RNA–Protein interactions for RNA: ENST00000578578.5

KRT18P55-202, Transcript of keratin 18 pseudogene 55, humanhuman

BASIC

Gene KRT18P55, Length 1,546 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-202ENST00000578578 ORAI2Q96SN7 254 aa23.41■■□□□ 1.34
KRT18P55-202ENST00000578578 STRCQ7RTU9 1775 aa23.4■■□□□ 1.34
KRT18P55-202ENST00000578578 HMOX1P09601 288 aa23.4■■□□□ 1.34
KRT18P55-202ENST00000578578 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.34
KRT18P55-202ENST00000578578 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.34
KRT18P55-202ENST00000578578 MST1RQ04912 1400 aa23.39■■□□□ 1.34
KRT18P55-202ENST00000578578 RTL1A6NKG5 1358 aa23.39■■□□□ 1.33
KRT18P55-202ENST00000578578 CT47B1P0C2W7 299 aaPredicted RBP23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 AMPHP49418 695 aa23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 ARHGEF10O15013 1369 aa23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 RGPD1P0DJD0 1748 aa23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 CALD1Q05682 793 aaKnown RBP23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 KCNH5Q8NCM2 988 aa23.38■■□□□ 1.33
KRT18P55-202ENST00000578578 LMOD3Q0VAK6 560 aa23.37■■□□□ 1.33
KRT18P55-202ENST00000578578 PHACTR3Q96KR7 559 aa23.37■■□□□ 1.33
KRT18P55-202ENST00000578578 FOXO3O43524 673 aa23.36■■□□□ 1.33
KRT18P55-202ENST00000578578 MSH6P52701 1360 aa23.36■■□□□ 1.33
KRT18P55-202ENST00000578578 SOX12O15370 315 aa23.35■■□□□ 1.33
KRT18P55-202ENST00000578578 HOXC9P31274 260 aa23.33■■□□□ 1.33
KRT18P55-202ENST00000578578 NUTM2GQ5VZR2 741 aa23.33■■□□□ 1.33
KRT18P55-202ENST00000578578 SULT6B1Q6IMI4 303 aa23.33■■□□□ 1.33
KRT18P55-202ENST00000578578 KRT28Q7Z3Y7 464 aa23.33■■□□□ 1.33
KRT18P55-202ENST00000578578 NFAT5O94916 1531 aa23.33■■□□□ 1.32
KRT18P55-202ENST00000578578 TRPM3Q9HCF6 1732 aaPredicted RBP23.32■■□□□ 1.32
KRT18P55-202ENST00000578578 KDRP35968 1356 aa23.32■■□□□ 1.32
KRT18P55-202ENST00000578578 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
KRT18P55-202ENST00000578578 FANCIQ9NVI1 1328 aa23.31■■□□□ 1.32
KRT18P55-202ENST00000578578 SLIT3O75094 1523 aa23.3■■□□□ 1.32
KRT18P55-202ENST00000578578 USP19O94966 1318 aa23.3■■□□□ 1.32
KRT18P55-202ENST00000578578 PHRF1Q9P1Y6 1649 aaKnown RBP23.29■■□□□ 1.32
KRT18P55-202ENST00000578578 PLIN1O60240 522 aa23.29■■□□□ 1.32
KRT18P55-202ENST00000578578 IP6K1Q92551 441 aa23.29■■□□□ 1.32
KRT18P55-202ENST00000578578 EXOC6Q8TAG9 804 aa23.28■■□□□ 1.32
KRT18P55-202ENST00000578578 RARSP54136 660 aaKnown RBP23.28■■□□□ 1.32
KRT18P55-202ENST00000578578 B4GALNT3Q6L9W6 998 aa23.28■■□□□ 1.32
KRT18P55-202ENST00000578578 AEBP1Q8IUX7 1158 aa23.28■■□□□ 1.32
KRT18P55-202ENST00000578578 CCDC136Q96JN2 1154 aa23.28■■□□□ 1.32
KRT18P55-202ENST00000578578 EYA1Q99502 592 aa23.27■■□□□ 1.32
KRT18P55-202ENST00000578578 NPHP3Q7Z494 1330 aa23.27■■□□□ 1.32
KRT18P55-202ENST00000578578 BCAR3O75815 825 aa23.25■■□□□ 1.31
KRT18P55-202ENST00000578578 GNAI1P63096 354 aa23.25■■□□□ 1.31
KRT18P55-202ENST00000578578 PDE3AQ14432 1141 aa23.25■■□□□ 1.31
KRT18P55-202ENST00000578578 IFT57Q9NWB7 429 aa23.25■■□□□ 1.31
KRT18P55-202ENST00000578578 GCP02774 474 aa23.24■■□□□ 1.31
KRT18P55-202ENST00000578578 XIRP1Q702N8 1843 aaKnown RBP23.24■■□□□ 1.31
KRT18P55-202ENST00000578578 ALS2Q96Q42 1657 aa23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 ZNF853P0CG23 659 aa23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 XPCQ01831 940 aaPredicted RBP23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 ARHGEF25Q86VW2 580 aa23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 TSR2Q969E8 191 aaKnown RBP23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 CRBNQ96SW2 442 aa23.23■■□□□ 1.31
KRT18P55-202ENST00000578578 LTN1O94822 1766 aa23.22■■□□□ 1.31
KRT18P55-202ENST00000578578 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
KRT18P55-202ENST00000578578 EXOSC9Q06265 439 aaKnown RBP23.22■■□□□ 1.31
KRT18P55-202ENST00000578578 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
KRT18P55-202ENST00000578578 GAS2L2Q8NHY3 880 aa23.2■■□□□ 1.3
KRT18P55-202ENST00000578578 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
KRT18P55-202ENST00000578578 DLG5Q8TDM6 1919 aa23.19■■□□□ 1.3
KRT18P55-202ENST00000578578 HTATSF1O43719 755 aaKnown RBP23.18■■□□□ 1.3
KRT18P55-202ENST00000578578 LMOD2Q6P5Q4 547 aa23.18■■□□□ 1.3
KRT18P55-202ENST00000578578 PXDNQ92626 1479 aa23.17■■□□□ 1.3
KRT18P55-202ENST00000578578 TNS3Q68CZ2 1445 aa23.17■■□□□ 1.3
KRT18P55-202ENST00000578578 MS4A1P11836 297 aa23.15■■□□□ 1.3
KRT18P55-202ENST00000578578 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
KRT18P55-202ENST00000578578 AAMPQ13685 434 aa23.15■■□□□ 1.3
KRT18P55-202ENST00000578578 ALDH1L2Q3SY69 923 aa23.15■■□□□ 1.3
KRT18P55-202ENST00000578578 THUMPD2Q9BTF0 503 aaKnown RBP23.15■■□□□ 1.3
KRT18P55-202ENST00000578578 MTHFSDQ2M296 383 aaKnown RBP23.14■■□□□ 1.3
KRT18P55-202ENST00000578578 BRINP3Q76B58 766 aa23.14■■□□□ 1.3
KRT18P55-202ENST00000578578 SLAIN2Q9P270 581 aa23.14■■□□□ 1.3
KRT18P55-202ENST00000578578 SPATA31A3Q5VYP0 1347 aa23.14■■□□□ 1.29
KRT18P55-202ENST00000578578 MED1Q15648 1581 aaPredicted RBP23.13■■□□□ 1.29
KRT18P55-202ENST00000578578 BRPF1P55201 1214 aaPredicted RBP23.13■■□□□ 1.29
KRT18P55-202ENST00000578578 LTV1Q96GA3 475 aaPredicted RBP23.13■■□□□ 1.29
KRT18P55-202ENST00000578578 MBIPQ9NS73 344 aa23.13■■□□□ 1.29
KRT18P55-202ENST00000578578 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
KRT18P55-202ENST00000578578 NCAPD2Q15021 1401 aa23.12■■□□□ 1.29
KRT18P55-202ENST00000578578 FAM83GA6ND36 823 aa23.12■■□□□ 1.29
KRT18P55-202ENST00000578578 RTF1Q92541 710 aaKnown RBP23.12■■□□□ 1.29
KRT18P55-202ENST00000578578 ABCC6O95255 1503 aa23.11■■□□□ 1.29
KRT18P55-202ENST00000578578 CHL1O00533 1208 aa23.1■■□□□ 1.29
KRT18P55-202ENST00000578578 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
KRT18P55-202ENST00000578578 FRAT1Q92837 279 aaPredicted RBP23.1■■□□□ 1.29
KRT18P55-202ENST00000578578 SMC4Q9NTJ3 1288 aa23.1■■□□□ 1.29
KRT18P55-202ENST00000578578 CRB1P82279 1406 aa23.09■■□□□ 1.29
KRT18P55-202ENST00000578578 HAP1P54257 671 aaPredicted RBP23.09■■□□□ 1.29
KRT18P55-202ENST00000578578 NBPF6Q5VWK0 638 aa23.09■■□□□ 1.29
KRT18P55-202ENST00000578578 SSH1Q8WYL5 1049 aa23.09■■□□□ 1.29
KRT18P55-202ENST00000578578 NBPF4Q96M43 638 aa23.09■■□□□ 1.29
KRT18P55-202ENST00000578578 VAMP4O75379 141 aa23.08■■□□□ 1.29
KRT18P55-202ENST00000578578 DCTN1Q14203 1278 aa23.08■■□□□ 1.29
KRT18P55-202ENST00000578578 DDX17Q92841 729 aaKnown RBP23.08■■□□□ 1.29
KRT18P55-202ENST00000578578 SOS2Q07890 1332 aaPredicted RBP23.08■■□□□ 1.29
KRT18P55-202ENST00000578578 KIF16BQ96L93 1317 aa23.08■■□□□ 1.29
KRT18P55-202ENST00000578578 GNAT3A8MTJ3 354 aa23.07■■□□□ 1.28
KRT18P55-202ENST00000578578 IPO8O15397 1037 aaKnown RBP23.07■■□□□ 1.28
KRT18P55-202ENST00000578578 MCM10Q7L590 875 aa23.07■■□□□ 1.28
KRT18P55-202ENST00000578578 KIAA0232Q92628 1395 aa23.06■■□□□ 1.28
KRT18P55-202ENST00000578578 ZBTB7CA1YPR0 619 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms