RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CASZ1Q86V15 1759 aa17.7■□□□□ 0.42
CDK5RAP3-216ENST00000579853 USP6P35125 1406 aa17.7■□□□□ 0.42
CDK5RAP3-216ENST00000579853 WDR17Q8IZU2 1322 aa17.7■□□□□ 0.42
CDK5RAP3-216ENST00000579853 SLIT3O75094 1523 aa17.69■□□□□ 0.42
CDK5RAP3-216ENST00000579853 CABP2Q9NPB3 220 aa17.69■□□□□ 0.42
CDK5RAP3-216ENST00000579853 STK32BQ9NY57 414 aa17.68■□□□□ 0.42
CDK5RAP3-216ENST00000579853 GOLGB1Q14789 3259 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-216ENST00000579853 MARCH10Q8NA82 808 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-216ENST00000579853 KCNH5Q8NCM2 988 aa17.67■□□□□ 0.42
CDK5RAP3-216ENST00000579853 CABP1Q9NZU7 370 aa17.67■□□□□ 0.42
CDK5RAP3-216ENST00000579853 ZBTB7AO95365 584 aa17.66■□□□□ 0.42
CDK5RAP3-216ENST00000579853 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
CDK5RAP3-216ENST00000579853 PROM2Q8N271 834 aa17.66■□□□□ 0.42
CDK5RAP3-216ENST00000579853 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
CDK5RAP3-216ENST00000579853 PTGER2P43116 358 aa17.65■□□□□ 0.42
CDK5RAP3-216ENST00000579853 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
CDK5RAP3-216ENST00000579853 CARD10Q9BWT7 1032 aa17.65■□□□□ 0.42
CDK5RAP3-216ENST00000579853 CPSF1Q10570 1443 aaKnown RBP17.64■□□□□ 0.42
CDK5RAP3-216ENST00000579853 COL18A1P39060 1754 aa17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 WNK3Q9BYP7 1800 aa17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 EXOC5O00471 708 aa17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 SLC15A2Q16348 729 aa17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 ZNF692Q9BU19 519 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 MTFR1LQ9H019 292 aa17.64■□□□□ 0.41
CDK5RAP3-216ENST00000579853 CSB-PGBD3P0DP91 1061 aa17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 PTF1AQ7RTS3 328 aa17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 ARHGEF25Q86VW2 580 aa17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 ATF5Q9Y2D1 282 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 AXIN2Q9Y2T1 843 aa17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 CEP350Q5VT06 3117 aa17.63■□□□□ 0.41
CDK5RAP3-216ENST00000579853 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
CDK5RAP3-216ENST00000579853 SYT17Q9BSW7 474 aa17.62■□□□□ 0.41
CDK5RAP3-216ENST00000579853 PDGFDQ9GZP0 370 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-216ENST00000579853 CCDC7Q96M83 1385 aa17.62■□□□□ 0.41
CDK5RAP3-216ENST00000579853 MYOM1P52179 1685 aa17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 CHD4Q14839 1912 aa17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 EVC2Q86UK5 1308 aa17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
CDK5RAP3-216ENST00000579853 TTC21AQ8NDW8 1320 aa17.59■□□□□ 0.41
CDK5RAP3-216ENST00000579853 ABCC6O95255 1503 aa17.58■□□□□ 0.41
CDK5RAP3-216ENST00000579853 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
CDK5RAP3-216ENST00000579853 TNS2Q63HR2 1409 aa17.57■□□□□ 0.4
CDK5RAP3-216ENST00000579853 SGIP1Q9BQI5 828 aa17.57■□□□□ 0.4
CDK5RAP3-216ENST00000579853 MAP3K5Q99683 1374 aa17.56■□□□□ 0.4
CDK5RAP3-216ENST00000579853 TRPM1Q7Z4N2 1603 aa17.56■□□□□ 0.4
CDK5RAP3-216ENST00000579853 RGPD5Q99666 1765 aa17.56■□□□□ 0.4
CDK5RAP3-216ENST00000579853 ARXQ96QS3 562 aa17.55■□□□□ 0.4
CDK5RAP3-216ENST00000579853 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
CDK5RAP3-216ENST00000579853 NHSQ6T4R5 1651 aa17.54■□□□□ 0.4
CDK5RAP3-216ENST00000579853 SOX12O15370 315 aa17.53■□□□□ 0.4
CDK5RAP3-216ENST00000579853 C1QTNF8P60827 252 aa17.53■□□□□ 0.4
CDK5RAP3-216ENST00000579853 NFAT5O94916 1531 aa17.52■□□□□ 0.4
CDK5RAP3-216ENST00000579853 SENP3-EIF4A1A0A087X0R7 540 aa17.52■□□□□ 0.4
CDK5RAP3-216ENST00000579853 SLC16A10Q8TF71 515 aa17.51■□□□□ 0.39
CDK5RAP3-216ENST00000579853 KTN1Q86UP2 1357 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-216ENST00000579853 IL2RBP14784 551 aa17.5■□□□□ 0.39
CDK5RAP3-216ENST00000579853 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
CDK5RAP3-216ENST00000579853 ERBB3P21860 1342 aa17.49■□□□□ 0.39
CDK5RAP3-216ENST00000579853 NLRP2Q9NX02 1062 aa17.49■□□□□ 0.39
CDK5RAP3-216ENST00000579853 PAPPAQ13219 1627 aa17.48■□□□□ 0.39
CDK5RAP3-216ENST00000579853 POLD1P28340 1107 aa17.48■□□□□ 0.39
CDK5RAP3-216ENST00000579853 GPR162Q16538 588 aa17.48■□□□□ 0.39
CDK5RAP3-216ENST00000579853 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
CDK5RAP3-216ENST00000579853 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
CDK5RAP3-216ENST00000579853 BTAF1O14981 1849 aa17.46■□□□□ 0.39
CDK5RAP3-216ENST00000579853 ROCK2O75116 1388 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP3-216ENST00000579853 L3MBTL2Q969R5 705 aa17.45■□□□□ 0.38
CDK5RAP3-216ENST00000579853 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP3-216ENST00000579853 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
CDK5RAP3-216ENST00000579853 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
CDK5RAP3-216ENST00000579853 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
CDK5RAP3-216ENST00000579853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
CDK5RAP3-216ENST00000579853 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
CDK5RAP3-216ENST00000579853 LRRC4BQ9NT99 713 aa17.43■□□□□ 0.38
CDK5RAP3-216ENST00000579853 QSER1Q2KHR3 1735 aa17.43■□□□□ 0.38
CDK5RAP3-216ENST00000579853 AKT1S1Q96B36 256 aa17.42■□□□□ 0.38
CDK5RAP3-216ENST00000579853 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CDK5RAP3-216ENST00000579853 LTN1O94822 1766 aa17.41■□□□□ 0.38
CDK5RAP3-216ENST00000579853 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-216ENST00000579853 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
CDK5RAP3-216ENST00000579853 TFCP2L1Q9NZI6 479 aa17.4■□□□□ 0.38
CDK5RAP3-216ENST00000579853 NME9Q86XW9 330 aa17.39■□□□□ 0.37
CDK5RAP3-216ENST00000579853 COL24A1Q17RW2 1714 aa17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 HMGB2P26583 209 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 PELP1Q8IZL8 1130 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 EDC4Q6P2E9 1401 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-216ENST00000579853 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-216ENST00000579853 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
CDK5RAP3-216ENST00000579853 FAM208AQ9UK61 1670 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-216ENST00000579853 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
CDK5RAP3-216ENST00000579853 IP6K1Q92551 441 aa17.36■□□□□ 0.37
CDK5RAP3-216ENST00000579853 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
CDK5RAP3-216ENST00000579853 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
CDK5RAP3-216ENST00000579853 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
CDK5RAP3-216ENST00000579853 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms