RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 PXDNQ92626 1479 aa16.11■□□□□ 0.17
UBE2E3-214ENST00000602970 CENPBP07199 599 aaPredicted RBP16.11■□□□□ 0.17
UBE2E3-214ENST00000602970 HNRNPUQ00839 825 aaKnown RBP eCLIP16.11■□□□□ 0.17
UBE2E3-214ENST00000602970 PEAK1Q9H792 1746 aa16.11■□□□□ 0.17
UBE2E3-214ENST00000602970 LTN1O94822 1766 aa16.1■□□□□ 0.17
UBE2E3-214ENST00000602970 ZNF579Q8NAF0 562 aaKnown RBP16.1■□□□□ 0.17
UBE2E3-214ENST00000602970 NPHP3Q7Z494 1330 aa16.1■□□□□ 0.17
UBE2E3-214ENST00000602970 NLRP6P59044 892 aa16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 XPCQ01831 940 aaPredicted RBP16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 BRINP3Q76B58 766 aa16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 KRT28Q7Z3Y7 464 aa16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 ABTB2Q8N961 1025 aa16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 SLIT3O75094 1523 aa16.09■□□□□ 0.17
UBE2E3-214ENST00000602970 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.17
UBE2E3-214ENST00000602970 CLCN6P51797 869 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 POLKQ9UBT6 870 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 SBNO1A3KN83 1393 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 PNPLA6Q8IY17 1366 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 NFAT5O94916 1531 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.16
UBE2E3-214ENST00000602970 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
UBE2E3-214ENST00000602970 EMILIN1Q9Y6C2 1016 aa16.07■□□□□ 0.16
UBE2E3-214ENST00000602970 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
UBE2E3-214ENST00000602970 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
UBE2E3-214ENST00000602970 FBLN1P23142 703 aa16.06■□□□□ 0.16
UBE2E3-214ENST00000602970 NUTM2GQ5VZR2 741 aa16.06■□□□□ 0.16
UBE2E3-214ENST00000602970 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
UBE2E3-214ENST00000602970 ADAMTS8Q9UP79 889 aa16.05■□□□□ 0.16
UBE2E3-214ENST00000602970 PPM1GO15355 546 aaPredicted RBP16.04■□□□□ 0.16
UBE2E3-214ENST00000602970 SOX12O15370 315 aa16.04■□□□□ 0.16
UBE2E3-214ENST00000602970 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
UBE2E3-214ENST00000602970 ABCA3Q99758 1704 aa16.03■□□□□ 0.16
UBE2E3-214ENST00000602970 USP19O94966 1318 aa16.03■□□□□ 0.16
UBE2E3-214ENST00000602970 ZBED9Q6R2W3 1325 aa16.03■□□□□ 0.16
UBE2E3-214ENST00000602970 AHDC1Q5TGY3 1603 aaPredicted RBP16.03■□□□□ 0.16
UBE2E3-214ENST00000602970 FLT4P35916 1363 aa16.02■□□□□ 0.16
UBE2E3-214ENST00000602970 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.16
UBE2E3-214ENST00000602970 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
UBE2E3-214ENST00000602970 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
UBE2E3-214ENST00000602970 NUDCQ9Y266 331 aa16.02■□□□□ 0.16
UBE2E3-214ENST00000602970 RGPD1P0DJD0 1748 aa16.02■□□□□ 0.15
UBE2E3-214ENST00000602970 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
UBE2E3-214ENST00000602970 ARHGEF10O15013 1369 aa16.01■□□□□ 0.15
UBE2E3-214ENST00000602970 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
UBE2E3-214ENST00000602970 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
UBE2E3-214ENST00000602970 IQSEC2Q5JU85 1478 aa16.01■□□□□ 0.15
UBE2E3-214ENST00000602970 SOS2Q07890 1332 aaPredicted RBP16■□□□□ 0.15
UBE2E3-214ENST00000602970 SPATA31A3Q5VYP0 1347 aa16■□□□□ 0.15
UBE2E3-214ENST00000602970 KCNH5Q8NCM2 988 aa16■□□□□ 0.15
UBE2E3-214ENST00000602970 U2SURPO15042 1029 aaKnown RBP15.99■□□□□ 0.15
UBE2E3-214ENST00000602970 U2AF1L5P0DN76 240 aaPredicted RBP15.98■□□□□ 0.15
UBE2E3-214ENST00000602970 U2AF1Q01081 240 aaKnown RBP eCLIP15.98■□□□□ 0.15
UBE2E3-214ENST00000602970 PHLPP1O60346 1717 aa15.97■□□□□ 0.15
UBE2E3-214ENST00000602970 AMPHP49418 695 aa15.97■□□□□ 0.15
UBE2E3-214ENST00000602970 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
UBE2E3-214ENST00000602970 IL13P35225 146 aa15.96■□□□□ 0.15
UBE2E3-214ENST00000602970 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 ABCC6O95255 1503 aa15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 SENP3-EIF4A1A0A087X0R7 540 aa15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 GCP02774 474 aa15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 EIF4A2Q14240 407 aaKnown RBP15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 DCBLD2Q96PD2 775 aa15.95■□□□□ 0.14
UBE2E3-214ENST00000602970 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 HOXC9P31274 260 aa15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 RUNDC1Q96C34 613 aa15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 PHF12Q96QT6 1004 aa15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 COL22A1Q8NFW1 1626 aaPredicted RBP15.94■□□□□ 0.14
UBE2E3-214ENST00000602970 COL18A1P39060 1754 aa15.93■□□□□ 0.14
UBE2E3-214ENST00000602970 GALR2O43603 387 aaPredicted RBP15.93■□□□□ 0.14
UBE2E3-214ENST00000602970 TOM1O60784 492 aa15.92■□□□□ 0.14
UBE2E3-214ENST00000602970 LHX8Q68G74 356 aa15.92■□□□□ 0.14
UBE2E3-214ENST00000602970 RGPD2P0DJD1 1756 aa15.92■□□□□ 0.14
UBE2E3-214ENST00000602970 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
UBE2E3-214ENST00000602970 CAMTA1Q9Y6Y1 1673 aa15.92■□□□□ 0.14
UBE2E3-214ENST00000602970 ZBTB7CA1YPR0 619 aa15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 APAF1O14727 1248 aa15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 ARHGEF25Q86VW2 580 aa15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 IP6K1Q92551 441 aa15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 PNNQ9H307 717 aaKnown RBP15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 MAPK8IP3Q9UPT6 1336 aa15.91■□□□□ 0.14
UBE2E3-214ENST00000602970 FCHSD2O94868 740 aa15.9■□□□□ 0.14
UBE2E3-214ENST00000602970 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
UBE2E3-214ENST00000602970 RSPH6AQ9H0K4 717 aa15.9■□□□□ 0.14
UBE2E3-214ENST00000602970 SALL2Q9Y467 1007 aaPredicted RBP15.9■□□□□ 0.14
UBE2E3-214ENST00000602970 CABLES1Q8TDN4 633 aa15.89■□□□□ 0.13
UBE2E3-214ENST00000602970 PLEKHF1Q96S99 279 aa15.89■□□□□ 0.13
UBE2E3-214ENST00000602970 DLG5Q8TDM6 1919 aa15.89■□□□□ 0.13
UBE2E3-214ENST00000602970 CPDO75976 1380 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 HMOX1P09601 288 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 PRKAR2BP31323 418 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 TCP11L2Q8N4U5 519 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 LMO7Q8WWI1 1683 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 IGSF1Q8N6C5 1336 aa15.88■□□□□ 0.13
UBE2E3-214ENST00000602970 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
UBE2E3-214ENST00000602970 NEFMP07197 916 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms