RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 ITSN1Q15811 1721 aa21.44■■□□□ 1.02
SEMA3B-213ENST00000618865 NFE2L2Q16236 605 aa21.44■■□□□ 1.02
SEMA3B-213ENST00000618865 CDK12Q9NYV4 1490 aaPredicted RBP21.44■■□□□ 1.02
SEMA3B-213ENST00000618865 ADAMTS13Q76LX8 1427 aa21.43■■□□□ 1.02
SEMA3B-213ENST00000618865 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
SEMA3B-213ENST00000618865 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
SEMA3B-213ENST00000618865 NUTM2FA1L443 756 aa21.42■■□□□ 1.02
SEMA3B-213ENST00000618865 LTKP29376 864 aa21.42■■□□□ 1.02
SEMA3B-213ENST00000618865 COG3Q96JB2 828 aa21.42■■□□□ 1.02
SEMA3B-213ENST00000618865 CEBPAP49715 358 aaPredicted RBP21.41■■□□□ 1.02
SEMA3B-213ENST00000618865 SIRT1Q96EB6 747 aa21.41■■□□□ 1.02
SEMA3B-213ENST00000618865 AATKQ6ZMQ8 1374 aa21.41■■□□□ 1.02
SEMA3B-213ENST00000618865 TSPYL6Q8N831 410 aa21.4■■□□□ 1.02
SEMA3B-213ENST00000618865 DDX19BQ9UMR2 479 aa21.4■■□□□ 1.02
SEMA3B-213ENST00000618865 HDGFP51858 240 aaKnown RBP21.39■■□□□ 1.02
SEMA3B-213ENST00000618865 FAM83GA6ND36 823 aa21.38■■□□□ 1.01
SEMA3B-213ENST00000618865 ELL2O00472 640 aaPredicted RBP21.37■■□□□ 1.01
SEMA3B-213ENST00000618865 ZBTB40Q9NUA8 1239 aa21.37■■□□□ 1.01
SEMA3B-213ENST00000618865 KIF16BQ96L93 1317 aa21.37■■□□□ 1.01
SEMA3B-213ENST00000618865 ALDH1L2Q3SY69 923 aa21.37■■□□□ 1.01
SEMA3B-213ENST00000618865 VAMP4O75379 141 aa21.36■■□□□ 1.01
SEMA3B-213ENST00000618865 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-213ENST00000618865 SLC26A8Q96RN1 970 aa21.36■■□□□ 1.01
SEMA3B-213ENST00000618865 BCL11BQ9C0K0 894 aaPredicted RBP21.36■■□□□ 1.01
SEMA3B-213ENST00000618865 MBIPQ9NS73 344 aa21.36■■□□□ 1.01
SEMA3B-213ENST00000618865 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
SEMA3B-213ENST00000618865 DCTN1Q14203 1278 aa21.35■■□□□ 1.01
SEMA3B-213ENST00000618865 RTN4Q9NQC3 1192 aaKnown RBP21.35■■□□□ 1.01
SEMA3B-213ENST00000618865 PTPRUQ92729 1446 aa21.35■■□□□ 1.01
SEMA3B-213ENST00000618865 NRKQ7Z2Y5 1582 aa21.35■■□□□ 1.01
SEMA3B-213ENST00000618865 ACEP12821 1306 aa21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 AEBP1Q8IUX7 1158 aa21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 IPO8O15397 1037 aaKnown RBP21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 ZNF853P0CG23 659 aa21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 NFKBIBQ15653 356 aa21.34■■□□□ 1.01
SEMA3B-213ENST00000618865 ZNF692Q9BU19 519 aaPredicted RBP21.33■■□□□ 1.01
SEMA3B-213ENST00000618865 TTC21BQ7Z4L5 1316 aa21.33■■□□□ 1
SEMA3B-213ENST00000618865 MRPL50Q8N5N7 158 aaKnown RBP21.33■■□□□ 1
SEMA3B-213ENST00000618865 USP35Q9P2H5 1018 aa21.33■■□□□ 1
SEMA3B-213ENST00000618865 IFT57Q9NWB7 429 aa21.32■■□□□ 1
SEMA3B-213ENST00000618865 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
SEMA3B-213ENST00000618865 GNAI1P63096 354 aa21.31■■□□□ 1
SEMA3B-213ENST00000618865 C8orf58Q8NAV2 365 aa21.31■■□□□ 1
SEMA3B-213ENST00000618865 EIF4A2Q14240 407 aaKnown RBP21.31■■□□□ 1
SEMA3B-213ENST00000618865 SMC5Q8IY18 1101 aa21.3■■□□□ 1
SEMA3B-213ENST00000618865 PEAK1Q9H792 1746 aa21.3■■□□□ 1
SEMA3B-213ENST00000618865 BRPF1P55201 1214 aaPredicted RBP21.29■■□□□ 1
SEMA3B-213ENST00000618865 SOX12O15370 315 aa21.29■■□□□ 1
SEMA3B-213ENST00000618865 C1orf115Q9H7X2 142 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 OVOS2A0A0J9YW53 1432 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 OVOS2Q6IE36 1432 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 CALD1Q05682 793 aaKnown RBP21.28■■□□□ 1
SEMA3B-213ENST00000618865 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 CFAP44Q96MT7 982 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 TBC1D32Q96NH3 1257 aa21.28■■□□□ 1
SEMA3B-213ENST00000618865 TWISTNBQ3B726 338 aaPredicted RBP21.27■■□□□ 1
SEMA3B-213ENST00000618865 USP6P35125 1406 aa21.27■■□□□ 1
SEMA3B-213ENST00000618865 PLEKHG3A1L390 1219 aa21.27■■□□□ 1
SEMA3B-213ENST00000618865 HSP90AB2PQ58FF8 381 aa21.27■■□□□ 1
SEMA3B-213ENST00000618865 PTCH1Q13635 1447 aa21.26■□□□□ 0.99
SEMA3B-213ENST00000618865 ZBTB7BO15156 539 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-213ENST00000618865 ZNF428Q96B54 188 aa21.26■□□□□ 0.99
SEMA3B-213ENST00000618865 FGD1P98174 961 aa21.25■□□□□ 0.99
SEMA3B-213ENST00000618865 RGPD8O14715 1765 aaPredicted RBP21.25■□□□□ 0.99
SEMA3B-213ENST00000618865 NALCNQ8IZF0 1738 aa21.25■□□□□ 0.99
SEMA3B-213ENST00000618865 AMOTL2Q9Y2J4 779 aa21.25■□□□□ 0.99
SEMA3B-213ENST00000618865 KRT24Q2M2I5 525 aa21.24■□□□□ 0.99
SEMA3B-213ENST00000618865 LNPKQ9C0E8 428 aa21.24■□□□□ 0.99
SEMA3B-213ENST00000618865 FRAT2O75474 233 aaPredicted RBP21.23■□□□□ 0.99
SEMA3B-213ENST00000618865 LMOD3Q0VAK6 560 aa21.23■□□□□ 0.99
SEMA3B-213ENST00000618865 PIK3R4Q99570 1358 aa21.23■□□□□ 0.99
SEMA3B-213ENST00000618865 NUCB1Q02818 461 aa21.23■□□□□ 0.99
SEMA3B-213ENST00000618865 ABCC4O15439 1325 aa21.22■□□□□ 0.99
SEMA3B-213ENST00000618865 MCM10Q7L590 875 aa21.22■□□□□ 0.99
SEMA3B-213ENST00000618865 ARHGAP45Q92619 1136 aa21.22■□□□□ 0.99
SEMA3B-213ENST00000618865 UPF2Q9HAU5 1272 aaKnown RBP21.22■□□□□ 0.99
SEMA3B-213ENST00000618865 SSH2Q76I76 1423 aa21.21■□□□□ 0.99
SEMA3B-213ENST00000618865 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
SEMA3B-213ENST00000618865 EID1Q9Y6B2 187 aa21.21■□□□□ 0.99
SEMA3B-213ENST00000618865 RIMS1Q86UR5 1692 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-213ENST00000618865 MFAP1P55081 439 aaKnown RBP21.2■□□□□ 0.98
SEMA3B-213ENST00000618865 SIRT2Q8IXJ6 389 aa21.2■□□□□ 0.98
SEMA3B-213ENST00000618865 SLKQ9H2G2 1235 aaPredicted RBP21.19■□□□□ 0.98
SEMA3B-213ENST00000618865 ZMYND15Q9H091 742 aa21.19■□□□□ 0.98
SEMA3B-213ENST00000618865 SLIT1O75093 1534 aa21.19■□□□□ 0.98
SEMA3B-213ENST00000618865 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
SEMA3B-213ENST00000618865 ARHGAP23Q9P227 1491 aa21.19■□□□□ 0.98
SEMA3B-213ENST00000618865 CHD1LQ86WJ1 897 aa21.18■□□□□ 0.98
SEMA3B-213ENST00000618865 TBC1D2Q9BYX2 928 aa21.18■□□□□ 0.98
SEMA3B-213ENST00000618865 BECN1Q14457 450 aa21.18■□□□□ 0.98
SEMA3B-213ENST00000618865 MAP3K19Q56UN5 1328 aa21.17■□□□□ 0.98
SEMA3B-213ENST00000618865 IL27Q8NEV9 243 aa21.17■□□□□ 0.98
SEMA3B-213ENST00000618865 FER1L4A9Z1Z3 1794 aa21.17■□□□□ 0.98
SEMA3B-213ENST00000618865 DIP2AQ14689 1571 aa21.17■□□□□ 0.98
SEMA3B-213ENST00000618865 FMN2Q9NZ56 1722 aa21.16■□□□□ 0.98
SEMA3B-213ENST00000618865 FOXO3O43524 673 aa21.16■□□□□ 0.98
SEMA3B-213ENST00000618865 ANKRD45Q5TZF3 282 aa21.15■□□□□ 0.98
SEMA3B-213ENST00000618865 ARXQ96QS3 562 aa21.15■□□□□ 0.98
SEMA3B-213ENST00000618865 C22orf23Q9BZE7 217 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms