RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, human

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP3-206	ENST00000576523	NME9	Q86XW9	330 aa		12.1	□□□□□ -0.47
NCBP3-206	ENST00000576523	TERF2IP	Q9NYB0	399 aa		12.1	□□□□□ -0.47
NCBP3-206	ENST00000576523	WNK3	Q9BYP7	1800 aa		12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	PANK3	Q9H999	370 aa		12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	SPATA31A6	Q5VVP1	1343 aa		12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	TTC21A	Q8NDW8	1320 aa		12.09	□□□□□ -0.47
NCBP3-206	ENST00000576523	LMOD2	Q6P5Q4	547 aa		12.08	□□□□□ -0.48
NCBP3-206	ENST00000576523	ABTB2	Q8N961	1025 aa		12.08	□□□□□ -0.48
NCBP3-206	ENST00000576523	PER1	O15534	1290 aa	Predicted RBP	12.07	□□□□□ -0.48
NCBP3-206	ENST00000576523	NUTM2B	A6NNL0	878 aa	Predicted RBP	12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	NUTM2E	B1AL46	878 aa	Predicted RBP	12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	FYB1	O15117	783 aa		12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	PLEKHG5	O94827	1062 aa		12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	BRPF1	P55201	1214 aa	Predicted RBP	12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	NUTM2A	Q8IVF1	878 aa	Predicted RBP	12.06	□□□□□ -0.48
NCBP3-206	ENST00000576523	CAMTA1	Q9Y6Y1	1673 aa		12.05	□□□□□ -0.48
NCBP3-206	ENST00000576523	SLIT2	O94813	1529 aa		12.05	□□□□□ -0.48
NCBP3-206	ENST00000576523	BRWD3	Q6RI45	1802 aa		12.04	□□□□□ -0.48
NCBP3-206	ENST00000576523	NLRP6	P59044	892 aa		12.04	□□□□□ -0.48
NCBP3-206	ENST00000576523	GGNBP2	Q9H3C7	697 aa		12.04	□□□□□ -0.48
NCBP3-206	ENST00000576523	FBLN1	P23142	703 aa		12.03	□□□□□ -0.48
NCBP3-206	ENST00000576523	NLRP13	Q86W25	1043 aa		12.03	□□□□□ -0.48
NCBP3-206	ENST00000576523	FAM208A	Q9UK61	1670 aa	Known RBP	12.03	□□□□□ -0.48
NCBP3-206	ENST00000576523	KIAA0232	Q92628	1395 aa		12.03	□□□□□ -0.48
NCBP3-206	ENST00000576523	ABCC6	O95255	1503 aa		12.02	□□□□□ -0.48
NCBP3-206	ENST00000576523	ADAMTS2	O95450	1211 aa		12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	GC	P02774	474 aa		12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	NPM2	Q86SE8	214 aa	Known RBP	12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	RGS17	Q9UGC6	210 aa	Predicted RBP	12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	CPD	O75976	1380 aa		12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	BCL9L	Q86UU0	1499 aa		12.02	□□□□□ -0.49
NCBP3-206	ENST00000576523	GLI3	P10071	1580 aa		12.01	□□□□□ -0.49
NCBP3-206	ENST00000576523	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.01	□□□□□ -0.49
NCBP3-206	ENST00000576523	FAM83G	A6ND36	823 aa		12	□□□□□ -0.49
NCBP3-206	ENST00000576523	ZC3H6	P61129	1189 aa	Known RBP	12	□□□□□ -0.49
NCBP3-206	ENST00000576523	CGNL1	Q0VF96	1302 aa		12	□□□□□ -0.49
NCBP3-206	ENST00000576523	VIRMA	Q69YN4	1812 aa	Known RBP	12	□□□□□ -0.49
NCBP3-206	ENST00000576523	SOX12	O15370	315 aa		11.99	□□□□□ -0.49
NCBP3-206	ENST00000576523	DDX10	Q13206	875 aa	Known RBP	11.99	□□□□□ -0.49
NCBP3-206	ENST00000576523	CHRNA2	Q15822	529 aa		11.99	□□□□□ -0.49
NCBP3-206	ENST00000576523	NSD2	O96028	1365 aa		11.99	□□□□□ -0.49
NCBP3-206	ENST00000576523	RGPD1	P0DJD0	1748 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	SHANK3	Q9BYB0	1731 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	COL5A2	P05997	1499 aa	Predicted RBP	11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	NPC1L1	Q9UHC9	1359 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	AFF2	P51816	1311 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	ARHGEF25	Q86VW2	580 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	COG3	Q96JB2	828 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	C8orf37	Q96NL8	207 aa		11.98	□□□□□ -0.49
NCBP3-206	ENST00000576523	ATRN	O75882	1429 aa		11.97	□□□□□ -0.49
NCBP3-206	ENST00000576523	SMG6	Q86US8	1419 aa	Known RBP	11.97	□□□□□ -0.49
NCBP3-206	ENST00000576523	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.97	□□□□□ -0.49
NCBP3-206	ENST00000576523	KNSTRN	Q9Y448	316 aa		11.97	□□□□□ -0.49
NCBP3-206	ENST00000576523	THSD7A	Q9UPZ6	1657 aa		11.97	□□□□□ -0.49
NCBP3-206	ENST00000576523	AATK	Q6ZMQ8	1374 aa		11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	MAP3K19	Q56UN5	1328 aa		11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	GTPBP6	O43824	516 aa	Predicted RBP	11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	MEX3C	Q5U5Q3	659 aa	Known RBP	11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	AXIN2	Q9Y2T1	843 aa		11.96	□□□□□ -0.49
NCBP3-206	ENST00000576523	PARP4	Q9UKK3	1724 aa	Known RBP	11.95	□□□□□ -0.5
NCBP3-206	ENST00000576523	RRS1	Q15050	365 aa	Known RBP	11.95	□□□□□ -0.5
NCBP3-206	ENST00000576523	KCNH5	Q8NCM2	988 aa		11.95	□□□□□ -0.5
NCBP3-206	ENST00000576523	PRDM11	Q9NQV5	511 aa		11.95	□□□□□ -0.5
NCBP3-206	ENST00000576523	CC2D1B	Q5T0F9	858 aa	Known RBP	11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	POTEA	Q6S8J7	498 aa		11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	NGLY1	Q96IV0	654 aa		11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	BTG4	Q9NY30	223 aa		11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	EMILIN1	Q9Y6C2	1016 aa		11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	COL3A1	P02461	1466 aa	Predicted RBP	11.94	□□□□□ -0.5
NCBP3-206	ENST00000576523	KAT6B	Q8WYB5	2073 aa		11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	SBF2	Q86WG5	1849 aa		11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	ZBTB7C	A1YPR0	619 aa		11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	NKX1-1	Q15270	411 aa	Predicted RBP	11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	CDK12	Q9NYV4	1490 aa	Predicted RBP	11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	LRRC37A3	O60309	1634 aa		11.93	□□□□□ -0.5
NCBP3-206	ENST00000576523	RTL1	A6NKG5	1358 aa		11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	PARD3	Q8TEW0	1356 aa		11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	TNNT2	P45379	298 aa	Predicted RBP	11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	UNC5CL	Q8IV45	518 aa		11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	POLK	Q9UBT6	870 aa		11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	USP21	Q9UK80	565 aa		11.92	□□□□□ -0.5
NCBP3-206	ENST00000576523	HOXC9	P31274	260 aa		11.91	□□□□□ -0.5
NCBP3-206	ENST00000576523	CNGB1	Q14028	1251 aa	Predicted RBP	11.91	□□□□□ -0.5
NCBP3-206	ENST00000576523	MORC1	Q86VD1	984 aa		11.91	□□□□□ -0.5
NCBP3-206	ENST00000576523	BLM	P54132	1417 aa	Predicted RBP	11.91	□□□□□ -0.5
NCBP3-206	ENST00000576523	PKD1L3	Q7Z443	1732 aa		11.91	□□□□□ -0.5
NCBP3-206	ENST00000576523	PLCD3	Q8N3E9	789 aa		11.9	□□□□□ -0.5
NCBP3-206	ENST00000576523	IP6K1	Q92551	441 aa		11.9	□□□□□ -0.5
NCBP3-206	ENST00000576523	FLT4	P35916	1363 aa		11.9	□□□□□ -0.5
NCBP3-206	ENST00000576523	KIF24	Q5T7B8	1368 aa		11.9	□□□□□ -0.5
NCBP3-206	ENST00000576523	DLG5	Q8TDM6	1919 aa		11.9	□□□□□ -0.51
NCBP3-206	ENST00000576523	ERBB3	P21860	1342 aa		11.89	□□□□□ -0.51
NCBP3-206	ENST00000576523	HSP90AB2P	Q58FF8	381 aa		11.89	□□□□□ -0.51
NCBP3-206	ENST00000576523	LARP1	Q6PKG0	1096 aa	Known RBP	11.89	□□□□□ -0.51
NCBP3-206	ENST00000576523	INSR	P06213	1382 aa		11.89	□□□□□ -0.51
NCBP3-206	ENST00000576523	EP400	Q96L91	3159 aa		11.88	□□□□□ -0.51
NCBP3-206	ENST00000576523	RGS12	O14924	1447 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms