RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 TSPOAP1O95153 1857 aa21.04■□□□□ 0.96
TNIP1-220ENST00000610535 MED14O60244 1454 aa21.04■□□□□ 0.96
TNIP1-220ENST00000610535 STAG3Q9UJ98 1225 aa21.04■□□□□ 0.96
TNIP1-220ENST00000610535 CD163L1Q9NR16 1453 aa21.04■□□□□ 0.96
TNIP1-220ENST00000610535 DDX49Q9Y6V7 483 aaKnown RBP21.03■□□□□ 0.96
TNIP1-220ENST00000610535 NEXMIFQ5QGS0 1516 aa21.03■□□□□ 0.96
TNIP1-220ENST00000610535 BAG4O95429 457 aaKnown RBP21.02■□□□□ 0.96
TNIP1-220ENST00000610535 GSPT1P15170 499 aaKnown RBP21.02■□□□□ 0.96
TNIP1-220ENST00000610535 ZNF428Q96B54 188 aa21.02■□□□□ 0.96
TNIP1-220ENST00000610535 CDC45O75419 566 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 HDGFL2Q7Z4V5 671 aaPredicted RBP21.01■□□□□ 0.95
TNIP1-220ENST00000610535 VSIG10Q8N0Z9 540 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 POLKQ9UBT6 870 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 SIGLEC1Q9BZZ2 1709 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 ATAD2Q6PL18 1390 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 DIP2CQ9Y2E4 1556 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 NASPP49321 788 aaPredicted RBP21.01■□□□□ 0.95
TNIP1-220ENST00000610535 GLIPR1L2Q4G1C9 344 aa21.01■□□□□ 0.95
TNIP1-220ENST00000610535 PTMSP20962 102 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 LRRC7Q96NW7 1537 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 GOLGA6L22H0YM25 854 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 NFE2L2Q16236 605 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 NEO1Q92859 1461 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 CDK19Q9BWU1 502 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 MBIPQ9NS73 344 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 AK9Q5TCS8 1911 aa21■□□□□ 0.95
TNIP1-220ENST00000610535 PLPPR3Q6T4P5 718 aa20.99■□□□□ 0.95
TNIP1-220ENST00000610535 C16orf71Q8IYS4 520 aaPredicted RBP20.99■□□□□ 0.95
TNIP1-220ENST00000610535 CHMP4BQ9H444 224 aaKnown RBP20.99■□□□□ 0.95
TNIP1-220ENST00000610535 RRP9O43818 475 aaKnown RBP20.98■□□□□ 0.95
TNIP1-220ENST00000610535 PLEKHM2Q8IWE5 1019 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 ABCC4O15439 1325 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 KLHL40Q2TBA0 621 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 C8orf58Q8NAV2 365 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
TNIP1-220ENST00000610535 TWISTNBQ3B726 338 aaPredicted RBP20.97■□□□□ 0.95
TNIP1-220ENST00000610535 MCTP1Q6DN14 999 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 CLEC17AQ6ZS10 378 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 PTCH1Q13635 1447 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 NCLP19338 710 aaKnown RBP20.97■□□□□ 0.95
TNIP1-220ENST00000610535 CCDC173Q0VFZ6 552 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 PKP1Q13835 747 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 PPP1R9BQ96SB3 815 aa20.97■□□□□ 0.95
TNIP1-220ENST00000610535 GNAI1P63096 354 aa20.96■□□□□ 0.95
TNIP1-220ENST00000610535 PTPRMP28827 1452 aa20.96■□□□□ 0.95
TNIP1-220ENST00000610535 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
TNIP1-220ENST00000610535 OTUD7AQ8TE49 926 aaPredicted RBP20.94■□□□□ 0.94
TNIP1-220ENST00000610535 IFT57Q9NWB7 429 aa20.94■□□□□ 0.94
TNIP1-220ENST00000610535 FAM83GA6ND36 823 aa20.94■□□□□ 0.94
TNIP1-220ENST00000610535 ZNF853P0CG23 659 aa20.94■□□□□ 0.94
TNIP1-220ENST00000610535 RABEP1Q15276 862 aa20.93■□□□□ 0.94
TNIP1-220ENST00000610535 CAVIN1Q6NZI2 390 aaKnown RBP20.93■□□□□ 0.94
TNIP1-220ENST00000610535 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
TNIP1-220ENST00000610535 USP26Q9BXU7 913 aa20.93■□□□□ 0.94
TNIP1-220ENST00000610535 PIK3C2BO00750 1634 aa20.93■□□□□ 0.94
TNIP1-220ENST00000610535 ZFYVE9O95405 1425 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 CALD1Q05682 793 aaKnown RBP20.92■□□□□ 0.94
TNIP1-220ENST00000610535 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 TTC22Q5TAA0 569 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 ANP32BQ92688 251 aaKnown RBP20.92■□□□□ 0.94
TNIP1-220ENST00000610535 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
TNIP1-220ENST00000610535 DCTPP1Q9H773 170 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 RIMBP3CA6NJZ7 1639 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 RIMBP3BA6NNM3 1639 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 RIMBP3Q9UFD9 1639 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 RICTORQ6R327 1708 aa20.92■□□□□ 0.94
TNIP1-220ENST00000610535 APBB1O00213 710 aa20.91■□□□□ 0.94
TNIP1-220ENST00000610535 KIAA1211Q6ZU35 1233 aa20.91■□□□□ 0.94
TNIP1-220ENST00000610535 ZSCAN30Q86W11 494 aa20.91■□□□□ 0.94
TNIP1-220ENST00000610535 API5Q9BZZ5 524 aaKnown RBP20.91■□□□□ 0.94
TNIP1-220ENST00000610535 LMBRD1Q9NUN5 540 aa20.91■□□□□ 0.94
TNIP1-220ENST00000610535 ZSCAN23Q3MJ62 389 aa20.9■□□□□ 0.94
TNIP1-220ENST00000610535 PKNOX2Q96KN3 472 aa20.9■□□□□ 0.94
TNIP1-220ENST00000610535 ZMYND15Q9H091 742 aa20.9■□□□□ 0.94
TNIP1-220ENST00000610535 IL13P35225 146 aa20.89■□□□□ 0.93
TNIP1-220ENST00000610535 ZGPATQ8N5A5 531 aaKnown RBP20.89■□□□□ 0.93
TNIP1-220ENST00000610535 CHAMP1Q96JM3 812 aa20.89■□□□□ 0.93
TNIP1-220ENST00000610535 CFAP44Q96MT7 982 aa20.89■□□□□ 0.93
TNIP1-220ENST00000610535 ZRANB1Q9UGI0 708 aa20.89■□□□□ 0.93
TNIP1-220ENST00000610535 SMARCA5O60264 1052 aaPredicted RBP20.89■□□□□ 0.93
TNIP1-220ENST00000610535 NUCB2P80303 420 aa20.89■□□□□ 0.93
TNIP1-220ENST00000610535 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.93
TNIP1-220ENST00000610535 CYP2E1P05181 493 aaPredicted RBP20.88■□□□□ 0.93
TNIP1-220ENST00000610535 ZNF445P59923 1031 aa20.88■□□□□ 0.93
TNIP1-220ENST00000610535 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
TNIP1-220ENST00000610535 SLC52A1Q9NWF4 448 aa20.88■□□□□ 0.93
TNIP1-220ENST00000610535 RBSNQ9H1K0 784 aa20.88■□□□□ 0.93
TNIP1-220ENST00000610535 CDC42BPGQ6DT37 1551 aa20.87■□□□□ 0.93
TNIP1-220ENST00000610535 PRPF40AO75400 957 aaKnown RBP20.87■□□□□ 0.93
TNIP1-220ENST00000610535 TPM2P07951 284 aa20.87■□□□□ 0.93
TNIP1-220ENST00000610535 SDSP20132 328 aa20.87■□□□□ 0.93
TNIP1-220ENST00000610535 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
TNIP1-220ENST00000610535 RBM27Q9P2N5 1060 aaKnown RBP20.86■□□□□ 0.93
TNIP1-220ENST00000610535 MSNP26038 577 aaKnown RBP20.86■□□□□ 0.93
TNIP1-220ENST00000610535 INTS3Q68E01 1043 aaKnown RBP20.86■□□□□ 0.93
TNIP1-220ENST00000610535 PRIM1P49642 420 aaKnown RBP20.85■□□□□ 0.93
TNIP1-220ENST00000610535 NME9Q86XW9 330 aa20.85■□□□□ 0.93
TNIP1-220ENST00000610535 ARHGEF40Q8TER5 1519 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms