RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SOX11P35716 441 aa8.06□□□□□ -1.12
SKA2-210ENST00000584089 NR5A1Q13285 461 aa8.06□□□□□ -1.12
SKA2-210ENST00000584089 KCTD15Q96SI1 283 aaPredicted RBP8.06□□□□□ -1.12
SKA2-210ENST00000584089 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
SKA2-210ENST00000584089 FAM187AA6NFU0 413 aa8.05□□□□□ -1.12
SKA2-210ENST00000584089 PKDCCQ504Y2 493 aa8.04□□□□□ -1.12
SKA2-210ENST00000584089 C14orf37Q86TY3 774 aa8.04□□□□□ -1.12
SKA2-210ENST00000584089 ESPNB1AK53 854 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 FSHRP23945 695 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 NNTQ13423 1086 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 CEP126Q9P2H0 1117 aa8.03□□□□□ -1.12
SKA2-210ENST00000584089 TRAK2O60296 914 aa8.02□□□□□ -1.13
SKA2-210ENST00000584089 AVPP01185 164 aa8.02□□□□□ -1.13
SKA2-210ENST00000584089 CCDC125Q86Z20 511 aa8.02□□□□□ -1.13
SKA2-210ENST00000584089 DHX9Q08211 1270 aaKnown RBP8.01□□□□□ -1.13
SKA2-210ENST00000584089 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
SKA2-210ENST00000584089 RNF20Q5VTR2 975 aa8.01□□□□□ -1.13
SKA2-210ENST00000584089 HPS1Q92902 700 aa8.01□□□□□ -1.13
SKA2-210ENST00000584089 ALG2Q9H553 416 aa8.01□□□□□ -1.13
SKA2-210ENST00000584089 POM121CA8CG34 1229 aa8□□□□□ -1.13
SKA2-210ENST00000584089 GIGYF1O75420 1035 aaPredicted RBP8□□□□□ -1.13
SKA2-210ENST00000584089 NR3C2P08235 984 aa8□□□□□ -1.13
SKA2-210ENST00000584089 CCDC116Q8IYX3 515 aa8□□□□□ -1.13
SKA2-210ENST00000584089 CTC1Q2NKJ3 1217 aa7.99□□□□□ -1.13
SKA2-210ENST00000584089 KLF16Q9BXK1 252 aaPredicted RBP7.99□□□□□ -1.13
SKA2-210ENST00000584089 EMILIN1Q9Y6C2 1016 aa7.99□□□□□ -1.13
SKA2-210ENST00000584089 SMCPP49901 116 aaPredicted RBP7.98□□□□□ -1.13
SKA2-210ENST00000584089 HDGFL1Q5TGJ6 251 aa7.98□□□□□ -1.13
SKA2-210ENST00000584089 Q6ZNB5 142 aa7.98□□□□□ -1.13
SKA2-210ENST00000584089 TRIM52Q96A61 297 aa7.98□□□□□ -1.13
SKA2-210ENST00000584089 ERVH48-1M5A8F1 160 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
SKA2-210ENST00000584089 RAB15P59190 212 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 MYT1Q01538 1121 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 SLFNL1Q499Z3 407 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 PPP1R26Q5T8A7 1209 aaPredicted RBP7.97□□□□□ -1.13
SKA2-210ENST00000584089 CRIPAKQ8N1N5 446 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 PHTF2Q8N3S3 785 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 ADAMTS19Q8TE59 1207 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 PGPEP1Q9NXJ5 209 aa7.97□□□□□ -1.13
SKA2-210ENST00000584089 TIMP2P16035 220 aa7.96□□□□□ -1.14
SKA2-210ENST00000584089 RNF135Q8IUD6 432 aa7.96□□□□□ -1.14
SKA2-210ENST00000584089 AXIN1O15169 862 aa7.95□□□□□ -1.14
SKA2-210ENST00000584089 CAPN5O15484 640 aaPredicted RBP7.95□□□□□ -1.14
SKA2-210ENST00000584089 ZIC2O95409 532 aaPredicted RBP7.95□□□□□ -1.14
SKA2-210ENST00000584089 GLMNQ92990 594 aa7.95□□□□□ -1.14
SKA2-210ENST00000584089 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
SKA2-210ENST00000584089 CHIC2Q9UKJ5 165 aa7.95□□□□□ -1.14
SKA2-210ENST00000584089 ZNF777Q9ULD5 760 aaPredicted RBP7.95□□□□□ -1.14
SKA2-210ENST00000584089 TRAF7Q6Q0C0 670 aa7.94□□□□□ -1.14
SKA2-210ENST00000584089 NFATC2IPQ8NCF5 419 aa7.94□□□□□ -1.14
SKA2-210ENST00000584089 CALR3Q96L12 384 aaKnown RBP7.94□□□□□ -1.14
SKA2-210ENST00000584089 CCDC85AQ96PX6 553 aaPredicted RBP7.93□□□□□ -1.14
SKA2-210ENST00000584089 ZFAND3Q9H8U3 227 aa7.93□□□□□ -1.14
SKA2-210ENST00000584089 AAASQ9NRG9 546 aa7.93□□□□□ -1.14
SKA2-210ENST00000584089 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
SKA2-210ENST00000584089 PCDHB11Q9Y5F2 797 aa7.93□□□□□ -1.14
SKA2-210ENST00000584089 MAP7D1Q3KQU3 841 aa7.92□□□□□ -1.14
SKA2-210ENST00000584089 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
SKA2-210ENST00000584089 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
SKA2-210ENST00000584089 ST8SIA5O15466 376 aa7.91□□□□□ -1.14
SKA2-210ENST00000584089 LILRA1O75019 489 aa7.91□□□□□ -1.14
SKA2-210ENST00000584089 Q6ZVU0 165 aa7.91□□□□□ -1.14
SKA2-210ENST00000584089 PLPP7Q8NBV4 271 aa7.91□□□□□ -1.14
SKA2-210ENST00000584089 DOLKQ9UPQ8 538 aa7.91□□□□□ -1.14
SKA2-210ENST00000584089 PIK3CDO00329 1044 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 LCE2BO14633 110 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 TSGA10IPQ3SY00 556 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 MEIOBQ8N635 442 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 UCN2Q96RP3 112 aa7.9□□□□□ -1.14
SKA2-210ENST00000584089 LZTS3O60299 673 aaPredicted RBP7.89□□□□□ -1.15
SKA2-210ENST00000584089 SKIP12755 728 aa7.89□□□□□ -1.15
SKA2-210ENST00000584089 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
SKA2-210ENST00000584089 SIRT1Q96EB6 747 aa7.89□□□□□ -1.15
SKA2-210ENST00000584089 CDCA7Q9BWT1 371 aaPredicted RBP7.89□□□□□ -1.15
SKA2-210ENST00000584089 CYLDQ9NQC7 956 aa7.89□□□□□ -1.15
SKA2-210ENST00000584089 ATP9BO43861 1147 aa7.88□□□□□ -1.15
SKA2-210ENST00000584089 MYCP01106 439 aaPredicted RBP7.88□□□□□ -1.15
SKA2-210ENST00000584089 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
SKA2-210ENST00000584089 USP4Q13107 963 aa7.88□□□□□ -1.15
SKA2-210ENST00000584089 CBLBQ13191 982 aa7.88□□□□□ -1.15
SKA2-210ENST00000584089 ESF1Q9H501 851 aaKnown RBP7.88□□□□□ -1.15
SKA2-210ENST00000584089 ADH1AP07327 375 aa7.87□□□□□ -1.15
SKA2-210ENST00000584089 SCTRP47872 440 aa7.87□□□□□ -1.15
SKA2-210ENST00000584089 MRPL14Q6P1L8 145 aaKnown RBP7.87□□□□□ -1.15
SKA2-210ENST00000584089 TBC1D9Q6ZT07 1266 aa7.87□□□□□ -1.15
SKA2-210ENST00000584089 TSEN34Q9BSV6 310 aaKnown RBP7.87□□□□□ -1.15
SKA2-210ENST00000584089 USP17L5A8MUK1 530 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 UPP2O95045 317 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 SCARF1Q14162 830 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 OXLD1Q5BKU9 147 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 PLEKHM2Q8IWE5 1019 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 PPP1R12CQ9BZL4 782 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 ATP13A2Q9NQ11 1180 aa7.86□□□□□ -1.15
SKA2-210ENST00000584089 TFIP11Q9UBB9 837 aaKnown RBP7.86□□□□□ -1.15
SKA2-210ENST00000584089 DACH1Q9UI36 760 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms