RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, human

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTCFL-222	ENST00000609232	PNN	Q9H307	717 aa	Known RBP	12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	FOXD4L1	Q9NU39	408 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	PLEKHG3	A1L390	1219 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	PSME1	Q06323	249 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	PDE4C	Q08493	712 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	DUSP27	Q5VZP5	1158 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	ABTB2	Q8N961	1025 aa		12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.57	□□□□□ -0.4
CTCFL-222	ENST00000609232	INSR	P06213	1382 aa		12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	IPO9	Q96P70	1041 aa	Known RBP	12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	SETD1B	Q9UPS6	1966 aa	Known RBP	12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	SETD1A	O15047	1707 aa	Known RBP	12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	FOXO3	O43524	673 aa		12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	EXOSC9	Q06265	439 aa	Known RBP	12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	SLK	Q9H2G2	1235 aa	Predicted RBP	12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	VSIG10	Q8N0Z9	540 aa		12.56	□□□□□ -0.4
CTCFL-222	ENST00000609232	PHF8	Q9UPP1	1060 aa		12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	CPS1	P31327	1500 aa		12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	KAT6B	Q8WYB5	2073 aa		12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	EIF2S2	P20042	333 aa	Known RBP	12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	MED14	O60244	1454 aa		12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	NPHP4	O75161	1426 aa	Predicted RBP	12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	CPSF1	Q10570	1443 aa	Known RBP	12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	MCM10	Q7L590	875 aa		12.55	□□□□□ -0.4
CTCFL-222	ENST00000609232	ZC3H6	P61129	1189 aa	Known RBP	12.54	□□□□□ -0.4
CTCFL-222	ENST00000609232	SULT6B1	Q6IMI4	303 aa		12.54	□□□□□ -0.4
CTCFL-222	ENST00000609232	AEBP1	Q8IUX7	1158 aa		12.54	□□□□□ -0.4
CTCFL-222	ENST00000609232	TMPO	P42166	694 aa	Known RBP	12.53	□□□□□ -0.4
CTCFL-222	ENST00000609232	PIK3R4	Q99570	1358 aa		12.52	□□□□□ -0.4
CTCFL-222	ENST00000609232	UTRN	P46939	3433 aa		12.52	□□□□□ -0.4
CTCFL-222	ENST00000609232	MYH16	Q9H6N6	1097 aa		12.52	□□□□□ -0.41
CTCFL-222	ENST00000609232	PTCH1	Q13635	1447 aa		12.52	□□□□□ -0.41
CTCFL-222	ENST00000609232	FCHSD2	O94868	740 aa		12.52	□□□□□ -0.41
CTCFL-222	ENST00000609232	HSP90AB2P	Q58FF8	381 aa		12.52	□□□□□ -0.41
CTCFL-222	ENST00000609232	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.51	□□□□□ -0.41
CTCFL-222	ENST00000609232	ZNF521	Q96K83	1311 aa		12.51	□□□□□ -0.41
CTCFL-222	ENST00000609232	ATF3	P18847	181 aa		12.51	□□□□□ -0.41
CTCFL-222	ENST00000609232	USP6	P35125	1406 aa		12.51	□□□□□ -0.41
CTCFL-222	ENST00000609232	ADAMTSL3	P82987	1691 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	CSB-PGBD3	P0DP91	1061 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	CABLES1	Q8TDN4	633 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	ORAI2	Q96SN7	254 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	USP32	Q8NFA0	1604 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	PHACTR3	Q96KR7	559 aa		12.5	□□□□□ -0.41
CTCFL-222	ENST00000609232	WDR63	Q8IWG1	891 aa		12.49	□□□□□ -0.41
CTCFL-222	ENST00000609232	TTC21A	Q8NDW8	1320 aa		12.49	□□□□□ -0.41
CTCFL-222	ENST00000609232	CDC42BPG	Q6DT37	1551 aa		12.49	□□□□□ -0.41
CTCFL-222	ENST00000609232	KNDC1	Q76NI1	1749 aa		12.49	□□□□□ -0.41
CTCFL-222	ENST00000609232	ANXA1	P04083	346 aa		12.49	□□□□□ -0.41
CTCFL-222	ENST00000609232	IL13	P35225	146 aa		12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	NOL8	Q76FK4	1167 aa	Known RBP	12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	PDE4A	P27815	886 aa		12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	RNF123	Q5XPI4	1314 aa		12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	EIF4A2	Q14240	407 aa	Known RBP	12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	LNPK	Q9C0E8	428 aa		12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	MAP3K19	Q56UN5	1328 aa		12.48	□□□□□ -0.41
CTCFL-222	ENST00000609232	DIP2A	Q14689	1571 aa		12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	NKTR	P30414	1462 aa	Known RBP	12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	PIP4K2A	P48426	406 aa	Predicted RBP	12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	RSPH6A	Q9H0K4	717 aa		12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	MFAP1	P55081	439 aa	Known RBP	12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	PLEKHF1	Q96S99	279 aa		12.47	□□□□□ -0.41
CTCFL-222	ENST00000609232	DTNB	O60941	627 aa		12.46	□□□□□ -0.42
CTCFL-222	ENST00000609232	RLBP1	P12271	317 aa		12.46	□□□□□ -0.42
CTCFL-222	ENST00000609232	NFE2L2	Q16236	605 aa		12.46	□□□□□ -0.42
CTCFL-222	ENST00000609232	C19orf44	Q9H6X5	657 aa		12.46	□□□□□ -0.42
CTCFL-222	ENST00000609232	AATK	Q6ZMQ8	1374 aa		12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	HSP90AA1	P07900	732 aa	Known RBP	12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	CCDC27	Q2M243	656 aa		12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	RTF1	Q92541	710 aa	Known RBP	12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	TRIM35	Q9UPQ4	493 aa		12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	PNPLA6	Q8IY17	1366 aa		12.45	□□□□□ -0.42
CTCFL-222	ENST00000609232	AIMP1	Q12904	312 aa	Known RBP	12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	TSPYL6	Q8N831	410 aa		12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	NOB1	Q9ULX3	412 aa	Known RBP	12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	KIF20B	Q96Q89	1820 aa		12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	TRMT2A	Q8IZ69	625 aa	Known RBP	12.44	□□□□□ -0.42
CTCFL-222	ENST00000609232	IGHD	P01880	384 aa		12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	CHRNA2	Q15822	529 aa		12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	ITSN1	Q15811	1721 aa		12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232		F6X3S4	739 aa		12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	KRT28	Q7Z3Y7	464 aa		12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	DHX37	Q8IY37	1157 aa	Known RBP	12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	JARID2	Q92833	1246 aa	Predicted RBP	12.43	□□□□□ -0.42
CTCFL-222	ENST00000609232	ANKAR	Q7Z5J8	1434 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	ADGRL3	Q9HAR2	1447 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	KDM4F	A0A1W2PPD8	638 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	CALD1	Q05682	793 aa	Known RBP	12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	LMOD3	Q0VAK6	560 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	ZMYND15	Q9H091	742 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	MAP2	P11137	1827 aa	Known RBP	12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	TMEM94	Q12767	1356 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	SHPRH	Q149N8	1683 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	ANKRD45	Q5TZF3	282 aa		12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	GZF1	Q9H116	711 aa	Predicted RBP	12.42	□□□□□ -0.42
CTCFL-222	ENST00000609232	ADGRB2	O60241	1585 aa		12.41	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms