RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 ABTB2Q8N961 1025 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 NUDT16Q96DE0 195 aaKnown RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CDCA7Q9BWT1 371 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CRB1P82279 1406 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
CDK5RAP3-224ENST00000582275 NUTM2GQ5VZR2 741 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 STAC3Q96MF2 364 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 BCL9O00512 1426 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 MAP3K5Q99683 1374 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 LMO7Q8WWI1 1683 aa12.93□□□□□ -0.34
CDK5RAP3-224ENST00000582275 USP19O94966 1318 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 SLC15A2Q16348 729 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PEAK1Q9H792 1746 aa12.92□□□□□ -0.34
CDK5RAP3-224ENST00000582275 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 SBF2Q86WG5 1849 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ARXQ96QS3 562 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 CCDC61Q9Y6R9 512 aa12.91□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ACEP12821 1306 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 GCP02774 474 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 GPR162Q16538 588 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 TXNRD1Q16881 649 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 AATKQ6ZMQ8 1374 aa12.9□□□□□ -0.34
CDK5RAP3-224ENST00000582275 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 PROM2Q8N271 834 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-224ENST00000582275 TOM1L2Q6ZVM7 507 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 CDK19Q9BWU1 502 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
CDK5RAP3-224ENST00000582275 MARCH10Q8NA82 808 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-224ENST00000582275 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
CDK5RAP3-224ENST00000582275 EXOC5O00471 708 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 PTF1AQ7RTS3 328 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 AKAP12Q02952 1782 aa12.84□□□□□ -0.35
CDK5RAP3-224ENST00000582275 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
CDK5RAP3-224ENST00000582275 ZBTB7CA1YPR0 619 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 POLD1P28340 1107 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SLC16A10Q8TF71 515 aa12.83□□□□□ -0.36
CDK5RAP3-224ENST00000582275 GRIN3BO60391 1043 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 DCAF11Q8TEB1 546 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-224ENST00000582275 DSG3P32926 999 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 NLRP6P59044 892 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CARD10Q9BWT7 1032 aa12.81□□□□□ -0.36
CDK5RAP3-224ENST00000582275 UTRNP46939 3433 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CSB-PGBD3P0DP91 1061 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 PELP1Q8IZL8 1130 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 CCDC7Q96M83 1385 aa12.8□□□□□ -0.36
CDK5RAP3-224ENST00000582275 WNK3Q9BYP7 1800 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SLIT3O75094 1523 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KCNH5Q8NCM2 988 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 PPIP5K1Q6PFW1 1433 aa12.79□□□□□ -0.36
CDK5RAP3-224ENST00000582275 SRPK2P78362 688 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-224ENST00000582275 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
CDK5RAP3-224ENST00000582275 ABCB7O75027 752 aa12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CPSF1Q10570 1443 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TNS2Q63HR2 1409 aa12.77□□□□□ -0.37
CDK5RAP3-224ENST00000582275 HSPA6P17066 643 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 SLC27A3Q5K4L6 730 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 AXIN2Q9Y2T1 843 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 USP6P35125 1406 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 PAPPAQ13219 1627 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
CDK5RAP3-224ENST00000582275 COL18A1P39060 1754 aa12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ARHGEF25Q86VW2 580 aa12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 GPBP1L1Q9HC44 474 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ABCC6O95255 1503 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ACSBG1Q96GR2 724 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TRPM1Q7Z4N2 1603 aa12.72□□□□□ -0.37
CDK5RAP3-224ENST00000582275 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CEP350Q5VT06 3117 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 KAT6BQ8WYB5 2073 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 POLA2Q14181 598 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CABP2Q9NPB3 220 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
CDK5RAP3-224ENST00000582275 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.38
CDK5RAP3-224ENST00000582275 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 IL2RBP14784 551 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 HMGB2P26583 209 aaKnown RBP12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 NLGN2Q8NFZ4 835 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 KIAA1210Q9ULL0 1709 aa12.7□□□□□ -0.38
CDK5RAP3-224ENST00000582275 BTAF1O14981 1849 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 PNPLA7Q6ZV29 1317 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 YBX3P16989 372 aaKnown RBP eCLIP12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
CDK5RAP3-224ENST00000582275 PIK3C2AO00443 1686 aa12.68□□□□□ -0.38
CDK5RAP3-224ENST00000582275 RGPD5Q99666 1765 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms