RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 SOX12O15370 315 aa29.85■■■□□ 2.37
TMC6-213ENST00000589933 CSB-PGBD3P0DP91 1061 aa29.85■■■□□ 2.37
TMC6-213ENST00000589933 DDB1Q16531 1140 aa29.85■■■□□ 2.37
TMC6-213ENST00000589933 ARHGEF25Q86VW2 580 aa29.85■■■□□ 2.37
TMC6-213ENST00000589933 R3HDM1Q15032 1099 aaKnown RBP29.84■■■□□ 2.37
TMC6-213ENST00000589933 HDGFL2Q7Z4V5 671 aaPredicted RBP29.84■■■□□ 2.37
TMC6-213ENST00000589933 TMC1Q8TDI8 760 aa29.84■■■□□ 2.37
TMC6-213ENST00000589933 OVOS2A0A0G2JMS6 1433 aa29.83■■■□□ 2.37
TMC6-213ENST00000589933 OVOS2A0A0J9YW53 1432 aa29.83■■■□□ 2.37
TMC6-213ENST00000589933 OVOS2Q6IE36 1432 aa29.83■■■□□ 2.37
TMC6-213ENST00000589933 NBPF14Q5TI25 921 aa29.82■■■□□ 2.36
TMC6-213ENST00000589933 WNK3Q9BYP7 1800 aa29.82■■■□□ 2.36
TMC6-213ENST00000589933 SLC24A1O60721 1099 aa29.8■■■□□ 2.36
TMC6-213ENST00000589933 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.8■■■□□ 2.36
TMC6-213ENST00000589933 AXIN2Q9Y2T1 843 aa29.8■■■□□ 2.36
TMC6-213ENST00000589933 LRRC37A3O60309 1634 aa29.79■■■□□ 2.36
TMC6-213ENST00000589933 TERF2IPQ9NYB0 399 aa29.79■■■□□ 2.36
TMC6-213ENST00000589933 RREB1Q92766 1687 aa29.79■■■□□ 2.36
TMC6-213ENST00000589933 ABCC6O95255 1503 aa29.78■■■□□ 2.36
TMC6-213ENST00000589933 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
TMC6-213ENST00000589933 PUS7Q96PZ0 661 aaKnown RBP29.77■■■□□ 2.36
TMC6-213ENST00000589933 CARD10Q9BWT7 1032 aa29.77■■■□□ 2.36
TMC6-213ENST00000589933 USP31Q70CQ4 1352 aa29.76■■■□□ 2.35
TMC6-213ENST00000589933 NFAT5O94916 1531 aa29.76■■■□□ 2.35
TMC6-213ENST00000589933 USP54Q70EL1 1684 aa29.75■■■□□ 2.35
TMC6-213ENST00000589933 NUP188Q5SRE5 1749 aa29.74■■■□□ 2.35
TMC6-213ENST00000589933 TRIM26Q12899 539 aaPredicted RBP29.74■■■□□ 2.35
TMC6-213ENST00000589933 CCDC7Q96M83 1385 aa29.74■■■□□ 2.35
TMC6-213ENST00000589933 PEAK1Q9H792 1746 aa29.74■■■□□ 2.35
TMC6-213ENST00000589933 LTN1O94822 1766 aa29.73■■■□□ 2.35
TMC6-213ENST00000589933 SLC12A5Q9H2X9 1139 aa29.73■■■□□ 2.35
TMC6-213ENST00000589933 EDC4Q6P2E9 1401 aaKnown RBP29.72■■■□□ 2.35
TMC6-213ENST00000589933 NME9Q86XW9 330 aa29.71■■■□□ 2.35
TMC6-213ENST00000589933 RGPD3A6NKT7 1758 aaPredicted RBP29.71■■■□□ 2.35
TMC6-213ENST00000589933 RGPD4Q7Z3J3 1758 aa29.71■■■□□ 2.35
TMC6-213ENST00000589933 EXOC5O00471 708 aa29.7■■■□□ 2.35
TMC6-213ENST00000589933 CD163L1Q9NR16 1453 aa29.69■■■□□ 2.34
TMC6-213ENST00000589933 NINLQ9Y2I6 1382 aa29.69■■■□□ 2.34
TMC6-213ENST00000589933 BCL11BQ9C0K0 894 aaPredicted RBP29.68■■■□□ 2.34
TMC6-213ENST00000589933 PLSCR1O15162 318 aa29.67■■■□□ 2.34
TMC6-213ENST00000589933 MARCH10Q8NA82 808 aaPredicted RBP29.65■■■□□ 2.34
TMC6-213ENST00000589933 A0A1W2PP64 1363 aa29.64■■■□□ 2.34
TMC6-213ENST00000589933 BCL9O00512 1426 aa29.64■■■□□ 2.34
TMC6-213ENST00000589933 ST20-MTHFSA0A0A6YYL1 179 aa29.64■■■□□ 2.34
TMC6-213ENST00000589933 NLRP2Q9NX02 1062 aa29.64■■■□□ 2.34
TMC6-213ENST00000589933 KAT6BQ8WYB5 2073 aa29.63■■■□□ 2.33
TMC6-213ENST00000589933 ERBB3P21860 1342 aa29.62■■■□□ 2.33
TMC6-213ENST00000589933 TNS2Q63HR2 1409 aa29.59■■■□□ 2.33
TMC6-213ENST00000589933 ANKRD24Q8TF21 1146 aa29.58■■■□□ 2.33
TMC6-213ENST00000589933 TESK2Q96S53 571 aa29.58■■■□□ 2.33
TMC6-213ENST00000589933 IL2RBP14784 551 aa29.57■■■□□ 2.32
TMC6-213ENST00000589933 COG3Q96JB2 828 aa29.57■■■□□ 2.32
TMC6-213ENST00000589933 TMF1P82094 1093 aa29.55■■■□□ 2.32
TMC6-213ENST00000589933 SPON1Q9HCB6 807 aa29.55■■■□□ 2.32
TMC6-213ENST00000589933 FAM208AQ9UK61 1670 aaKnown RBP29.54■■■□□ 2.32
TMC6-213ENST00000589933 PPP1R1BQ9UD71 204 aaPredicted RBP29.54■■■□□ 2.32
TMC6-213ENST00000589933 CDCA8Q53HL2 280 aa29.52■■■□□ 2.32
TMC6-213ENST00000589933 IP6K1Q92551 441 aa29.52■■■□□ 2.32
TMC6-213ENST00000589933 KCNQ2O43526 872 aa29.51■■■□□ 2.31
TMC6-213ENST00000589933 PTF1AQ7RTS3 328 aa29.5■■■□□ 2.31
TMC6-213ENST00000589933 ANKRD36BQ8N2N9 1353 aa29.5■■■□□ 2.31
TMC6-213ENST00000589933 AMPHP49418 695 aa29.49■■■□□ 2.31
TMC6-213ENST00000589933 NHSQ6T4R5 1651 aa29.49■■■□□ 2.31
TMC6-213ENST00000589933 USP47Q96K76 1375 aa29.49■■■□□ 2.31
TMC6-213ENST00000589933 TXNRD1Q16881 649 aa29.47■■■□□ 2.31
TMC6-213ENST00000589933 LTV1Q96GA3 475 aaPredicted RBP29.47■■■□□ 2.31
TMC6-213ENST00000589933 STK32BQ9NY57 414 aa29.47■■■□□ 2.31
TMC6-213ENST00000589933 DCAF8L1A6NGE4 600 aa29.45■■■□□ 2.31
TMC6-213ENST00000589933 ACSBG1Q96GR2 724 aa29.44■■■□□ 2.3
TMC6-213ENST00000589933 PROM2Q8N271 834 aa29.43■■■□□ 2.3
TMC6-213ENST00000589933 TIMELESSQ9UNS1 1208 aa29.43■■■□□ 2.3
TMC6-213ENST00000589933 ANO8Q9HCE9 1232 aaPredicted RBP29.42■■■□□ 2.3
TMC6-213ENST00000589933 MAP3K19Q56UN5 1328 aa29.42■■■□□ 2.3
TMC6-213ENST00000589933 HOXC9P31274 260 aa29.41■■■□□ 2.3
TMC6-213ENST00000589933 BTAF1O14981 1849 aa29.41■■■□□ 2.3
TMC6-213ENST00000589933 CASZ1Q86V15 1759 aa29.39■■■□□ 2.3
TMC6-213ENST00000589933 RTL1A6NKG5 1358 aa29.39■■■□□ 2.29
TMC6-213ENST00000589933 SLC15A2Q16348 729 aa29.38■■■□□ 2.29
TMC6-213ENST00000589933 DDX54Q8TDD1 881 aaKnown RBP29.38■■■□□ 2.29
TMC6-213ENST00000589933 KIF20BQ96Q89 1820 aa29.38■■■□□ 2.29
TMC6-213ENST00000589933 CLSPNQ9HAW4 1339 aa29.36■■■□□ 2.29
TMC6-213ENST00000589933 RGPD2P0DJD1 1756 aa29.36■■■□□ 2.29
TMC6-213ENST00000589933 SMG6Q86US8 1419 aaKnown RBP29.36■■■□□ 2.29
TMC6-213ENST00000589933 FYB1O15117 783 aa29.35■■■□□ 2.29
TMC6-213ENST00000589933 GGNBP2Q9H3C7 697 aa29.35■■■□□ 2.29
TMC6-213ENST00000589933 ZBTB7AO95365 584 aa29.31■■■□□ 2.28
TMC6-213ENST00000589933 FBLN1P23142 703 aa29.31■■■□□ 2.28
TMC6-213ENST00000589933 RRS1Q15050 365 aaKnown RBP29.31■■■□□ 2.28
TMC6-213ENST00000589933 ZCRB1Q8TBF4 217 aaKnown RBP29.3■■■□□ 2.28
TMC6-213ENST00000589933 PCGF6Q9BYE7 350 aa29.3■■■□□ 2.28
TMC6-213ENST00000589933 CGNL1Q0VF96 1302 aa29.28■■■□□ 2.28
TMC6-213ENST00000589933 SYTL4Q96C24 671 aaPredicted RBP29.28■■■□□ 2.28
TMC6-213ENST00000589933 RAPGEF4Q8WZA2 1011 aa29.27■■■□□ 2.28
TMC6-213ENST00000589933 MTFR1LQ9H019 292 aa29.27■■■□□ 2.28
TMC6-213ENST00000589933 SLC27A3Q5K4L6 730 aa29.26■■■□□ 2.27
TMC6-213ENST00000589933 PDGFDQ9GZP0 370 aaPredicted RBP29.26■■■□□ 2.27
TMC6-213ENST00000589933 ATF5Q9Y2D1 282 aaPredicted RBP29.26■■■□□ 2.27
TMC6-213ENST00000589933 KIF24Q5T7B8 1368 aa29.26■■■□□ 2.27
TMC6-213ENST00000589933 DOT1LQ8TEK3 1739 aa29.25■■■□□ 2.27
TMC6-213ENST00000589933 FLT4P35916 1363 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms