RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 TNS3Q68CZ2 1445 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 RGPD1P0DJD0 1748 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 SLIT2O94813 1529 aa6.81□□□□□ -1.32
SSX9-202ENST00000608568 KAT6BQ8WYB5 2073 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 ANP32AP39687 249 aaKnown RBP6.8□□□□□ -1.32
SSX9-202ENST00000608568 CFAP70Q5T0N1 1121 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 LMOD2Q6P5Q4 547 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 UPF1Q92900 1129 aaKnown RBP eCLIP6.8□□□□□ -1.32
SSX9-202ENST00000608568 IPO9Q96P70 1041 aaKnown RBP6.8□□□□□ -1.32
SSX9-202ENST00000608568 PIK3C2AO00443 1686 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 LMO7Q8WWI1 1683 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 LTN1O94822 1766 aa6.8□□□□□ -1.32
SSX9-202ENST00000608568 MON2Q7Z3U7 1717 aa6.79□□□□□ -1.32
SSX9-202ENST00000608568 PPM1GO15355 546 aaPredicted RBP6.79□□□□□ -1.32
SSX9-202ENST00000608568 SAFB2Q14151 953 aaKnown RBP eCLIP6.79□□□□□ -1.32
SSX9-202ENST00000608568 ZNF772Q68DY9 489 aaPredicted RBP6.79□□□□□ -1.32
SSX9-202ENST00000608568 COL18A1P39060 1754 aa6.79□□□□□ -1.32
SSX9-202ENST00000608568 RALGAPBQ86X10 1494 aa6.79□□□□□ -1.32
SSX9-202ENST00000608568 PRR36Q9H6K5 1346 aa6.78□□□□□ -1.32
SSX9-202ENST00000608568 RREB1Q92766 1687 aa6.78□□□□□ -1.32
SSX9-202ENST00000608568 CHRM1P11229 460 aaPredicted RBP6.78□□□□□ -1.32
SSX9-202ENST00000608568 CLCN6P51797 869 aa6.78□□□□□ -1.32
SSX9-202ENST00000608568 ESCO1Q5FWF5 840 aa6.78□□□□□ -1.32
SSX9-202ENST00000608568 LRRC59Q96AG4 307 aaKnown RBP6.78□□□□□ -1.32
SSX9-202ENST00000608568 NUP188Q5SRE5 1749 aa6.78□□□□□ -1.32
SSX9-202ENST00000608568 NPHP3Q7Z494 1330 aa6.77□□□□□ -1.32
SSX9-202ENST00000608568 RGPD2P0DJD1 1756 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 ANKARQ7Z5J8 1434 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 FOXO3O43524 673 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 RXRBP28702 533 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 BRPF1P55201 1214 aaPredicted RBP6.77□□□□□ -1.33
SSX9-202ENST00000608568 PRAM1Q96QH2 718 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 C14orf93Q9H972 538 aaKnown RBP6.77□□□□□ -1.33
SSX9-202ENST00000608568 WDR70Q9NW82 654 aa6.77□□□□□ -1.33
SSX9-202ENST00000608568 SPATA31A3Q5VYP0 1347 aa6.76□□□□□ -1.33
SSX9-202ENST00000608568 PARP4Q9UKK3 1724 aaKnown RBP6.76□□□□□ -1.33
SSX9-202ENST00000608568 ANP32CO43423 234 aa6.76□□□□□ -1.33
SSX9-202ENST00000608568 STK24Q9Y6E0 443 aa6.76□□□□□ -1.33
SSX9-202ENST00000608568 USP54Q70EL1 1684 aa6.76□□□□□ -1.33
SSX9-202ENST00000608568 LRRC37A3O60309 1634 aa6.76□□□□□ -1.33
SSX9-202ENST00000608568 RBM6P78332 1123 aaKnown RBP6.75□□□□□ -1.33
SSX9-202ENST00000608568 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
SSX9-202ENST00000608568 CABLES1Q8TDN4 633 aa6.75□□□□□ -1.33
SSX9-202ENST00000608568 NGLY1Q96IV0 654 aa6.75□□□□□ -1.33
SSX9-202ENST00000608568 HIRIP3Q9BW71 556 aaPredicted RBP6.75□□□□□ -1.33
SSX9-202ENST00000608568 QTRT2Q9H974 415 aaKnown RBP6.75□□□□□ -1.33
SSX9-202ENST00000608568 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
SSX9-202ENST00000608568 PEAK1Q9H792 1746 aa6.75□□□□□ -1.33
SSX9-202ENST00000608568 MINK1Q8N4C8 1332 aaPredicted RBP6.75□□□□□ -1.33
SSX9-202ENST00000608568 FNBP4Q8N3X1 1017 aaPredicted RBP6.74□□□□□ -1.33
SSX9-202ENST00000608568 PMFBP1Q8TBY8 1022 aa6.74□□□□□ -1.33
SSX9-202ENST00000608568 BCL11BQ9C0K0 894 aaPredicted RBP6.74□□□□□ -1.33
SSX9-202ENST00000608568 USP21Q9UK80 565 aa6.74□□□□□ -1.33
SSX9-202ENST00000608568 TRAK1Q9UPV9 953 aa6.74□□□□□ -1.33
SSX9-202ENST00000608568 LRP5O75197 1615 aa6.74□□□□□ -1.33
SSX9-202ENST00000608568 TUBGCP6Q96RT7 1819 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 SBNO1A3KN83 1393 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 IL27Q8NEV9 243 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 FAM212AQ96EL1 285 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 PHF8Q9UPP1 1060 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 SHANK3Q9BYB0 1731 aa6.73□□□□□ -1.33
SSX9-202ENST00000608568 ATAD2Q6PL18 1390 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.72□□□□□ -1.33
SSX9-202ENST00000608568 POTEIP0CG38 1075 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 KRT28Q7Z3Y7 464 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 KCNV2Q8TDN2 545 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 DCAF11Q8TEB1 546 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 ZFP91Q96JP5 570 aaPredicted RBP6.72□□□□□ -1.33
SSX9-202ENST00000608568 RGPD3A6NKT7 1758 aaPredicted RBP6.72□□□□□ -1.33
SSX9-202ENST00000608568 RGPD4Q7Z3J3 1758 aa6.72□□□□□ -1.33
SSX9-202ENST00000608568 RRP9O43818 475 aaKnown RBP6.71□□□□□ -1.34
SSX9-202ENST00000608568 CHADLQ6NUI6 762 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 SIRT1Q96EB6 747 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 TRPC5Q9UL62 973 aaPredicted RBP6.71□□□□□ -1.34
SSX9-202ENST00000608568 KIF20BQ96Q89 1820 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 MYOM1P52179 1685 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 CAMTA1Q9Y6Y1 1673 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 SLIT3O75094 1523 aa6.71□□□□□ -1.34
SSX9-202ENST00000608568 ARHGEF10O15013 1369 aa6.7□□□□□ -1.34
SSX9-202ENST00000608568 NBPF1Q3BBV0 1214 aa6.7□□□□□ -1.34
SSX9-202ENST00000608568 ZC3H15Q8WU90 426 aaKnown RBP6.7□□□□□ -1.34
SSX9-202ENST00000608568 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 CD44P16070 742 aaKnown RBP6.69□□□□□ -1.34
SSX9-202ENST00000608568 NEUROD2Q15784 382 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 UNC5CLQ8IV45 518 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 GJD4Q96KN9 370 aaPredicted RBP6.69□□□□□ -1.34
SSX9-202ENST00000608568 DCBLD2Q96PD2 775 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 POGKQ9P215 609 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 NFAT5O94916 1531 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 CASZ1Q86V15 1759 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 BTAF1O14981 1849 aa6.69□□□□□ -1.34
SSX9-202ENST00000608568 VIRMAQ69YN4 1812 aaKnown RBP6.69□□□□□ -1.34
SSX9-202ENST00000608568 POLR3AO14802 1390 aaPredicted RBP6.69□□□□□ -1.34
SSX9-202ENST00000608568 FAM83GA6ND36 823 aa6.68□□□□□ -1.34
SSX9-202ENST00000608568 WASLO00401 505 aaPredicted RBP6.68□□□□□ -1.34
SSX9-202ENST00000608568 NEFMP07197 916 aa6.68□□□□□ -1.34
SSX9-202ENST00000608568 DDRGK1Q96HY6 314 aa6.68□□□□□ -1.34
SSX9-202ENST00000608568 GOLGB1Q14789 3259 aaKnown RBP6.68□□□□□ -1.34
SSX9-202ENST00000608568 EIF3AQ14152 1382 aaKnown RBP6.68□□□□□ -1.34
SSX9-202ENST00000608568 KIAA0232Q92628 1395 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms