RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 ZNF710Q8N1W2 664 aa15.25■□□□□ 0.03
CDCA3-212ENST00000604599 USP26Q9BXU7 913 aa15.25■□□□□ 0.03
CDCA3-212ENST00000604599 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
CDCA3-212ENST00000604599 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
CDCA3-212ENST00000604599 UTP14CQ5TAP6 766 aaKnown RBP15.24■□□□□ 0.03
CDCA3-212ENST00000604599 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
CDCA3-212ENST00000604599 ZNF830Q96NB3 372 aaPredicted RBP15.24■□□□□ 0.03
CDCA3-212ENST00000604599 PPRC1Q5VV67 1664 aaKnown RBP15.24■□□□□ 0.03
CDCA3-212ENST00000604599 CHGAP10645 457 aaKnown RBP15.24■□□□□ 0.03
CDCA3-212ENST00000604599 QRICH2Q9H0J4 1663 aa15.24■□□□□ 0.03
CDCA3-212ENST00000604599 ST18O60284 1047 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 PLEKHM2Q8IWE5 1019 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 SPAG9O60271 1321 aaKnown RBP15.23■□□□□ 0.03
CDCA3-212ENST00000604599 IL16Q14005 1332 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 AFAP1Q8N556 730 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 TET3O43151 1660 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 USP32Q8NFA0 1604 aa15.23■□□□□ 0.03
CDCA3-212ENST00000604599 C17orf53Q8N3J3 647 aaPredicted RBP15.23■□□□□ 0.03
CDCA3-212ENST00000604599 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
CDCA3-212ENST00000604599 C16orf71Q8IYS4 520 aaPredicted RBP15.22■□□□□ 0.03
CDCA3-212ENST00000604599 GGNBP2Q9H3C7 697 aa15.22■□□□□ 0.03
CDCA3-212ENST00000604599 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
CDCA3-212ENST00000604599 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.03
CDCA3-212ENST00000604599 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
CDCA3-212ENST00000604599 TTC22Q5TAA0 569 aa15.21■□□□□ 0.03
CDCA3-212ENST00000604599 EFCAB2Q5VUJ9 269 aa15.21■□□□□ 0.03
CDCA3-212ENST00000604599 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
CDCA3-212ENST00000604599 MBD3O95983 291 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 KIF3BO15066 747 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 ATP2B3Q16720 1220 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 PPP4R3BQ5MIZ7 849 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 INTS3Q68E01 1043 aaKnown RBP15.2■□□□□ 0.02
CDCA3-212ENST00000604599 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
CDCA3-212ENST00000604599 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 KIF1BO60333 1816 aa15.2■□□□□ 0.02
CDCA3-212ENST00000604599 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
CDCA3-212ENST00000604599 APBB1O00213 710 aa15.19■□□□□ 0.02
CDCA3-212ENST00000604599 TSPYL6Q8N831 410 aa15.19■□□□□ 0.02
CDCA3-212ENST00000604599 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-212ENST00000604599 INO80Q9ULG1 1556 aaPredicted RBP15.19■□□□□ 0.02
CDCA3-212ENST00000604599 THUMPD2Q9BTF0 503 aaKnown RBP15.19■□□□□ 0.02
CDCA3-212ENST00000604599 CHMP4BQ9H444 224 aaKnown RBP15.19■□□□□ 0.02
CDCA3-212ENST00000604599 ANKRD36BQ8N2N9 1353 aa15.19■□□□□ 0.02
CDCA3-212ENST00000604599 ABCC1P33527 1531 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 NOLC1Q14978 699 aaKnown RBP eCLIP15.18■□□□□ 0.02
CDCA3-212ENST00000604599 PRIMPOLQ96LW4 560 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
CDCA3-212ENST00000604599 PIBF1Q8WXW3 757 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 USP25Q9UHP3 1055 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 NSD2O96028 1365 aa15.18■□□□□ 0.02
CDCA3-212ENST00000604599 IFT172Q9UG01 1749 aa15.17■□□□□ 0.02
CDCA3-212ENST00000604599 SAFB2Q14151 953 aaKnown RBP eCLIP15.17■□□□□ 0.02
CDCA3-212ENST00000604599 GDPD2Q9HCC8 539 aa15.17■□□□□ 0.02
CDCA3-212ENST00000604599 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
CDCA3-212ENST00000604599 SPDYE4A6NLX3 237 aa15.17■□□□□ 0.02
CDCA3-212ENST00000604599 HMGN5P82970 282 aaKnown RBP15.17■□□□□ 0.02
CDCA3-212ENST00000604599 TPRNQ4KMQ1 711 aa15.17■□□□□ 0.02
CDCA3-212ENST00000604599 SDSP20132 328 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 NOL8Q76FK4 1167 aaKnown RBP15.16■□□□□ 0.02
CDCA3-212ENST00000604599 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 PLCH2O75038 1416 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 VAMP4O75379 141 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 FGD1P98174 961 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 COL3A1P02461 1466 aaPredicted RBP15.16■□□□□ 0.02
CDCA3-212ENST00000604599 DEPDC5O75140 1603 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 PTCH1Q13635 1447 aa15.16■□□□□ 0.02
CDCA3-212ENST00000604599 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 ABCC4O15439 1325 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 PIK3R4Q99570 1358 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 GTF2F1P35269 517 aaKnown RBP eCLIP15.15■□□□□ 0.02
CDCA3-212ENST00000604599 NEK4P51957 841 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 TMX3Q96JJ7 454 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 CFAP44Q96MT7 982 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 GTPBP4Q9BZE4 634 aaKnown RBP15.15■□□□□ 0.02
CDCA3-212ENST00000604599 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 NRXN1Q9ULB1 1477 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 ZFYVE16Q7Z3T8 1539 aa15.15■□□□□ 0.02
CDCA3-212ENST00000604599 SMARCA5O60264 1052 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-212ENST00000604599 IGSF3O75054 1194 aa15.14■□□□□ 0.01
CDCA3-212ENST00000604599 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-212ENST00000604599 SYAP1Q96A49 352 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-212ENST00000604599 EVC2Q86UK5 1308 aa15.14■□□□□ 0.01
CDCA3-212ENST00000604599 DIAPH1O60610 1272 aaKnown RBP15.14■□□□□ 0.01
CDCA3-212ENST00000604599 GADD45BO75293 160 aaPredicted RBP15.14■□□□□ 0.01
CDCA3-212ENST00000604599 ARHGAP45Q92619 1136 aa15.14■□□□□ 0.01
CDCA3-212ENST00000604599 NEURL4Q96JN8 1562 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 DCTPP1Q9H773 170 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 SETBP1Q9Y6X0 1596 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 BRD1O95696 1058 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 PRKAR2BP31323 418 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 KNDC1Q76NI1 1749 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 REC8O95072 547 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 ADCY5O95622 1261 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
CDCA3-212ENST00000604599 KIF20AO95235 890 aa15.12■□□□□ 0.01
CDCA3-212ENST00000604599 PLCB2Q00722 1185 aa15.12■□□□□ 0.01
CDCA3-212ENST00000604599 PDCL2Q8N4E4 241 aa15.12■□□□□ 0.01
CDCA3-212ENST00000604599 SENP3Q9H4L4 574 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms