RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 CAMTA1Q9Y6Y1 1673 aa11.74□□□□□ -0.53
MSI2-218ENST00000583821 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
MSI2-218ENST00000583821 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
MSI2-218ENST00000583821 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
MSI2-218ENST00000583821 RREB1Q92766 1687 aa11.73□□□□□ -0.53
MSI2-218ENST00000583821 RGPD5Q99666 1765 aa11.73□□□□□ -0.53
MSI2-218ENST00000583821 SSH2Q76I76 1423 aa11.72□□□□□ -0.53
MSI2-218ENST00000583821 SPATA31A1Q5TZJ5 1347 aa11.72□□□□□ -0.53
MSI2-218ENST00000583821 NBPF8Q3BBV2 869 aa11.72□□□□□ -0.53
MSI2-218ENST00000583821 STRN4Q9NRL3 753 aa11.72□□□□□ -0.53
MSI2-218ENST00000583821 NUP188Q5SRE5 1749 aa11.72□□□□□ -0.53
MSI2-218ENST00000583821 PARP4Q9UKK3 1724 aaKnown RBP11.72□□□□□ -0.53
MSI2-218ENST00000583821 USP19O94966 1318 aa11.71□□□□□ -0.53
MSI2-218ENST00000583821 CENPJQ9HC77 1338 aaPredicted RBP11.71□□□□□ -0.53
MSI2-218ENST00000583821 PSDA5PKW4 1024 aaPredicted RBP11.71□□□□□ -0.53
MSI2-218ENST00000583821 CABP2Q9NPB3 220 aa11.71□□□□□ -0.53
MSI2-218ENST00000583821 COL18A1P39060 1754 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 PLEKHG3A1L390 1219 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
MSI2-218ENST00000583821 CCDC61Q9Y6R9 512 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 LRRC37A3O60309 1634 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 SLIT3O75094 1523 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
MSI2-218ENST00000583821 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
MSI2-218ENST00000583821 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
MSI2-218ENST00000583821 RASEFQ8IZ41 740 aa11.69□□□□□ -0.54
MSI2-218ENST00000583821 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
MSI2-218ENST00000583821 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
MSI2-218ENST00000583821 USP6P35125 1406 aa11.69□□□□□ -0.54
MSI2-218ENST00000583821 BAG6P46379 1132 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 ABTB2Q8N961 1025 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 L3MBTL2Q969R5 705 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 SIN3AQ96ST3 1273 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 COL5A2P05997 1499 aaPredicted RBP11.68□□□□□ -0.54
MSI2-218ENST00000583821 DISP2A7MBM2 1401 aa11.68□□□□□ -0.54
MSI2-218ENST00000583821 CPDO75976 1380 aa11.67□□□□□ -0.54
MSI2-218ENST00000583821 ZBTB7CA1YPR0 619 aa11.67□□□□□ -0.54
MSI2-218ENST00000583821 NUBP1P53384 320 aa11.67□□□□□ -0.54
MSI2-218ENST00000583821 LARP1Q6PKG0 1096 aaKnown RBP11.67□□□□□ -0.54
MSI2-218ENST00000583821 TSPYL2Q9H2G4 693 aaPredicted RBP11.66□□□□□ -0.54
MSI2-218ENST00000583821 TRIM37O94972 964 aa11.65□□□□□ -0.54
MSI2-218ENST00000583821 CABP1Q9NZU7 370 aa11.65□□□□□ -0.54
MSI2-218ENST00000583821 LTN1O94822 1766 aa11.64□□□□□ -0.55
MSI2-218ENST00000583821 GCP02774 474 aa11.64□□□□□ -0.55
MSI2-218ENST00000583821 EVA1CP58658 441 aa11.64□□□□□ -0.55
MSI2-218ENST00000583821 NEUROD1Q13562 356 aa11.64□□□□□ -0.55
MSI2-218ENST00000583821 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
MSI2-218ENST00000583821 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
MSI2-218ENST00000583821 ROCK2O75116 1388 aaKnown RBP11.64□□□□□ -0.55
MSI2-218ENST00000583821 USP54Q70EL1 1684 aa11.63□□□□□ -0.55
MSI2-218ENST00000583821 NFAT5O94916 1531 aa11.63□□□□□ -0.55
MSI2-218ENST00000583821 CRB1P82279 1406 aa11.62□□□□□ -0.55
MSI2-218ENST00000583821 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
MSI2-218ENST00000583821 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
MSI2-218ENST00000583821 BARGINQ6ZT62 677 aa11.62□□□□□ -0.55
MSI2-218ENST00000583821 NLRP13Q86W25 1043 aa11.62□□□□□ -0.55
MSI2-218ENST00000583821 TCP11L2Q8N4U5 519 aa11.62□□□□□ -0.55
MSI2-218ENST00000583821 CPSF1Q10570 1443 aaKnown RBP11.61□□□□□ -0.55
MSI2-218ENST00000583821 NLRP6P59044 892 aa11.61□□□□□ -0.55
MSI2-218ENST00000583821 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
MSI2-218ENST00000583821 CAMKK2Q96RR4 588 aa11.61□□□□□ -0.55
MSI2-218ENST00000583821 BRD4O60885 1362 aaPredicted RBP11.61□□□□□ -0.55
MSI2-218ENST00000583821 EVC2Q86UK5 1308 aa11.6□□□□□ -0.55
MSI2-218ENST00000583821 AATKQ6ZMQ8 1374 aa11.6□□□□□ -0.55
MSI2-218ENST00000583821 SOX12O15370 315 aa11.6□□□□□ -0.55
MSI2-218ENST00000583821 APBA3O96018 575 aa11.6□□□□□ -0.55
MSI2-218ENST00000583821 PDE3BQ13370 1112 aa11.6□□□□□ -0.55
MSI2-218ENST00000583821 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
MSI2-218ENST00000583821 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
MSI2-218ENST00000583821 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
MSI2-218ENST00000583821 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
MSI2-218ENST00000583821 OVOS2A0A0G2JMS6 1433 aa11.58□□□□□ -0.56
MSI2-218ENST00000583821 OVOS2A0A0J9YW53 1432 aa11.58□□□□□ -0.56
MSI2-218ENST00000583821 OVOS2Q6IE36 1432 aa11.58□□□□□ -0.56
MSI2-218ENST00000583821 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
MSI2-218ENST00000583821 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
MSI2-218ENST00000583821 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
MSI2-218ENST00000583821 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
MSI2-218ENST00000583821 THRAP3Q9Y2W1 955 aaKnown RBP11.57□□□□□ -0.56
MSI2-218ENST00000583821 TOM1L2Q6ZVM7 507 aa11.56□□□□□ -0.56
MSI2-218ENST00000583821 PTF1AQ7RTS3 328 aa11.56□□□□□ -0.56
MSI2-218ENST00000583821 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
MSI2-218ENST00000583821 WDR17Q8IZU2 1322 aa11.56□□□□□ -0.56
MSI2-218ENST00000583821 NHSQ6T4R5 1651 aa11.55□□□□□ -0.56
MSI2-218ENST00000583821 ABCC6O95255 1503 aa11.55□□□□□ -0.56
MSI2-218ENST00000583821 RGPD2P0DJD1 1756 aa11.54□□□□□ -0.56
MSI2-218ENST00000583821 ARHGEF25Q86VW2 580 aa11.54□□□□□ -0.56
MSI2-218ENST00000583821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
MSI2-218ENST00000583821 SP7Q8TDD2 431 aaPredicted RBP11.54□□□□□ -0.56
MSI2-218ENST00000583821 TTC21AQ8NDW8 1320 aa11.54□□□□□ -0.56
MSI2-218ENST00000583821 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
MSI2-218ENST00000583821 BTAF1O14981 1849 aa11.53□□□□□ -0.56
MSI2-218ENST00000583821 DDB1Q16531 1140 aa11.53□□□□□ -0.56
MSI2-218ENST00000583821 DCAF8Q5TAQ9 597 aa11.53□□□□□ -0.56
MSI2-218ENST00000583821 MARCH10Q8NA82 808 aaPredicted RBP11.53□□□□□ -0.56
MSI2-218ENST00000583821 KAT6BQ8WYB5 2073 aa11.53□□□□□ -0.56
MSI2-218ENST00000583821 MYOM1P52179 1685 aa11.52□□□□□ -0.56
MSI2-218ENST00000583821 CSB-PGBD3P0DP91 1061 aa11.52□□□□□ -0.57
MSI2-218ENST00000583821 NME9Q86XW9 330 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms