EYA1Q99502 592 aa13.42□□□□□ -0.26
DDX3X-215ENST00000625837 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
DDX3X-215ENST00000625837 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
DDX3X-215ENST00000625837 TSPYL4Q9UJ04 414 aa13.41□□□□□ -0.26
DDX3X-215ENST00000625837 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
DDX3X-215ENST00000625837 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
DDX3X-215ENST00000625837 MTHFSDQ2M296 383 aaKnown RBP13.41□□□□□ -0.26
DDX3X-215ENST00000625837 CALD1Q05682 793 aaKnown RBP13.4□□□□□ -0.26
DDX3X-215ENST00000625837 LRRC59Q96AG4 307 aaKnown RBP13.4□□□□□ -0.26
DDX3X-215ENST00000625837 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
DDX3X-215ENST00000625837 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
DDX3X-215ENST00000625837 FAM161AQ3B820 660 aa13.4□□□□□ -0.26
DDX3X-215ENST00000625837 NLRP1Q9C000 1473 aa13.4□□□□□ -0.26
DDX3X-215ENST00000625837 VAMP4O75379 141 aa13.39□□□□□ -0.27
DDX3X-215ENST00000625837 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
DDX3X-215ENST00000625837 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
DDX3X-215ENST00000625837 DDX19BQ9UMR2 479 aa13.39□□□□□ -0.27
DDX3X-215ENST00000625837 ATP7BP35670 1465 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 F6X3S4 739 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 MS4A1P11836 297 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 SIRT1Q96EB6 747 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 FAM135BQ49AJ0 1406 aa13.38□□□□□ -0.27
DDX3X-215ENST00000625837 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
DDX3X-215ENST00000625837 CFAP44Q96MT7 982 aa13.37□□□□□ -0.27
DDX3X-215ENST00000625837 SEC24BO95487 1268 aa13.37□□□□□ -0.27
DDX3X-215ENST00000625837 KIF16BQ96L93 1317 aa13.36□□□□□ -0.27
DDX3X-215ENST00000625837 USP6P35125 1406 aa13.36□□□□□ -0.27
DDX3X-215ENST00000625837 CSB-PGBD3P0DP91 1061 aa13.36□□□□□ -0.27
DDX3X-215ENST00000625837 PNPLA6Q8IY17 1366 aa13.36□□□□□ -0.27
DDX3X-215ENST00000625837 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
DDX3X-215ENST00000625837 MFAP1P55081 439 aaKnown RBP13.35□□□□□ -0.27
DDX3X-215ENST00000625837 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
DDX3X-215ENST00000625837 IFT57Q9NWB7 429 aa13.35□□□□□ -0.27
DDX3X-215ENST00000625837 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
DDX3X-215ENST00000625837 REREQ9P2R6 1566 aa13.35□□□□□ -0.27
DDX3X-215ENST00000625837 SHPRHQ149N8 1683 aa13.35□□□□□ -0.27
DDX3X-215ENST00000625837 ATF3P18847 181 aa13.34□□□□□ -0.27
DDX3X-215ENST00000625837 HOXC9P31274 260 aa13.34□□□□□ -0.27
DDX3X-215ENST00000625837 LRRC7Q96NW7 1537 aa13.34□□□□□ -0.27
DDX3X-215ENST00000625837 C8orf34Q49A92 452 aa13.34□□□□□ -0.27
DDX3X-215ENST00000625837 ANXA1P04083 346 aa13.33□□□□□ -0.28
DDX3X-215ENST00000625837 CHRNA2Q15822 529 aa13.33□□□□□ -0.28
DDX3X-215ENST00000625837 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
DDX3X-215ENST00000625837 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
DDX3X-215ENST00000625837 IQSEC2Q5JU85 1478 aa13.33□□□□□ -0.28
DDX3X-215ENST00000625837 MRPL50Q8N5N7 158 aaKnown RBP13.33□□□□□ -0.28
DDX3X-215ENST00000625837 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
DDX3X-215ENST00000625837 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 FKBP5Q13451 457 aaPredicted RBP13.32□□□□□ -0.28
DDX3X-215ENST00000625837 SLKQ9H2G2 1235 aaPredicted RBP13.32□□□□□ -0.28
DDX3X-215ENST00000625837 IL16Q14005 1332 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 DLC1Q96QB1 1528 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 UBR1Q8IWV7 1749 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 G2E3Q7L622 706 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 KRT28Q7Z3Y7 464 aa13.32□□□□□ -0.28
DDX3X-215ENST00000625837 COL3A1P02461 1466 aaPredicted RBP13.31□□□□□ -0.28
DDX3X-215ENST00000625837 NBPF6Q5VWK0 638 aa13.31□□□□□ -0.28
DDX3X-215ENST00000625837 NBPF4Q96M43 638 aa13.31□□□□□ -0.28
DDX3X-215ENST00000625837 STK31Q9BXU1 1019 aa13.31□□□□□ -0.28
DDX3X-215ENST00000625837 TTC21AQ8NDW8 1320 aa13.31□□□□□ -0.28
DDX3X-215ENST00000625837 A0A0G2JS52 829 aa13.3□□□□□ -0.28
DDX3X-215ENST00000625837 FLT4P35916 1363 aa13.3□□□□□ -0.28
DDX3X-215ENST00000625837 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
DDX3X-215ENST00000625837 USP35Q9P2H5 1018 aa13.3□□□□□ -0.28
DDX3X-215ENST00000625837 GCP02774 474 aa13.3□□□□□ -0.28
DDX3X-215ENST00000625837 TEFQ10587 303 aa13.3□□□□□ -0.28
DDX3X-215ENST00000625837 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.29□□□□□ -0.28
DDX3X-215ENST00000625837 AATKQ6ZMQ8 1374 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 ZNF530Q6P9A1 599 aaPredicted RBP13.29□□□□□ -0.28
DDX3X-215ENST00000625837 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 LGR6Q9HBX8 967 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 TECPR2O15040 1411 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 ALDH1L2Q3SY69 923 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
DDX3X-215ENST00000625837 C3P01024 1663 aa13.28□□□□□ -0.28
DDX3X-215ENST00000625837 API5Q9BZZ5 524 aaKnown RBP13.28□□□□□ -0.28
DDX3X-215ENST00000625837 FER1L4A9Z1Z3 1794 aa13.28□□□□□ -0.28
DDX3X-215ENST00000625837 CDC42BPGQ6DT37 1551 aa13.27□□□□□ -0.28
DDX3X-215ENST00000625837 SMARCA5O60264 1052 aaPredicted RBP13.27□□□□□ -0.28
DDX3X-215ENST00000625837 MEIS3Q99687 375 aa13.27□□□□□ -0.29
DDX3X-215ENST00000625837 RIMS1Q86UR5 1692 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms