RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 NUP214P35658 2090 aaPredicted RBP8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 SUDS3Q9H7L9 328 aaPredicted RBP8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 MED12Q93074 2177 aa8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 TMX4Q9H1E5 349 aaPredicted RBP8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 OLFM4Q6UX06 510 aa8.35□□□□□ -1.07
CNKSR3-205ENST00000607772 TTC3P53804 2025 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 SEPT6Q14141 434 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 CCDC144AA2RUR9 1427 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 NUTM2GQ5VZR2 741 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 SPDYE4A6NLX3 237 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 MCM3P25205 808 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 LMAN1P49257 510 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 C1orf115Q9H7X2 142 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 SMARCA2P51531 1590 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 KINO60870 393 aaKnown RBP8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 PDILTQ8N807 584 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 C1orf141Q5JVX7 400 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 CRACR2AQ9BSW2 395 aa8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
CNKSR3-205ENST00000607772 LRCH2Q5VUJ6 765 aa8.34□□□□□ -1.08
CNKSR3-205ENST00000607772 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.34□□□□□ -1.08
CNKSR3-205ENST00000607772 RAD21O60216 631 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 IBSPP21815 317 aaPredicted RBP8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 MIPOL1Q8TD10 442 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 ODF2Q5BJF6 829 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 CCDC7Q96M83 1385 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 GBP6Q6ZN66 633 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 SMC3Q9UQE7 1217 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 ADAMTS8Q9UP79 889 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 CCDC27Q2M243 656 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 PSMD1Q99460 953 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 PDCP20941 246 aa8.33□□□□□ -1.08
CNKSR3-205ENST00000607772 ZFP91Q96JP5 570 aaPredicted RBP8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 CABP2Q9NPB3 220 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 G3BP1Q13283 466 aaKnown RBP eCLIP8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 A0A1B0GUL7 405 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 FILIP1Q7Z7B0 1213 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 GOLGA6L9A6NEM1 432 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 CPLX1O14810 134 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 IFIT2P09913 472 aaKnown RBP8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 EVA1CP58658 441 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 JPH4Q96JJ6 628 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 CACNA1DQ01668 2161 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 JAKMIP3Q5VZ66 844 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 MCM2P49736 904 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 ZNF644Q9H582 1327 aaPredicted RBP8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 MTMR7Q9Y216 660 aa8.32□□□□□ -1.08
CNKSR3-205ENST00000607772 AIMP1Q12904 312 aaKnown RBP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 FEZ1Q99689 392 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 APC2O95996 2303 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 BMS1Q14692 1282 aaKnown RBP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 MYH3P11055 1940 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 EVC2Q86UK5 1308 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 PDZRN3Q9UPQ7 1066 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 INTS3Q68E01 1043 aaKnown RBP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 ZNF622Q969S3 477 aaKnown RBP eCLIP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 BCCIPQ9P287 314 aaKnown RBP eCLIP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 ROCK1Q13464 1354 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 NFXL1Q6ZNB6 911 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 SDF4Q9BRK5 362 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 AKNAQ7Z591 1439 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 PRPF40AO75400 957 aaKnown RBP8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 FAM114A1Q8IWE2 563 aa8.31□□□□□ -1.08
CNKSR3-205ENST00000607772 FKBP5Q13451 457 aaPredicted RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 TSPYL4Q9UJ04 414 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 V9GYY5 206 aaPredicted RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 CCAR1Q8IX12 1150 aaKnown RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 FYB1O15117 783 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 PTPN14Q15678 1187 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 DDX19BQ9UMR2 479 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 SYTL4Q96C24 671 aaPredicted RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 RSRC1Q96IZ7 334 aaKnown RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 PAXBP1Q9Y5B6 917 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 A0A1B0GUA9 196 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 CDC45O75419 566 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 HS1BP3Q53T59 392 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 RNF187Q5TA31 235 aaPredicted RBP8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 SMARCA4P51532 1647 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 TEFQ10587 303 aa8.3□□□□□ -1.08
CNKSR3-205ENST00000607772 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 LUC7LQ9NQ29 371 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 HSPA4P34932 840 aa8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 SAMD1Q6SPF0 538 aaPredicted RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 CBFA2T2O43439 604 aa8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 DHX16O60231 1041 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 RBBP5Q15291 538 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 TNMDQ9H2S6 317 aa8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 ANKRD18AQ8IVF6 992 aa8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 SFPQP23246 707 aaKnown RBP eCLIP8.29□□□□□ -1.082e-7■■□□□ 12.1
CNKSR3-205ENST00000607772 CEBPZQ03701 1054 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 API5Q9BZZ5 524 aaKnown RBP8.29□□□□□ -1.08
CNKSR3-205ENST00000607772 NINLQ9Y2I6 1382 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms