RNA–Protein interactions for RNA: ENST00000602272.5

FARP1-241, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-241ENST00000602272 FYCO1Q9BQS8 1478 aa10.88□□□□□ -0.67
FARP1-241ENST00000602272 WDR7Q9Y4E6 1490 aa10.88□□□□□ -0.67
FARP1-241ENST00000602272 SMPD1P17405 629 aa10.88□□□□□ -0.67
FARP1-241ENST00000602272 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
FARP1-241ENST00000602272 GLI2P10070 1586 aa10.87□□□□□ -0.67
FARP1-241ENST00000602272 C6orf229H3BNL8 230 aa10.87□□□□□ -0.67
FARP1-241ENST00000602272 RC3H1Q5TC82 1133 aaKnown RBP10.87□□□□□ -0.67
FARP1-241ENST00000602272 SPIRE2Q8WWL2 714 aa10.87□□□□□ -0.67
FARP1-241ENST00000602272 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
FARP1-241ENST00000602272 TBC1D2Q9BYX2 928 aa10.87□□□□□ -0.67
FARP1-241ENST00000602272 EPRSP07814 1512 aaKnown RBP10.87□□□□□ -0.67
FARP1-241ENST00000602272 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
FARP1-241ENST00000602272 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
FARP1-241ENST00000602272 SYMPKQ92797 1274 aaKnown RBP10.86□□□□□ -0.67
FARP1-241ENST00000602272 C11orf95C9JLR9 678 aaPredicted RBP10.85□□□□□ -0.67
FARP1-241ENST00000602272 DIXDC1Q155Q3 683 aa10.85□□□□□ -0.67
FARP1-241ENST00000602272 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
FARP1-241ENST00000602272 MAP3K4Q9Y6R4 1608 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 SPDYE5A6NIY4 337 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 SH3D19Q5HYK7 790 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 MYSM1Q5VVJ2 828 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 GOPCQ9HD26 462 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 DACH1Q9UI36 760 aa10.84□□□□□ -0.67
FARP1-241ENST00000602272 RSPH6AQ9H0K4 717 aa10.83□□□□□ -0.68
FARP1-241ENST00000602272 GMPR2Q9P2T1 348 aaKnown RBP10.83□□□□□ -0.68
FARP1-241ENST00000602272 PCDHGC3Q9UN70 934 aa10.83□□□□□ -0.68
FARP1-241ENST00000602272 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 J3QL48 77 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 CCNYL3P0C7X3 344 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 SKOR1P84550 965 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 VPS8Q8N3P4 1428 aa10.82□□□□□ -0.68
FARP1-241ENST00000602272 ABCA9Q8IUA7 1624 aa10.81□□□□□ -0.68
FARP1-241ENST00000602272 GJA5P36382 358 aa10.81□□□□□ -0.68
FARP1-241ENST00000602272 PTPRNQ16849 979 aa10.81□□□□□ -0.68
FARP1-241ENST00000602272 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
FARP1-241ENST00000602272 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
FARP1-241ENST00000602272 PPRC1Q5VV67 1664 aaKnown RBP10.81□□□□□ -0.68
FARP1-241ENST00000602272 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
FARP1-241ENST00000602272 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
FARP1-241ENST00000602272 TSPOAP1O95153 1857 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 MOXD2PA6NHM9 499 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 MTMR2Q13614 643 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 EHBP1Q8NDI1 1231 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 ATP13A2Q9NQ11 1180 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 POLR3EQ9NVU0 708 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
FARP1-241ENST00000602272 KIF14Q15058 1648 aa10.78□□□□□ -0.68
FARP1-241ENST00000602272 PLEKHD1A6NEE1 506 aa10.78□□□□□ -0.68
FARP1-241ENST00000602272 NDUFV2P19404 249 aa10.78□□□□□ -0.68
FARP1-241ENST00000602272 PTCRAQ6ISU1 281 aaPredicted RBP10.78□□□□□ -0.68
FARP1-241ENST00000602272 EVA1BQ9NVM1 165 aa10.78□□□□□ -0.68
FARP1-241ENST00000602272 TROQ12816 1431 aaPredicted RBP10.77□□□□□ -0.68
FARP1-241ENST00000602272 SPTLC1O15269 473 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 CLK2P49760 499 aaKnown RBP10.77□□□□□ -0.69
FARP1-241ENST00000602272 RSBN1LQ6PCB5 846 aaPredicted RBP10.77□□□□□ -0.69
FARP1-241ENST00000602272 RIC3Q7Z5B4 369 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 HPS1Q92902 700 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 KIFC2Q96AC6 838 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 LIMD1Q9UGP4 676 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.77□□□□□ -0.69
FARP1-241ENST00000602272 TIAM1Q13009 1591 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 TTC37Q6PGP7 1564 aa10.77□□□□□ -0.69
FARP1-241ENST00000602272 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
FARP1-241ENST00000602272 PCMTD1Q96MG8 357 aaPredicted RBP10.76□□□□□ -0.69
FARP1-241ENST00000602272 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
FARP1-241ENST00000602272 KCNH2Q12809 1159 aa10.75□□□□□ -0.69
FARP1-241ENST00000602272 CD109Q6YHK3 1445 aa10.75□□□□□ -0.69
FARP1-241ENST00000602272 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 EHBP1L1Q8N3D4 1523 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 SIAH2O43255 324 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 TRIM47Q96LD4 638 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
FARP1-241ENST00000602272 UNC93B1Q9H1C4 597 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 WASF2Q9Y6W5 498 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 MAP3K1Q13233 1512 aa10.74□□□□□ -0.69
FARP1-241ENST00000602272 MYO5CQ9NQX4 1742 aa10.73□□□□□ -0.69
FARP1-241ENST00000602272 WFS1O76024 890 aa10.73□□□□□ -0.69
FARP1-241ENST00000602272 SH3BP2P78314 561 aa10.73□□□□□ -0.69
FARP1-241ENST00000602272 TUSC1Q2TAM9 212 aa10.73□□□□□ -0.69
FARP1-241ENST00000602272 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
FARP1-241ENST00000602272 PCDHB15Q9Y5E8 787 aa10.72□□□□□ -0.69
FARP1-241ENST00000602272 KDM6BO15054 1643 aa10.72□□□□□ -0.69
FARP1-241ENST00000602272 CFAP74Q9C0B2 1584 aa10.71□□□□□ -0.69
FARP1-241ENST00000602272 PREX2Q70Z35 1606 aa10.7□□□□□ -0.7
FARP1-241ENST00000602272 ARAP3Q8WWN8 1544 aa10.7□□□□□ -0.7
FARP1-241ENST00000602272 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
FARP1-241ENST00000602272 VARSP26640 1264 aaKnown RBP10.7□□□□□ -0.7
FARP1-241ENST00000602272 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
FARP1-241ENST00000602272 FBXO31Q5XUX0 539 aaPredicted RBP10.7□□□□□ -0.7
FARP1-241ENST00000602272 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
FARP1-241ENST00000602272 PRPF38BQ5VTL8 546 aaKnown RBP10.69□□□□□ -0.7
FARP1-241ENST00000602272 MPNDQ8N594 471 aa10.69□□□□□ -0.7
FARP1-241ENST00000602272 BAP1Q92560 729 aa10.69□□□□□ -0.7
FARP1-241ENST00000602272 ZBTB3Q9H5J0 574 aa10.69□□□□□ -0.7
FARP1-241ENST00000602272 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
FARP1-241ENST00000602272 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms