RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	TSPY4	P0CV99	314 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TSPY10	P0CW01	314 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	GTPBP4	Q9BZE4	634 aa	Known RBP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	FANCA	O15360	1455 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	IK	Q13123	557 aa	Predicted RBP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	EFCAB2	Q5VUJ9	269 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	PDCL3	Q9H2J4	239 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NUMA1	Q14980	2115 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NOS1	P29475	1434 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NAT10	Q9H0A0	1025 aa	Known RBP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	DEPDC5	O75140	1603 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SPDYE4	A6NLX3	237 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	KIF3C	O14782	793 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NFXL1	Q6ZNB6	911 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CGNL1	Q0VF96	1302 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TMCO3	Q6UWJ1	677 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MTERF4	Q7Z6M4	381 aa	Known RBP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	DAAM2	Q86T65	1068 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TRERF1	Q96PN7	1200 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	FMNL2	Q96PY5	1086 aa		4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SRRT	Q9BXP5	876 aa	Known RBP	4.87	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CCDC102A	Q96A19	550 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	OLFM4	Q6UX06	510 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	WHAMM	Q8TF30	809 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SPAG9	O60271	1321 aa	Known RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ERICH2	A1L162	156 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NAP1L3	Q99457	506 aa	Predicted RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CARD11	Q9BXL7	1154 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SPATA31E1	Q6ZUB1	1445 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ASXL2	Q76L83	1435 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	PLA2R1	Q13018	1463 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CPLX2	Q6PUV4	134 aa	Known RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ERCC6L2	Q5T890	1561 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MYH10	P35580	1976 aa		4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SRPK2	P78362	688 aa	Known RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ZFP91	Q96JP5	570 aa	Predicted RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	RWDD1	Q9H446	243 aa	Predicted RBP	4.86	□□□□□ -1.63
KCNMA1-223	ENST00000604624	GOLGA6L9	A6NEM1	432 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	KDM4A	O75164	1064 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SEPT8	Q92599	483 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ARL1	P40616	181 aa	Predicted RBP	4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	STK31	Q9BXU1	1019 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CHMP5	Q9NZZ3	219 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SMC2	O95347	1197 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	VPS37C	A5D8V6	355 aa	Predicted RBP	4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MYOM2	P54296	1465 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	RABEP1	Q15276	862 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SMARCE1	Q969G3	411 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	C9orf84	Q5VXU9	1444 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SKOR2	Q2VWA4	1001 aa	Predicted RBP	4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	FAM114A1	Q8IWE2	563 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CLUAP1	Q96AJ1	413 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	HOMER2	Q9NSB8	354 aa		4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MYO18A	Q92614	2054 aa	Known RBP	4.85	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SPC24	Q8NBT2	197 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CFAP74	Q9C0B2	1584 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	NUP133	Q8WUM0	1156 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	PPP1R9B	Q96SB3	815 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TRIM5	Q9C035	493 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	ARID4A	P29374	1257 aa	Predicted RBP	4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TRDN	Q13061	729 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	DDX11	Q96FC9	970 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SMC4	Q9NTJ3	1288 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	SCAPER	Q9BY12	1400 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MROH1	Q8NDA8	1641 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	MRPS9	P82933	396 aa	Known RBP	4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	CDK5RAP3	Q96JB5	506 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	RNF17	Q9BXT8	1623 aa	Known RBP	4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	TRPM2	O94759	1503 aa		4.84	□□□□□ -1.63
KCNMA1-223	ENST00000604624	DES	P17661	470 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ERCC3	P19447	782 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MATR3	P43243	847 aa	Known RBP eCLIP	4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SDF4	Q9BRK5	362 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	GOPC	Q9HD26	462 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CROCC	Q5TZA2	2017 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	BANK1	Q8NDB2	785 aa		4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.84	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MACROD2	A1Z1Q3	448 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PDIA4	P13667	645 aa	Known RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RNF214	Q8ND24	703 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	LETM1	O95202	739 aa	Predicted RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	KRT18	P05783	430 aa	Known RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PSMC4	P43686	418 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	PLCD3	Q8N3E9	789 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	BCL2L13	Q9BXK5	485 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	CFDP1	Q9UEE9	299 aa	Predicted RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	EFCAB6	Q5THR3	1501 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	FRMPD1	Q5SYB0	1578 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ARHGEF40	Q8TER5	1519 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RAB3IL1	Q8TBN0	382 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	ATRX	P46100	2492 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	SAFB	Q15424	915 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	TANGO6	Q9C0B7	1094 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	NASP	P49321	788 aa	Predicted RBP	4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	RRP7BP	Q9NSQ0	103 aa		4.83	□□□□□ -1.64
KCNMA1-223	ENST00000604624	TTC37	Q6PGP7	1564 aa		4.83	□□□□□ -1.64

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