RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TLL2Q9Y6L7 1015 aa9.19□□□□□ -0.94
SMAD4-203ENST00000585448 TTC24A2A3L6 582 aaPredicted RBP9.18□□□□□ -0.94
SMAD4-203ENST00000585448 DGAT1O75907 488 aa9.18□□□□□ -0.94
SMAD4-203ENST00000585448 AVPP01185 164 aa9.18□□□□□ -0.94
SMAD4-203ENST00000585448 SEPT12Q8IYM1 358 aa9.18□□□□□ -0.94
SMAD4-203ENST00000585448 ESPNB1AK53 854 aa9.17□□□□□ -0.94
SMAD4-203ENST00000585448 SMPD1P17405 629 aa9.17□□□□□ -0.94
SMAD4-203ENST00000585448 GRM5P41594 1212 aa9.17□□□□□ -0.94
SMAD4-203ENST00000585448 DZIP3Q86Y13 1208 aaKnown RBP9.17□□□□□ -0.94
SMAD4-203ENST00000585448 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
SMAD4-203ENST00000585448 VASH1Q7L8A9 365 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-203ENST00000585448 J3QL48 77 aa9.15□□□□□ -0.94
SMAD4-203ENST00000585448 EIF5BO60841 1220 aaKnown RBP9.15□□□□□ -0.94
SMAD4-203ENST00000585448 VAC14Q08AM6 782 aa9.15□□□□□ -0.94
SMAD4-203ENST00000585448 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
SMAD4-203ENST00000585448 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-203ENST00000585448 ZMYND15Q9H091 742 aa9.15□□□□□ -0.94
SMAD4-203ENST00000585448 SMCPP49901 116 aaPredicted RBP9.14□□□□□ -0.95
SMAD4-203ENST00000585448 ALG2Q9H553 416 aa9.14□□□□□ -0.95
SMAD4-203ENST00000585448 WASF2Q9Y6W5 498 aa9.14□□□□□ -0.95
SMAD4-203ENST00000585448 DHX9Q08211 1270 aaKnown RBP9.13□□□□□ -0.95
SMAD4-203ENST00000585448 NNTQ13423 1086 aa9.13□□□□□ -0.95
SMAD4-203ENST00000585448 NEUROD1Q13562 356 aa9.13□□□□□ -0.95
SMAD4-203ENST00000585448 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
SMAD4-203ENST00000585448 TRIM52Q96A61 297 aa9.13□□□□□ -0.95
SMAD4-203ENST00000585448 PCDHB9Q9Y5E1 797 aa9.13□□□□□ -0.95
SMAD4-203ENST00000585448 TRAK2O60296 914 aa9.12□□□□□ -0.95
SMAD4-203ENST00000585448 FSHRP23945 695 aa9.12□□□□□ -0.95
SMAD4-203ENST00000585448 RNF20Q5VTR2 975 aa9.12□□□□□ -0.95
SMAD4-203ENST00000585448 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-203ENST00000585448 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
SMAD4-203ENST00000585448 PKDCCQ504Y2 493 aa9.11□□□□□ -0.95
SMAD4-203ENST00000585448 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
SMAD4-203ENST00000585448 CCDC116Q8IYX3 515 aa9.11□□□□□ -0.95
SMAD4-203ENST00000585448 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
SMAD4-203ENST00000585448 NR3C2P08235 984 aa9.1□□□□□ -0.95
SMAD4-203ENST00000585448 SEMA3FQ13275 785 aa9.1□□□□□ -0.95
SMAD4-203ENST00000585448 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
SMAD4-203ENST00000585448 CHIC2Q9UKJ5 165 aa9.1□□□□□ -0.95
SMAD4-203ENST00000585448 EMILIN1Q9Y6C2 1016 aa9.1□□□□□ -0.95
SMAD4-203ENST00000585448 PHTF2Q8N3S3 785 aa9.09□□□□□ -0.95
SMAD4-203ENST00000585448 GIGYF1O75420 1035 aaPredicted RBP9.08□□□□□ -0.96
SMAD4-203ENST00000585448 NFATC2IPQ8NCF5 419 aa9.08□□□□□ -0.96
SMAD4-203ENST00000585448 HPS1Q92902 700 aa9.08□□□□□ -0.96
SMAD4-203ENST00000585448 POM121CA8CG34 1229 aa9.07□□□□□ -0.96
SMAD4-203ENST00000585448 C14orf37Q86TY3 774 aa9.07□□□□□ -0.96
SMAD4-203ENST00000585448 ADAMTS19Q8TE59 1207 aa9.07□□□□□ -0.96
SMAD4-203ENST00000585448 TIMP2P16035 220 aa9.06□□□□□ -0.96
SMAD4-203ENST00000585448 PPP1R26Q5T8A7 1209 aaPredicted RBP9.06□□□□□ -0.96
SMAD4-203ENST00000585448 PGPEP1Q9NXJ5 209 aa9.06□□□□□ -0.96
SMAD4-203ENST00000585448 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
SMAD4-203ENST00000585448 MAP7D1Q3KQU3 841 aa9.04□□□□□ -0.96
SMAD4-203ENST00000585448 Q6ZNB5 142 aa9.04□□□□□ -0.96
SMAD4-203ENST00000585448 UBE2Q2Q8WVN8 375 aa9.04□□□□□ -0.96
SMAD4-203ENST00000585448 GLMNQ92990 594 aa9.04□□□□□ -0.96
SMAD4-203ENST00000585448 CCDC180Q9P1Z9 1646 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 LZTS3O60299 673 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-203ENST00000585448 WDR4P57081 412 aaKnown RBP9.03□□□□□ -0.96
SMAD4-203ENST00000585448 SLFNL1Q499Z3 407 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 HDGFL1Q5TGJ6 251 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 Q6ZVU0 165 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 ITPKCQ96DU7 683 aa9.03□□□□□ -0.96
SMAD4-203ENST00000585448 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
SMAD4-203ENST00000585448 AAASQ9NRG9 546 aa9.02□□□□□ -0.97
SMAD4-203ENST00000585448 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.97
SMAD4-203ENST00000585448 LCE2BO14633 110 aa9.01□□□□□ -0.97
SMAD4-203ENST00000585448 AXIN1O15169 862 aa9.01□□□□□ -0.97
SMAD4-203ENST00000585448 CAPN5O15484 640 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-203ENST00000585448 ZIC2O95409 532 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-203ENST00000585448 TRAF7Q6Q0C0 670 aa9.01□□□□□ -0.97
SMAD4-203ENST00000585448 RNF135Q8IUD6 432 aa9.01□□□□□ -0.97
SMAD4-203ENST00000585448 UCN2Q96RP3 112 aa9.01□□□□□ -0.97
SMAD4-203ENST00000585448 LILRA1O75019 489 aa9□□□□□ -0.97
SMAD4-203ENST00000585448 MEIOBQ8N635 442 aa9□□□□□ -0.97
SMAD4-203ENST00000585448 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
SMAD4-203ENST00000585448 CCDC85AQ96PX6 553 aaPredicted RBP9□□□□□ -0.97
SMAD4-203ENST00000585448 CC2D2BQ6DHV5 1058 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 PLEKHM2Q8IWE5 1019 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 PLPP7Q8NBV4 271 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 SIRT1Q96EB6 747 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 CALR3Q96L12 384 aaKnown RBP8.98□□□□□ -0.97
SMAD4-203ENST00000585448 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 TMPRSS4Q9NRS4 437 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 TIMELESSQ9UNS1 1208 aa8.98□□□□□ -0.97
SMAD4-203ENST00000585448 ATP9BO43861 1147 aa8.97□□□□□ -0.97
SMAD4-203ENST00000585448 TRIM26Q12899 539 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-203ENST00000585448 ZNF777Q9ULD5 760 aaPredicted RBP8.97□□□□□ -0.97
SMAD4-203ENST00000585448 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
SMAD4-203ENST00000585448 PCDHB11Q9Y5F2 797 aa8.97□□□□□ -0.97
SMAD4-203ENST00000585448 PIK3CDO00329 1044 aa8.96□□□□□ -0.98
SMAD4-203ENST00000585448 USP4Q13107 963 aa8.96□□□□□ -0.98
SMAD4-203ENST00000585448 ADH1AP07327 375 aa8.95□□□□□ -0.98
SMAD4-203ENST00000585448 RAB15P59190 212 aa8.95□□□□□ -0.98
SMAD4-203ENST00000585448 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
SMAD4-203ENST00000585448 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 ST8SIA5O15466 376 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 SKIP12755 728 aa8.94□□□□□ -0.98
SMAD4-203ENST00000585448 ADD1P35611 737 aaKnown RBP8.94□□□□□ -0.98
SMAD4-203ENST00000585448 MRPL14Q6P1L8 145 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms