RNA–Protein interactions for RNA: ENST00000620335.4

RAPGEF5-212, Transcript of Rap guanine nucleotide exchange factor 5, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF5, Length 5,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF5-212ENST00000620335 PARP3Q9Y6F1 533 aa11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 ZNF76P36508 570 aa11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 TEX13AQ9BXU3 409 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 ZNF287Q9HBT7 754 aa11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 MAGI1Q96QZ7 1491 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 SLC4A2P04920 1241 aa11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 FOSBP53539 338 aa11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
RAPGEF5-212ENST00000620335 JDP2Q8WYK2 163 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 SMARCC1Q92922 1105 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 ACSBG1Q96GR2 724 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 GNAT3A8MTJ3 354 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 BECN2A8MW95 431 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 DNMBPQ6XZF7 1577 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 POLR3DP05423 398 aaPredicted RBP11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 USP5P45974 858 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
RAPGEF5-212ENST00000620335 FKBP4Q02790 459 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 DZIP1Q86YF9 867 aaKnown RBP11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 METTL24Q5JXM2 366 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 HIP1O00291 1037 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 FEZ1Q99689 392 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 TDO2P48775 406 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 BIN2Q9UBW5 565 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF5-212ENST00000620335 GOLGA6L19H0YKK7 550 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 PPM1FP49593 454 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 NBPF6Q5VWK0 638 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 NBPF5PQ86XG9 351 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 NBPF4Q96M43 638 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 VTI1AQ96AJ9 217 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 SPINK5Q9NQ38 1064 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 PSMA5P28066 241 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 GPR162Q16538 588 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 USHBP1Q8N6Y0 703 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 TRIM21P19474 475 aaKnown RBP11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 GNAI2P04899 355 aa11.28□□□□□ -0.6
RAPGEF5-212ENST00000620335 OFD1O75665 1012 aa11.27□□□□□ -0.6
RAPGEF5-212ENST00000620335 FOXD4L6Q3SYB3 417 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF5-212ENST00000620335 FOXD4L3Q6VB84 417 aaPredicted RBP11.27□□□□□ -0.6
RAPGEF5-212ENST00000620335 ATP2B1P20020 1258 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 MATR3P43243 847 aaKnown RBP eCLIP11.27□□□□□ -0.612e-7■■■■□ 20.5
RAPGEF5-212ENST00000620335 TNIP1Q15025 636 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 PPP1R42Q7Z4L9 355 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 CNTLNQ9NXG0 1405 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 TXLNAP40222 546 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 IFNL2Q8IZJ0 200 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 TCP11L2Q8N4U5 519 aa11.27□□□□□ -0.61
RAPGEF5-212ENST00000620335 IDI1Q13907 227 aa11.26□□□□□ -0.61
RAPGEF5-212ENST00000620335 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
RAPGEF5-212ENST00000620335 KIF21BO75037 1637 aa11.26□□□□□ -0.61
RAPGEF5-212ENST00000620335 IDH1O75874 414 aaKnown RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 ATP6V1AP38606 617 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 FMNL2Q96PY5 1086 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 C19orf44Q9H6X5 657 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 HECW1Q76N89 1606 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 BICD2Q8TD16 824 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 SETDB2Q96T68 719 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 MPHOSPH6Q99547 160 aaKnown RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 PPP4R3AQ6IN85 833 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 SMC3Q9UQE7 1217 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 WASLO00401 505 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 CDC5LQ99459 802 aaKnown RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 UBAC1Q9BSL1 405 aa11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 NOP58Q9Y2X3 529 aaKnown RBP11.25□□□□□ -0.61
RAPGEF5-212ENST00000620335 FANCAO15360 1455 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 NBPF1Q3BBV0 1214 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 LRRC9Q6ZRR7 1453 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 GPTP24298 496 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 TRIM22Q8IYM9 498 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 DNAI2Q9GZS0 605 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 PDCL3Q9H2J4 239 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 ZHX3Q9H4I2 956 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 GRIN2AQ12879 1464 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 ARHGEF11O15085 1522 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 CABP5Q9NP86 173 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 AKAP2Q9Y2D5 859 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 CA8P35219 290 aa11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 IFIT5Q13325 482 aaKnown RBP11.24□□□□□ -0.61
RAPGEF5-212ENST00000620335 SYCP1Q15431 976 aa11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 AIDAQ96BJ3 306 aa11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 LARP1Q6PKG0 1096 aaKnown RBP11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF5-212ENST00000620335 SLC5A1P13866 664 aa11.22□□□□□ -0.61
RAPGEF5-212ENST00000620335 CCDC70Q6NSX1 233 aa11.22□□□□□ -0.61
RAPGEF5-212ENST00000620335 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms