RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
SNRNP70-208ENST00000599687 PROSER2Q86WR7 435 aaPredicted RBP12.96□□□□□ -0.33
SNRNP70-208ENST00000599687 TMEM94Q12767 1356 aa12.95□□□□□ -0.34
SNRNP70-208ENST00000599687 KIF1BO60333 1816 aa12.95□□□□□ -0.34
SNRNP70-208ENST00000599687 ARID3AQ99856 593 aa12.95□□□□□ -0.34
SNRNP70-208ENST00000599687 NKTRP30414 1462 aaKnown RBP12.94□□□□□ -0.34
SNRNP70-208ENST00000599687 HSPA1LP34931 641 aa12.94□□□□□ -0.34
SNRNP70-208ENST00000599687 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
SNRNP70-208ENST00000599687 MPHOSPH9Q99550 1183 aa12.94□□□□□ -0.34
SNRNP70-208ENST00000599687 C1orf115Q9H7X2 142 aa12.93□□□□□ -0.34
SNRNP70-208ENST00000599687 SETD5Q9C0A6 1442 aa12.93□□□□□ -0.34
SNRNP70-208ENST00000599687 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
SNRNP70-208ENST00000599687 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
SNRNP70-208ENST00000599687 PIK3R4Q99570 1358 aa12.92□□□□□ -0.34
SNRNP70-208ENST00000599687 NRXN3Q9Y4C0 1643 aa12.91□□□□□ -0.34
SNRNP70-208ENST00000599687 ACIN1Q9UKV3 1341 aaKnown RBP12.91□□□□□ -0.34
SNRNP70-208ENST00000599687 SETBP1Q9Y6X0 1596 aa12.9□□□□□ -0.34
SNRNP70-208ENST00000599687 HRCP23327 699 aa12.9□□□□□ -0.34
SNRNP70-208ENST00000599687 KCTD12Q96CX2 325 aaKnown RBP12.9□□□□□ -0.34
SNRNP70-208ENST00000599687 PTPRUQ92729 1446 aa12.89□□□□□ -0.35
SNRNP70-208ENST00000599687 RGS20O76081 388 aa12.89□□□□□ -0.35
SNRNP70-208ENST00000599687 FAM117AQ9C073 453 aa12.89□□□□□ -0.35
SNRNP70-208ENST00000599687 AMOTL2Q9Y2J4 779 aa12.89□□□□□ -0.35
SNRNP70-208ENST00000599687 RPGRIP1LQ68CZ1 1315 aa12.88□□□□□ -0.35
SNRNP70-208ENST00000599687 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
SNRNP70-208ENST00000599687 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
SNRNP70-208ENST00000599687 METP08581 1390 aa12.87□□□□□ -0.35
SNRNP70-208ENST00000599687 MSH6P52701 1360 aa12.87□□□□□ -0.35
SNRNP70-208ENST00000599687 DISP3Q9P2K9 1392 aa12.87□□□□□ -0.35
SNRNP70-208ENST00000599687 FAM135BQ49AJ0 1406 aa12.87□□□□□ -0.35
SNRNP70-208ENST00000599687 HRO43593 1189 aa12.86□□□□□ -0.35
SNRNP70-208ENST00000599687 PPLO60437 1756 aa12.86□□□□□ -0.35
SNRNP70-208ENST00000599687 CCDC144AA2RUR9 1427 aa12.86□□□□□ -0.35
SNRNP70-208ENST00000599687 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
SNRNP70-208ENST00000599687 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
SNRNP70-208ENST00000599687 GPR37O15354 613 aa12.84□□□□□ -0.35
SNRNP70-208ENST00000599687 PPP1R15BQ5SWA1 713 aa12.84□□□□□ -0.35
SNRNP70-208ENST00000599687 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
SNRNP70-208ENST00000599687 SLAIN2Q9P270 581 aa12.84□□□□□ -0.35
SNRNP70-208ENST00000599687 SPATA31E1Q6ZUB1 1445 aa12.84□□□□□ -0.35
SNRNP70-208ENST00000599687 DPYSL4O14531 572 aa12.83□□□□□ -0.36
SNRNP70-208ENST00000599687 RGL3Q3MIN7 710 aa12.83□□□□□ -0.36
SNRNP70-208ENST00000599687 IRX2Q9BZI1 471 aaPredicted RBP12.83□□□□□ -0.36
SNRNP70-208ENST00000599687 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.36
SNRNP70-208ENST00000599687 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
SNRNP70-208ENST00000599687 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
SNRNP70-208ENST00000599687 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
SNRNP70-208ENST00000599687 PSEN2P49810 448 aa12.82□□□□□ -0.36
SNRNP70-208ENST00000599687 DMRTA1Q5VZB9 504 aa12.82□□□□□ -0.36
SNRNP70-208ENST00000599687 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
SNRNP70-208ENST00000599687 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
SNRNP70-208ENST00000599687 ILDR2Q71H61 639 aa12.8□□□□□ -0.36
SNRNP70-208ENST00000599687 EMILIN3Q9NT22 766 aa12.8□□□□□ -0.36
SNRNP70-208ENST00000599687 MED1Q15648 1581 aaPredicted RBP12.79□□□□□ -0.36
SNRNP70-208ENST00000599687 ATF3P18847 181 aa12.79□□□□□ -0.36
SNRNP70-208ENST00000599687 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
SNRNP70-208ENST00000599687 PDIA6Q15084 440 aa12.78□□□□□ -0.36
SNRNP70-208ENST00000599687 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
SNRNP70-208ENST00000599687 APBB1O00213 710 aa12.77□□□□□ -0.37
SNRNP70-208ENST00000599687 TBC1D12O60347 775 aa12.77□□□□□ -0.37
SNRNP70-208ENST00000599687 DCCP43146 1447 aa12.77□□□□□ -0.37
SNRNP70-208ENST00000599687 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
SNRNP70-208ENST00000599687 PTPN5P54829 565 aa12.76□□□□□ -0.37
SNRNP70-208ENST00000599687 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
SNRNP70-208ENST00000599687 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
SNRNP70-208ENST00000599687 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
SNRNP70-208ENST00000599687 PRAG1Q86YV5 1406 aa12.75□□□□□ -0.37
SNRNP70-208ENST00000599687 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
SNRNP70-208ENST00000599687 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
SNRNP70-208ENST00000599687 ROBO2Q9HCK4 1378 aa12.75□□□□□ -0.37
SNRNP70-208ENST00000599687 PIK3C2GO75747 1445 aa12.74□□□□□ -0.37
SNRNP70-208ENST00000599687 PTCH1Q13635 1447 aa12.74□□□□□ -0.37
SNRNP70-208ENST00000599687 CCDC102AQ96A19 550 aa12.74□□□□□ -0.37
SNRNP70-208ENST00000599687 KCNK17Q96T54 332 aa12.74□□□□□ -0.37
SNRNP70-208ENST00000599687 MST1RQ04912 1400 aa12.73□□□□□ -0.37
SNRNP70-208ENST00000599687 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
SNRNP70-208ENST00000599687 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
SNRNP70-208ENST00000599687 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
SNRNP70-208ENST00000599687 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
SNRNP70-208ENST00000599687 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
SNRNP70-208ENST00000599687 COL16A1Q07092 1604 aaPredicted RBP12.72□□□□□ -0.37
SNRNP70-208ENST00000599687 NRXN1Q9ULB1 1477 aa12.72□□□□□ -0.37
SNRNP70-208ENST00000599687 AHDC1Q5TGY3 1603 aaPredicted RBP12.71□□□□□ -0.37
SNRNP70-208ENST00000599687 PARP9Q8IXQ6 854 aa12.71□□□□□ -0.37
SNRNP70-208ENST00000599687 STK26Q9P289 416 aa12.71□□□□□ -0.37
SNRNP70-208ENST00000599687 ASXL1Q8IXJ9 1541 aa12.71□□□□□ -0.38
SNRNP70-208ENST00000599687 MYOM2P54296 1465 aa12.71□□□□□ -0.38
SNRNP70-208ENST00000599687 LRPPRCP42704 1394 aaKnown RBP12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 ABCC11Q96J66 1382 aa12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 FLIIQ13045 1269 aa12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 DSG2Q14126 1118 aa12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 CFAP70Q5T0N1 1121 aa12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 NPM2Q86SE8 214 aaKnown RBP12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 TECPR2O15040 1411 aa12.7□□□□□ -0.38
SNRNP70-208ENST00000599687 JCADQ9P266 1359 aa12.69□□□□□ -0.38
SNRNP70-208ENST00000599687 MAP2K5Q13163 448 aa12.69□□□□□ -0.38
SNRNP70-208ENST00000599687 AMHR2Q16671 573 aa12.69□□□□□ -0.38
SNRNP70-208ENST00000599687 C1orf167Q5SNV9 1468 aa12.68□□□□□ -0.38
SNRNP70-208ENST00000599687 GOLGA8CPA6NN73 597 aa12.68□□□□□ -0.38
SNRNP70-208ENST00000599687 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms