RNA–Protein interactions for RNA: ENST00000622362.1

FAM200B-223, Transcript of family with sequence similarity 200 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-223	ENST00000622362	PDCL3	Q9H2J4	239 aa		14.04	□□□□□ -0.16
FAM200B-223	ENST00000622362	GPRASP1	Q5JY77	1395 aa		14.04	□□□□□ -0.16
FAM200B-223	ENST00000622362	CDR1	P51861	262 aa		14.04	□□□□□ -0.16
FAM200B-223	ENST00000622362	C1orf115	Q9H7X2	142 aa		14.04	□□□□□ -0.16
FAM200B-223	ENST00000622362	TRDN	Q13061	729 aa		14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	ZHX1	Q9UKY1	873 aa	Predicted RBP	14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	HMOX1	P09601	288 aa		14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	MCM2	P49736	904 aa		14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	XPC	Q01831	940 aa	Predicted RBP	14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	COG3	Q96JB2	828 aa		14.03	□□□□□ -0.16
FAM200B-223	ENST00000622362	CCDC192	P0DO97	292 aa		14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	CEBPZ	Q03701	1054 aa	Known RBP	14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	CCDC191	Q8NCU4	936 aa		14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	CCDC141	Q6ZP82	1450 aa		14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	FAM177A1	Q8N128	213 aa	Predicted RBP	14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	ERCC4	Q92889	916 aa	Predicted RBP	14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	PRM3	Q9NNZ6	103 aa		14.02	□□□□□ -0.16
FAM200B-223	ENST00000622362	GNAI1	P63096	354 aa		14.02	□□□□□ -0.17
FAM200B-223	ENST00000622362	G3BP1	Q13283	466 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
FAM200B-223	ENST00000622362	FILIP1	Q7Z7B0	1213 aa		14.02	□□□□□ -0.17
FAM200B-223	ENST00000622362	NEXN	Q0ZGT2	675 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	CAGE1	Q8TC20	777 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	EVC2	Q86UK5	1308 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	MINK1	Q8N4C8	1332 aa	Predicted RBP	14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	EXOSC9	Q06265	439 aa	Known RBP	14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	PDC	P20941	246 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	OLFM4	Q6UX06	510 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	CIZ1	Q9ULV3	898 aa	Predicted RBP	14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	RSPH4A	Q5TD94	716 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	CWC22	Q9HCG8	908 aa	Known RBP	14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	CEP152	O94986	1710 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	PRAG1	Q86YV5	1406 aa		14.01	□□□□□ -0.17
FAM200B-223	ENST00000622362	NEURL4	Q96JN8	1562 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	ERC2	O15083	957 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	MTHFS	P49914	203 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	SYCE3	A1L190	88 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	LRRFIP1	Q32MZ4	808 aa	Known RBP	14	□□□□□ -0.17
FAM200B-223	ENST00000622362	SPHKAP	Q2M3C7	1700 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	SYCP2	Q9BX26	1530 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	CCDC47	Q96A33	483 aa	Known RBP	14	□□□□□ -0.17
FAM200B-223	ENST00000622362	ERCC6L2	Q5T890	1561 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	MYOM1	P52179	1685 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	CLASP1	Q7Z460	1538 aa		14	□□□□□ -0.17
FAM200B-223	ENST00000622362	CT47B1	P0C2W7	299 aa	Predicted RBP	13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	TRERF1	Q96PN7	1200 aa		13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	CGN	Q9P2M7	1197 aa	Known RBP	13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	WASHC2C	Q9Y4E1	1318 aa		13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	ATP2B1	P20020	1258 aa		13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	NFXL1	Q6ZNB6	911 aa		13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	SAFB	Q15424	915 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
FAM200B-223	ENST00000622362	JPH4	Q96JJ6	628 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	GGNBP2	Q9H3C7	697 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	MADD	Q8WXG6	1647 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	VWDE	Q8N2E2	1590 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	BRPF1	P55201	1214 aa	Predicted RBP	13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	A2M	P01023	1474 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	ABCC2	Q92887	1545 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	SURF6	O75683	361 aa	Known RBP	13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	TSR2	Q969E8	191 aa	Known RBP	13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	PLCD4	Q9BRC7	762 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	TNMD	Q9H2S6	317 aa		13.98	□□□□□ -0.17
FAM200B-223	ENST00000622362	PPP2R1A	P30153	589 aa		13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	HSP90AB4P	Q58FF6	505 aa		13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	RALYL	Q86SE5	291 aa	Known RBP	13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	ZCCHC11	Q5TAX3	1644 aa	Known RBP	13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	OFD1	O75665	1012 aa		13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	GTF2E1	P29083	439 aa	Predicted RBP	13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	WDR33	Q9C0J8	1336 aa	Known RBP	13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	IFT172	Q9UG01	1749 aa		13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	DCTN1	Q14203	1278 aa		13.97	□□□□□ -0.17
FAM200B-223	ENST00000622362	KDM4A	O75164	1064 aa		13.96	□□□□□ -0.17
FAM200B-223	ENST00000622362	AEBP1	Q8IUX7	1158 aa		13.96	□□□□□ -0.17
FAM200B-223	ENST00000622362	CLASRP	Q8N2M8	674 aa	Known RBP	13.96	□□□□□ -0.17
FAM200B-223	ENST00000622362	TSPYL4	Q9UJ04	414 aa		13.96	□□□□□ -0.17
FAM200B-223	ENST00000622362	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.96	□□□□□ -0.17
FAM200B-223	ENST00000622362	INSR	P06213	1382 aa		13.96	□□□□□ -0.18
FAM200B-223	ENST00000622362	GCC1	Q96CN9	775 aa		13.96	□□□□□ -0.18
FAM200B-223	ENST00000622362	ABCC1	P33527	1531 aa		13.96	□□□□□ -0.18
FAM200B-223	ENST00000622362	UBTFL1	P0CB47	393 aa	Predicted RBP	13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	PSMA5	P28066	241 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	DHX37	Q8IY37	1157 aa	Known RBP	13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	DEF6	Q9H4E7	631 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	SERPINC1	P01008	464 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	UBXN4	Q92575	508 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	FBXO3	Q9UK99	471 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	KRT85	P78386	507 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	ARAP3	Q8WWN8	1544 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	KIAA1210	Q9ULL0	1709 aa		13.95	□□□□□ -0.18
FAM200B-223	ENST00000622362	CCP110	O43303	1012 aa		13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	CNTROB	Q8N137	903 aa		13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	NEUROD6	Q96NK8	337 aa		13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	FSD1	Q9BTV5	496 aa		13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	NOB1	Q9ULX3	412 aa	Known RBP	13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	STK38	Q15208	465 aa		13.94	□□□□□ -0.18
FAM200B-223	ENST00000622362	ERCC6	Q03468	1493 aa		13.93	□□□□□ -0.18
FAM200B-223	ENST00000622362	UHRF1BP1L	A0JNW5	1464 aa		13.93	□□□□□ -0.18
FAM200B-223	ENST00000622362	PARD3	Q8TEW0	1356 aa		13.93	□□□□□ -0.18
FAM200B-223	ENST00000622362	KIAA0754	O94854	1291 aa		13.93	□□□□□ -0.18
FAM200B-223	ENST00000622362	TAF3	Q5VWG9	929 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms