RNA–Protein interactions for RNA: ENST00000611728.1

AC004241.3-201, humanhuman

BASIC

Gene AC004241.3, Length 517 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004241.3-201ENST00000611728 ATP9BO43861 1147 aa9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 RANGAP1P46060 587 aaPredicted RBP9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 FOXC1Q12948 553 aa9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 CCDC125Q86Z20 511 aa9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 SEPT12Q8IYM1 358 aa9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 KCTD15Q96SI1 283 aaPredicted RBP9.69□□□□□ -0.86
AC004241.3-201ENST00000611728 SKIP12755 728 aa9.68□□□□□ -0.86
AC004241.3-201ENST00000611728 MPNDQ8N594 471 aa9.68□□□□□ -0.86
AC004241.3-201ENST00000611728 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
AC004241.3-201ENST00000611728 ESPNB1AK53 854 aa9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 PIK3CDO00329 1044 aa9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 RGS20O76081 388 aa9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 FSHRP23945 695 aa9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
AC004241.3-201ENST00000611728 ADH1CP00326 375 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 MAP7D1Q3KQU3 841 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 CFAP70Q5T0N1 1121 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 TBC1D9Q6ZT07 1266 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 PLPP7Q8NBV4 271 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 TRIM52Q96A61 297 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 DOLKQ9UPQ8 538 aa9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
AC004241.3-201ENST00000611728 USP17L5A8MUK1 530 aa9.65□□□□□ -0.86
AC004241.3-201ENST00000611728 SIAH2O43255 324 aa9.65□□□□□ -0.86
AC004241.3-201ENST00000611728 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
AC004241.3-201ENST00000611728 RAB15P59190 212 aa9.65□□□□□ -0.86
AC004241.3-201ENST00000611728 PKD2L1Q9P0L9 805 aa9.65□□□□□ -0.86
AC004241.3-201ENST00000611728 USP17L3A6NCW0 530 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 USP17L4A6NCW7 530 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 RFX1P22670 979 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 DHX9Q08211 1270 aaKnown RBP9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 INTS6LQ5JSJ4 861 aaKnown RBP9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 USP17L1Q7RTZ2 530 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
AC004241.3-201ENST00000611728 LZTS3O60299 673 aaPredicted RBP9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 ALDH1A1P00352 501 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 NR5A1Q13285 461 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 CYP4X1Q8N118 509 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 PBXIP1Q96AQ6 731 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 PCDHB11Q9Y5F2 797 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 WASF2Q9Y6W5 498 aa9.63□□□□□ -0.87
AC004241.3-201ENST00000611728 TTC24A2A3L6 582 aaPredicted RBP9.62□□□□□ -0.87
AC004241.3-201ENST00000611728 TNFRSF10AO00220 468 aa9.62□□□□□ -0.87
AC004241.3-201ENST00000611728 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
AC004241.3-201ENST00000611728 EML3Q32P44 896 aa9.62□□□□□ -0.87
AC004241.3-201ENST00000611728 CHIC2Q9UKJ5 165 aa9.62□□□□□ -0.87
AC004241.3-201ENST00000611728 GDF9O60383 454 aa9.61□□□□□ -0.87
AC004241.3-201ENST00000611728 NCOA4Q13772 614 aa9.61□□□□□ -0.87
AC004241.3-201ENST00000611728 OXLD1Q5BKU9 147 aa9.61□□□□□ -0.87
AC004241.3-201ENST00000611728 CCDC116Q8IYX3 515 aa9.61□□□□□ -0.87
AC004241.3-201ENST00000611728 CCDC85AQ96PX6 553 aaPredicted RBP9.61□□□□□ -0.87
AC004241.3-201ENST00000611728 GRM5P41594 1212 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 PRR20EP86478 221 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 PRR20CP86479 221 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 PRR20DP86480 221 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 PRR20BP86481 221 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 PRR20AP86496 221 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 DEPDC4Q8N2C3 294 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 SIRT1Q96EB6 747 aa9.6□□□□□ -0.87
AC004241.3-201ENST00000611728 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.59□□□□□ -0.87
AC004241.3-201ENST00000611728 ERVH48-1M5A8F1 160 aa9.59□□□□□ -0.87
AC004241.3-201ENST00000611728 MYCP01106 439 aaPredicted RBP9.59□□□□□ -0.87
AC004241.3-201ENST00000611728 TRAF7Q6Q0C0 670 aa9.59□□□□□ -0.87
AC004241.3-201ENST00000611728 ESF1Q9H501 851 aaKnown RBP9.59□□□□□ -0.87
AC004241.3-201ENST00000611728 NNTQ13423 1086 aa9.58□□□□□ -0.88
AC004241.3-201ENST00000611728 VRTNQ9H8Y1 702 aa9.58□□□□□ -0.88
AC004241.3-201ENST00000611728 NOD1Q9Y239 953 aa9.58□□□□□ -0.88
AC004241.3-201ENST00000611728 ATP5J2-PTCD1G3V325 749 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 USP4Q13107 963 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 TOR4AQ9NXH8 423 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 PGPEP1Q9NXJ5 209 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 EMILIN1Q9Y6C2 1016 aa9.57□□□□□ -0.88
AC004241.3-201ENST00000611728 NR3C2P08235 984 aa9.56□□□□□ -0.88
AC004241.3-201ENST00000611728 PPP1R26Q5T8A7 1209 aaPredicted RBP9.56□□□□□ -0.88
AC004241.3-201ENST00000611728 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
AC004241.3-201ENST00000611728 ACIN1Q9UKV3 1341 aaKnown RBP9.56□□□□□ -0.88
AC004241.3-201ENST00000611728 ATP1A2P50993 1020 aa9.55□□□□□ -0.88
AC004241.3-201ENST00000611728 TSGA10IPQ3SY00 556 aa9.55□□□□□ -0.88
AC004241.3-201ENST00000611728 TRIM67Q6ZTA4 783 aa9.55□□□□□ -0.88
AC004241.3-201ENST00000611728 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
AC004241.3-201ENST00000611728 J3QL48 77 aa9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 MYT1Q01538 1121 aa9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 CC2D2BQ6DHV5 1058 aa9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 LARP1Q6PKG0 1096 aaKnown RBP9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 CDCA7Q9BWT1 371 aaPredicted RBP9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 CYLDQ9NQC7 956 aa9.54□□□□□ -0.88
AC004241.3-201ENST00000611728 RASA1P20936 1047 aa9.53□□□□□ -0.88
AC004241.3-201ENST00000611728 ERVK-9P63128 1117 aa9.53□□□□□ -0.88
AC004241.3-201ENST00000611728 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
AC004241.3-201ENST00000611728 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
AC004241.3-201ENST00000611728 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
AC004241.3-201ENST00000611728 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
AC004241.3-201ENST00000611728 SMPD1P17405 629 aa9.52□□□□□ -0.89
AC004241.3-201ENST00000611728 GTF2IP78347 998 aa9.52□□□□□ -0.89
AC004241.3-201ENST00000611728 PSME1Q06323 249 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 1652.1 ms