RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TTC37Q6PGP7 1564 aa18.53■□□□□ 0.56
PMS1-221ENST00000624204 HMGN5P82970 282 aaKnown RBP18.53■□□□□ 0.56
PMS1-221ENST00000624204 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.56
PMS1-221ENST00000624204 MAST1Q9Y2H9 1570 aa18.52■□□□□ 0.56
PMS1-221ENST00000624204 ZBTB7BO15156 539 aaPredicted RBP18.52■□□□□ 0.56
PMS1-221ENST00000624204 MBD3O95983 291 aa18.52■□□□□ 0.56
PMS1-221ENST00000624204 USP25Q9UHP3 1055 aa18.52■□□□□ 0.56
PMS1-221ENST00000624204 ABCC11Q96J66 1382 aa18.52■□□□□ 0.56
PMS1-221ENST00000624204 USP26Q9BXU7 913 aa18.52■□□□□ 0.56
PMS1-221ENST00000624204 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.55
PMS1-221ENST00000624204 PTPRTO14522 1441 aa18.52■□□□□ 0.55
PMS1-221ENST00000624204 SIRT2Q8IXJ6 389 aa18.51■□□□□ 0.55
PMS1-221ENST00000624204 PRIMPOLQ96LW4 560 aa18.51■□□□□ 0.55
PMS1-221ENST00000624204 GGNBP2Q9H3C7 697 aa18.51■□□□□ 0.55
PMS1-221ENST00000624204 NOS1P29475 1434 aa18.5■□□□□ 0.55
PMS1-221ENST00000624204 INTS3Q68E01 1043 aaKnown RBP18.5■□□□□ 0.55
PMS1-221ENST00000624204 GTPBP4Q9BZE4 634 aaKnown RBP18.5■□□□□ 0.55
PMS1-221ENST00000624204 VGLL3A8MV65 326 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 CFAP74Q9C0B2 1584 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 PLEKHM2Q8IWE5 1019 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 SMARCA5O60264 1052 aaPredicted RBP18.49■□□□□ 0.55
PMS1-221ENST00000624204 PDCL2Q8N4E4 241 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 PIBF1Q8WXW3 757 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
PMS1-221ENST00000624204 CASC1Q6TDU7 716 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
PMS1-221ENST00000624204 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
PMS1-221ENST00000624204 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 STK26Q9P289 416 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 CDC42BPBQ9Y5S2 1711 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.48■□□□□ 0.55
PMS1-221ENST00000624204 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
PMS1-221ENST00000624204 DUOX2Q9NRD8 1548 aa18.48■□□□□ 0.55
PMS1-221ENST00000624204 SHROOM2Q13796 1616 aa18.47■□□□□ 0.55
PMS1-221ENST00000624204 NEK4P51957 841 aa18.47■□□□□ 0.55
PMS1-221ENST00000624204 OTUD7AQ8TE49 926 aaPredicted RBP18.47■□□□□ 0.55
PMS1-221ENST00000624204 KIF20AO95235 890 aa18.47■□□□□ 0.55
PMS1-221ENST00000624204 SPC24Q8NBT2 197 aa18.47■□□□□ 0.55
PMS1-221ENST00000624204 ALDH1L2Q3SY69 923 aa18.46■□□□□ 0.55
PMS1-221ENST00000624204 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.55
PMS1-221ENST00000624204 TTC22Q5TAA0 569 aa18.46■□□□□ 0.55
PMS1-221ENST00000624204 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
PMS1-221ENST00000624204 U2AF2P26368 475 aaKnown RBP eCLIP18.46■□□□□ 0.552e-7■■■■□ 24.4
PMS1-221ENST00000624204 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
PMS1-221ENST00000624204 ARHGAP31Q2M1Z3 1444 aa18.45■□□□□ 0.54
PMS1-221ENST00000624204 ADCY5O95622 1261 aa18.45■□□□□ 0.54
PMS1-221ENST00000624204 MRC2Q9UBG0 1479 aa18.45■□□□□ 0.54
PMS1-221ENST00000624204 ZBTB22O15209 634 aa18.45■□□□□ 0.54
PMS1-221ENST00000624204 HMOX1P09601 288 aa18.44■□□□□ 0.54
PMS1-221ENST00000624204 CHAF1AQ13111 956 aaPredicted RBP18.44■□□□□ 0.54
PMS1-221ENST00000624204 SDSP20132 328 aa18.44■□□□□ 0.54
PMS1-221ENST00000624204 ZNF771Q7L3S4 317 aaPredicted RBP18.44■□□□□ 0.54
PMS1-221ENST00000624204 GADD45BO75293 160 aaPredicted RBP18.43■□□□□ 0.54
PMS1-221ENST00000624204 PHF14O94880 888 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 TMX3Q96JJ7 454 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 CFAP44Q96MT7 982 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 PREX2Q70Z35 1606 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
PMS1-221ENST00000624204 CGNQ9P2M7 1197 aaKnown RBP18.42■□□□□ 0.54
PMS1-221ENST00000624204 IL16Q14005 1332 aa18.42■□□□□ 0.54
PMS1-221ENST00000624204 REC8O95072 547 aa18.42■□□□□ 0.54
PMS1-221ENST00000624204 HCLS1P14317 486 aaPredicted RBP18.42■□□□□ 0.54
PMS1-221ENST00000624204 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
PMS1-221ENST00000624204 AFAP1Q8N556 730 aa18.42■□□□□ 0.54
PMS1-221ENST00000624204 KIF3BO15066 747 aa18.41■□□□□ 0.54
PMS1-221ENST00000624204 PDE4CQ08493 712 aa18.41■□□□□ 0.54
PMS1-221ENST00000624204 SPAG9O60271 1321 aaKnown RBP18.41■□□□□ 0.54
PMS1-221ENST00000624204 PLCD3Q8N3E9 789 aa18.41■□□□□ 0.54
PMS1-221ENST00000624204 CLTCL1P53675 1640 aa18.4■□□□□ 0.54
PMS1-221ENST00000624204 GTF2F1P35269 517 aaKnown RBP eCLIP18.4■□□□□ 0.54
PMS1-221ENST00000624204 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
PMS1-221ENST00000624204 TRPM2O94759 1503 aa18.4■□□□□ 0.54
PMS1-221ENST00000624204 RIOK3O14730 519 aaKnown RBP18.39■□□□□ 0.54
PMS1-221ENST00000624204 TRERF1Q96PN7 1200 aa18.39■□□□□ 0.54
PMS1-221ENST00000624204 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
PMS1-221ENST00000624204 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.53
PMS1-221ENST00000624204 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
PMS1-221ENST00000624204 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
PMS1-221ENST00000624204 UPF3BQ9BZI7 483 aaKnown RBP18.38■□□□□ 0.53
PMS1-221ENST00000624204 VAMP4O75379 141 aa18.38■□□□□ 0.53
PMS1-221ENST00000624204 BRD1O95696 1058 aa18.38■□□□□ 0.53
PMS1-221ENST00000624204 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
PMS1-221ENST00000624204 SRPK2P78362 688 aaKnown RBP18.37■□□□□ 0.53
PMS1-221ENST00000624204 EFCAB2Q5VUJ9 269 aa18.37■□□□□ 0.53
PMS1-221ENST00000624204 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
PMS1-221ENST00000624204 ERC2O15083 957 aa18.37■□□□□ 0.53
PMS1-221ENST00000624204 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
PMS1-221ENST00000624204 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
PMS1-221ENST00000624204 ADGRL1O94910 1474 aa18.36■□□□□ 0.53
PMS1-221ENST00000624204 PRKAR2BP31323 418 aa18.36■□□□□ 0.53
PMS1-221ENST00000624204 NPHP1O15259 732 aa18.36■□□□□ 0.53
PMS1-221ENST00000624204 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
PMS1-221ENST00000624204 DCTPP1Q9H773 170 aa18.36■□□□□ 0.53
PMS1-221ENST00000624204 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
PMS1-221ENST00000624204 ZNF592Q92610 1267 aa18.35■□□□□ 0.53
PMS1-221ENST00000624204 PYCARDQ9ULZ3 195 aa18.34■□□□□ 0.53
PMS1-221ENST00000624204 UVSSAQ2YD98 709 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms