RNA–Protein interactions for RNA: ENST00000617769.1

PCDHA13-203, Transcript of protocadherin alpha 13, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA13, Length 2,427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-203ENST00000617769 TRIM27P14373 513 aa25.38■■□□□ 1.65
PCDHA13-203ENST00000617769 IL13P35225 146 aa25.38■■□□□ 1.65
PCDHA13-203ENST00000617769 TBX22Q9Y458 520 aa25.38■■□□□ 1.65
PCDHA13-203ENST00000617769 LRRC7Q96NW7 1537 aa25.37■■□□□ 1.65
PCDHA13-203ENST00000617769 ARHGAP23Q9P227 1491 aa25.37■■□□□ 1.65
PCDHA13-203ENST00000617769 THUMPD2Q9BTF0 503 aaKnown RBP25.37■■□□□ 1.65
PCDHA13-203ENST00000617769 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
PCDHA13-203ENST00000617769 SLIT1O75093 1534 aa25.36■■□□□ 1.65
PCDHA13-203ENST00000617769 BECN1Q14457 450 aa25.36■■□□□ 1.65
PCDHA13-203ENST00000617769 UPF2Q9HAU5 1272 aaKnown RBP25.36■■□□□ 1.65
PCDHA13-203ENST00000617769 MON2Q7Z3U7 1717 aa25.35■■□□□ 1.65
PCDHA13-203ENST00000617769 PNNQ9H307 717 aaKnown RBP25.35■■□□□ 1.65
PCDHA13-203ENST00000617769 ITPRIPQ8IWB1 547 aa25.34■■□□□ 1.65
PCDHA13-203ENST00000617769 TBC1D32Q96NH3 1257 aa25.34■■□□□ 1.65
PCDHA13-203ENST00000617769 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.65
PCDHA13-203ENST00000617769 PLEKHG3A1L390 1219 aa25.33■■□□□ 1.64
PCDHA13-203ENST00000617769 SLKQ9H2G2 1235 aaPredicted RBP25.33■■□□□ 1.64
PCDHA13-203ENST00000617769 NOB1Q9ULX3 412 aaKnown RBP25.33■■□□□ 1.64
PCDHA13-203ENST00000617769 ITSN1Q15811 1721 aa25.33■■□□□ 1.64
PCDHA13-203ENST00000617769 KCNA6P17658 529 aa25.32■■□□□ 1.64
PCDHA13-203ENST00000617769 AKAP12Q02952 1782 aa25.32■■□□□ 1.64
PCDHA13-203ENST00000617769 AATKQ6ZMQ8 1374 aa25.32■■□□□ 1.64
PCDHA13-203ENST00000617769 RBM33Q96EV2 1170 aaKnown RBP25.32■■□□□ 1.64
PCDHA13-203ENST00000617769 IL16Q14005 1332 aa25.31■■□□□ 1.64
PCDHA13-203ENST00000617769 RTN4Q9NQC3 1192 aaKnown RBP25.31■■□□□ 1.64
PCDHA13-203ENST00000617769 DDX19BQ9UMR2 479 aa25.31■■□□□ 1.64
PCDHA13-203ENST00000617769 NFE2L2Q16236 605 aa25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 BRPF3Q9ULD4 1205 aa25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 CDK12Q9NYV4 1490 aaPredicted RBP25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 USP6P35125 1406 aa25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 HDAC1Q13547 482 aaPredicted RBP25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 TMEM57Q8N5G2 664 aa25.28■■□□□ 1.64
PCDHA13-203ENST00000617769 AEBP1Q8IUX7 1158 aa25.27■■□□□ 1.64
PCDHA13-203ENST00000617769 NGDNQ8NEJ9 315 aaKnown RBP25.27■■□□□ 1.64
PCDHA13-203ENST00000617769 HSP90AB2PQ58FF8 381 aa25.25■■□□□ 1.63
PCDHA13-203ENST00000617769 TBC1D2Q9BYX2 928 aa25.25■■□□□ 1.63
PCDHA13-203ENST00000617769 FAM83GA6ND36 823 aa25.25■■□□□ 1.63
PCDHA13-203ENST00000617769 EIF4A2Q14240 407 aaKnown RBP25.25■■□□□ 1.63
PCDHA13-203ENST00000617769 TOPAZ1Q8N9V7 1692 aa25.24■■□□□ 1.63
PCDHA13-203ENST00000617769 DCTN1Q14203 1278 aa25.24■■□□□ 1.63
PCDHA13-203ENST00000617769 ANTXR1Q9H6X2 564 aa25.24■■□□□ 1.63
PCDHA13-203ENST00000617769 ZBTB40Q9NUA8 1239 aa25.23■■□□□ 1.63
PCDHA13-203ENST00000617769 RIMS1Q86UR5 1692 aaKnown RBP25.23■■□□□ 1.63
PCDHA13-203ENST00000617769 PTCH1Q13635 1447 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 NUTM2GQ5VZR2 741 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 KIF16BQ96L93 1317 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 ELL2O00472 640 aaPredicted RBP25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 OVOS2A0A0J9YW53 1432 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 OVOS2Q6IE36 1432 aa25.22■■□□□ 1.63
PCDHA13-203ENST00000617769 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
PCDHA13-203ENST00000617769 SMC5Q8IY18 1101 aa25.21■■□□□ 1.63
PCDHA13-203ENST00000617769 CEP170BQ9Y4F5 1589 aaPredicted RBP25.21■■□□□ 1.63
PCDHA13-203ENST00000617769 NRKQ7Z2Y5 1582 aa25.21■■□□□ 1.63
PCDHA13-203ENST00000617769 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
PCDHA13-203ENST00000617769 IPO8O15397 1037 aaKnown RBP25.2■■□□□ 1.62
PCDHA13-203ENST00000617769 MFAP1P55081 439 aaKnown RBP25.2■■□□□ 1.62
PCDHA13-203ENST00000617769 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
PCDHA13-203ENST00000617769 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
PCDHA13-203ENST00000617769 SSH2Q76I76 1423 aa25.18■■□□□ 1.62
PCDHA13-203ENST00000617769 ALDH1L2Q3SY69 923 aa25.17■■□□□ 1.62
PCDHA13-203ENST00000617769 ANKLE2Q86XL3 938 aa25.16■■□□□ 1.62
PCDHA13-203ENST00000617769 SPRYD3Q8NCJ5 442 aa25.16■■□□□ 1.62
PCDHA13-203ENST00000617769 MBIPQ9NS73 344 aa25.16■■□□□ 1.62
PCDHA13-203ENST00000617769 MAP3K19Q56UN5 1328 aa25.16■■□□□ 1.62
PCDHA13-203ENST00000617769 XRN1Q8IZH2 1706 aaKnown RBP25.13■■□□□ 1.61
PCDHA13-203ENST00000617769 PEAK1Q9H792 1746 aa25.13■■□□□ 1.61
PCDHA13-203ENST00000617769 NLRP6P59044 892 aa25.13■■□□□ 1.61
PCDHA13-203ENST00000617769 USP31Q70CQ4 1352 aa25.12■■□□□ 1.61
PCDHA13-203ENST00000617769 LNPKQ9C0E8 428 aa25.12■■□□□ 1.61
PCDHA13-203ENST00000617769 NUCB1Q02818 461 aa25.11■■□□□ 1.61
PCDHA13-203ENST00000617769 TTC21AQ8NDW8 1320 aa25.11■■□□□ 1.61
PCDHA13-203ENST00000617769 VAMP4O75379 141 aa25.11■■□□□ 1.61
PCDHA13-203ENST00000617769 GNAI1P63096 354 aa25.11■■□□□ 1.61
PCDHA13-203ENST00000617769 IFT57Q9NWB7 429 aa25.11■■□□□ 1.61
PCDHA13-203ENST00000617769 MCM10Q7L590 875 aa25.1■■□□□ 1.61
PCDHA13-203ENST00000617769 C14orf37Q86TY3 774 aa25.1■■□□□ 1.61
PCDHA13-203ENST00000617769 ZNF853P0CG23 659 aa25.09■■□□□ 1.61
PCDHA13-203ENST00000617769 C8orf58Q8NAV2 365 aa25.09■■□□□ 1.61
PCDHA13-203ENST00000617769 AMPHP49418 695 aa25.08■■□□□ 1.61
PCDHA13-203ENST00000617769 BRPF1P55201 1214 aaPredicted RBP25.08■■□□□ 1.61
PCDHA13-203ENST00000617769 CALD1Q05682 793 aaKnown RBP25.08■■□□□ 1.61
PCDHA13-203ENST00000617769 ZNF428Q96B54 188 aa25.08■■□□□ 1.61
PCDHA13-203ENST00000617769 DLG5Q8TDM6 1919 aa25.08■■□□□ 1.61
PCDHA13-203ENST00000617769 CFAP44Q96MT7 982 aa25.07■■□□□ 1.6
PCDHA13-203ENST00000617769 CHD1LQ86WJ1 897 aa25.07■■□□□ 1.6
PCDHA13-203ENST00000617769 ZBTB7BO15156 539 aaPredicted RBP25.06■■□□□ 1.6
PCDHA13-203ENST00000617769 LMOD3Q0VAK6 560 aa25.06■■□□□ 1.6
PCDHA13-203ENST00000617769 ABTB2Q8N961 1025 aa25.06■■□□□ 1.6
PCDHA13-203ENST00000617769 FOXO3O43524 673 aa25.06■■□□□ 1.6
PCDHA13-203ENST00000617769 MRPL50Q8N5N7 158 aaKnown RBP25.06■■□□□ 1.6
PCDHA13-203ENST00000617769 KRT24Q2M2I5 525 aa25.05■■□□□ 1.6
PCDHA13-203ENST00000617769 C1orf115Q9H7X2 142 aa25.05■■□□□ 1.6
PCDHA13-203ENST00000617769 NALCNQ8IZF0 1738 aa25.05■■□□□ 1.6
PCDHA13-203ENST00000617769 TWISTNBQ3B726 338 aaPredicted RBP25.05■■□□□ 1.6
PCDHA13-203ENST00000617769 PIK3R4Q99570 1358 aa25.04■■□□□ 1.6
PCDHA13-203ENST00000617769 PLEKHG5O94827 1062 aa25.04■■□□□ 1.6
PCDHA13-203ENST00000617769 PIK3C2AO00443 1686 aa25.03■■□□□ 1.6
PCDHA13-203ENST00000617769 LTV1Q96GA3 475 aaPredicted RBP25.02■■□□□ 1.6
PCDHA13-203ENST00000617769 EYA1Q99502 592 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms