RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-206ENST00000576523 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
NCBP3-206ENST00000576523 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
NCBP3-206ENST00000576523 CCDC180Q9P1Z9 1646 aa18.85■□□□□ 0.61
NCBP3-206ENST00000576523 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
NCBP3-206ENST00000576523 ABCC9O60706 1549 aa18.14■□□□□ 0.49
NCBP3-206ENST00000576523 ZCCHC6Q5VYS8 1495 aaKnown RBP17.7■□□□□ 0.42
NCBP3-206ENST00000576523 NACADO15069 1562 aa17.56■□□□□ 0.4
NCBP3-206ENST00000576523 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
NCBP3-206ENST00000576523 DCAF1Q9Y4B6 1507 aa17.52■□□□□ 0.4
NCBP3-206ENST00000576523 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
NCBP3-206ENST00000576523 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
NCBP3-206ENST00000576523 DCAF8L2P0C7V8 631 aa17.42■□□□□ 0.38
NCBP3-206ENST00000576523 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
NCBP3-206ENST00000576523 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
NCBP3-206ENST00000576523 BICRAQ9NZM4 1560 aa17.13■□□□□ 0.33
NCBP3-206ENST00000576523 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
NCBP3-206ENST00000576523 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
NCBP3-206ENST00000576523 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
NCBP3-206ENST00000576523 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
NCBP3-206ENST00000576523 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
NCBP3-206ENST00000576523 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
NCBP3-206ENST00000576523 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
NCBP3-206ENST00000576523 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
NCBP3-206ENST00000576523 BAZ1AQ9NRL2 1556 aaPredicted RBP16.38■□□□□ 0.21
NCBP3-206ENST00000576523 MROH2BQ7Z745 1585 aa16.36■□□□□ 0.21
NCBP3-206ENST00000576523 PEG3Q9GZU2 1588 aa16.28■□□□□ 0.2
NCBP3-206ENST00000576523 WIZO95785 1651 aa16.26■□□□□ 0.19
NCBP3-206ENST00000576523 ATAD2BQ9ULI0 1458 aa16.23■□□□□ 0.19
NCBP3-206ENST00000576523 SMARCA2P51531 1590 aa16.21■□□□□ 0.19
NCBP3-206ENST00000576523 RSF1Q96T23 1441 aaPredicted RBP16.18■□□□□ 0.18
NCBP3-206ENST00000576523 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
NCBP3-206ENST00000576523 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
NCBP3-206ENST00000576523 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
NCBP3-206ENST00000576523 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
NCBP3-206ENST00000576523 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
NCBP3-206ENST00000576523 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
NCBP3-206ENST00000576523 NESP48681 1621 aa15.81■□□□□ 0.12
NCBP3-206ENST00000576523 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
NCBP3-206ENST00000576523 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
NCBP3-206ENST00000576523 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
NCBP3-206ENST00000576523 LAMC3Q9Y6N6 1575 aa15.76■□□□□ 0.11
NCBP3-206ENST00000576523 KIF21AQ7Z4S6 1674 aa15.75■□□□□ 0.11
NCBP3-206ENST00000576523 KCNA4P22459 653 aa15.69■□□□□ 0.1
NCBP3-206ENST00000576523 CFTRP13569 1480 aa15.67■□□□□ 0.1
NCBP3-206ENST00000576523 CADPSQ9ULU8 1353 aa15.67■□□□□ 0.1
NCBP3-206ENST00000576523 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
NCBP3-206ENST00000576523 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
NCBP3-206ENST00000576523 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
NCBP3-206ENST00000576523 FANCD2Q9BXW9 1451 aa15.53■□□□□ 0.08
NCBP3-206ENST00000576523 PDS5BQ9NTI5 1447 aa15.52■□□□□ 0.08
NCBP3-206ENST00000576523 CSRNP3Q8WYN3 585 aa15.52■□□□□ 0.08
NCBP3-206ENST00000576523 CEP164Q9UPV0 1460 aa15.48■□□□□ 0.07
NCBP3-206ENST00000576523 WDR62O43379 1518 aa15.44■□□□□ 0.06
NCBP3-206ENST00000576523 MRC2Q9UBG0 1479 aa15.44■□□□□ 0.06
NCBP3-206ENST00000576523 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
NCBP3-206ENST00000576523 DNMBPQ6XZF7 1577 aa15.36■□□□□ 0.05
NCBP3-206ENST00000576523 CUX2O14529 1486 aa15.35■□□□□ 0.05
NCBP3-206ENST00000576523 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
NCBP3-206ENST00000576523 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
NCBP3-206ENST00000576523 CUX1P39880 1505 aa15.33■□□□□ 0.05
NCBP3-206ENST00000576523 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
NCBP3-206ENST00000576523 SYNJ1O43426 1573 aa15.3■□□□□ 0.04
NCBP3-206ENST00000576523 TOP2BQ02880 1626 aa15.26■□□□□ 0.03
NCBP3-206ENST00000576523 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
NCBP3-206ENST00000576523 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
NCBP3-206ENST00000576523 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
NCBP3-206ENST00000576523 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.03
NCBP3-206ENST00000576523 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
NCBP3-206ENST00000576523 SLC4A1APQ9BWU0 796 aaKnown RBP15.19■□□□□ 0.02
NCBP3-206ENST00000576523 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
NCBP3-206ENST00000576523 ADRA2BP18089 450 aa15.15■□□□□ 0.02
NCBP3-206ENST00000576523 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
NCBP3-206ENST00000576523 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
NCBP3-206ENST00000576523 ZNF608Q9ULD9 1512 aaPredicted RBP15.13■□□□□ 0.01
NCBP3-206ENST00000576523 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
NCBP3-206ENST00000576523 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
NCBP3-206ENST00000576523 ABCA5Q8WWZ7 1642 aa15.09■□□□□ 0.01
NCBP3-206ENST00000576523 SOGA1O94964 1423 aa15.09■□□□□ 0.01
NCBP3-206ENST00000576523 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
NCBP3-206ENST00000576523 AQRO60306 1485 aaKnown RBP eCLIP15.02■□□□□ -0
NCBP3-206ENST00000576523 RTN4Q9NQC3 1192 aaKnown RBP15.01□□□□□ -0.01
NCBP3-206ENST00000576523 CHD1O14646 1710 aa15□□□□□ -0.01
NCBP3-206ENST00000576523 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
NCBP3-206ENST00000576523 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
NCBP3-206ENST00000576523 RUSC2Q8N2Y8 1516 aa14.91□□□□□ -0.02
NCBP3-206ENST00000576523 ADAMTS12P58397 1594 aa14.9□□□□□ -0.02
NCBP3-206ENST00000576523 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
NCBP3-206ENST00000576523 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
NCBP3-206ENST00000576523 ERICH3Q5RHP9 1530 aa14.88□□□□□ -0.03
NCBP3-206ENST00000576523 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
NCBP3-206ENST00000576523 MAGI1Q96QZ7 1491 aaPredicted RBP14.86□□□□□ -0.03
NCBP3-206ENST00000576523 CUL7Q14999 1698 aa14.84□□□□□ -0.03
NCBP3-206ENST00000576523 KIF27Q86VH2 1401 aa14.83□□□□□ -0.03
NCBP3-206ENST00000576523 SYNJ2O15056 1496 aa14.81□□□□□ -0.04
NCBP3-206ENST00000576523 IGF1RP08069 1367 aa14.78□□□□□ -0.04
NCBP3-206ENST00000576523 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
NCBP3-206ENST00000576523 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
NCBP3-206ENST00000576523 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
NCBP3-206ENST00000576523 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
NCBP3-206ENST00000576523 CTTNBP2Q8WZ74 1663 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms