RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 AKAP12Q02952 1782 aa8.7□□□□□ -1.02
PRPF8-209ENST00000573725 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
PRPF8-209ENST00000573725 ZC3H6P61129 1189 aaKnown RBP8.69□□□□□ -1.02
PRPF8-209ENST00000573725 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
PRPF8-209ENST00000573725 ACEP12821 1306 aa8.69□□□□□ -1.02
PRPF8-209ENST00000573725 SPATA31A1Q5TZJ5 1347 aa8.69□□□□□ -1.02
PRPF8-209ENST00000573725 DISP2A7MBM2 1401 aa8.69□□□□□ -1.02
PRPF8-209ENST00000573725 PLEKHG3A1L390 1219 aa8.68□□□□□ -1.02
PRPF8-209ENST00000573725 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
PRPF8-209ENST00000573725 NBPF1Q3BBV0 1214 aa8.68□□□□□ -1.02
PRPF8-209ENST00000573725 NBPF8Q3BBV2 869 aa8.68□□□□□ -1.02
PRPF8-209ENST00000573725 TRPM1Q7Z4N2 1603 aa8.68□□□□□ -1.02
PRPF8-209ENST00000573725 PIK3C2AO00443 1686 aa8.68□□□□□ -1.02
PRPF8-209ENST00000573725 SSH2Q76I76 1423 aa8.67□□□□□ -1.02
PRPF8-209ENST00000573725 PEAK1Q9H792 1746 aa8.67□□□□□ -1.02
PRPF8-209ENST00000573725 STRN4Q9NRL3 753 aa8.67□□□□□ -1.02
PRPF8-209ENST00000573725 CCDC61Q9Y6R9 512 aa8.67□□□□□ -1.02
PRPF8-209ENST00000573725 USP19O94966 1318 aa8.66□□□□□ -1.02
PRPF8-209ENST00000573725 A0A0U1RQG5 324 aaPredicted RBP8.66□□□□□ -1.02
PRPF8-209ENST00000573725 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
PRPF8-209ENST00000573725 RGPD4Q7Z3J3 1758 aa8.66□□□□□ -1.02
PRPF8-209ENST00000573725 LRRC37A3O60309 1634 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 PPIP5K1Q6PFW1 1433 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 CPDO75976 1380 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 TRIM37O94972 964 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 EZH2Q15910 746 aaKnown RBP8.65□□□□□ -1.02
PRPF8-209ENST00000573725 LARP1Q6PKG0 1096 aaKnown RBP8.65□□□□□ -1.02
PRPF8-209ENST00000573725 FAM196AQ6ZSG2 479 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 ABTB2Q8N961 1025 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 CAMKK2Q96RR4 588 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 USP35Q9P2H5 1018 aa8.65□□□□□ -1.02
PRPF8-209ENST00000573725 COL5A2P05997 1499 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-209ENST00000573725 LTN1O94822 1766 aa8.64□□□□□ -1.03
PRPF8-209ENST00000573725 CENPJQ9HC77 1338 aaPredicted RBP8.64□□□□□ -1.03
PRPF8-209ENST00000573725 R3HDM1Q15032 1099 aaKnown RBP8.64□□□□□ -1.03
PRPF8-209ENST00000573725 BARGINQ6ZT62 677 aa8.64□□□□□ -1.03
PRPF8-209ENST00000573725 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
PRPF8-209ENST00000573725 SLIT3O75094 1523 aa8.64□□□□□ -1.03
PRPF8-209ENST00000573725 MON2Q7Z3U7 1717 aa8.63□□□□□ -1.03
PRPF8-209ENST00000573725 EVA1CP58658 441 aa8.63□□□□□ -1.03
PRPF8-209ENST00000573725 SRPK2P78362 688 aaKnown RBP8.63□□□□□ -1.03
PRPF8-209ENST00000573725 FAM43AQ8N2R8 423 aa8.63□□□□□ -1.03
PRPF8-209ENST00000573725 BRPF3Q9ULD4 1205 aa8.63□□□□□ -1.03
PRPF8-209ENST00000573725 USP6P35125 1406 aa8.63□□□□□ -1.03
PRPF8-209ENST00000573725 APBA3O96018 575 aa8.62□□□□□ -1.03
PRPF8-209ENST00000573725 GCP02774 474 aa8.62□□□□□ -1.03
PRPF8-209ENST00000573725 NLRP13Q86W25 1043 aa8.62□□□□□ -1.03
PRPF8-209ENST00000573725 TCP11L2Q8N4U5 519 aa8.62□□□□□ -1.03
PRPF8-209ENST00000573725 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-209ENST00000573725 PARD3Q8TEW0 1356 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 PDE3BQ13370 1112 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 IPO9Q96P70 1041 aaKnown RBP8.61□□□□□ -1.03
PRPF8-209ENST00000573725 CABP1Q9NZU7 370 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 USP54Q70EL1 1684 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 CRB1P82279 1406 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 CASZ1Q86V15 1759 aa8.61□□□□□ -1.03
PRPF8-209ENST00000573725 BRD4O60885 1362 aaPredicted RBP8.61□□□□□ -1.03
PRPF8-209ENST00000573725 THRAP3Q9Y2W1 955 aaKnown RBP8.6□□□□□ -1.03
PRPF8-209ENST00000573725 AATKQ6ZMQ8 1374 aa8.6□□□□□ -1.03
PRPF8-209ENST00000573725 NLRP6P59044 892 aa8.59□□□□□ -1.03
PRPF8-209ENST00000573725 NFAT5O94916 1531 aa8.59□□□□□ -1.03
PRPF8-209ENST00000573725 CHD4Q14839 1912 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 OVOS2A0A0G2JMS6 1433 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 OVOS2A0A0J9YW53 1432 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 OVOS2Q6IE36 1432 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 RRP9O43818 475 aaKnown RBP8.58□□□□□ -1.04
PRPF8-209ENST00000573725 SIN3AQ96ST3 1273 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 PPP4R2Q9NY27 417 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 AXIN2Q9Y2T1 843 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 RGPD2P0DJD1 1756 aa8.58□□□□□ -1.04
PRPF8-209ENST00000573725 EVC2Q86UK5 1308 aa8.57□□□□□ -1.04
PRPF8-209ENST00000573725 BTAF1O14981 1849 aa8.57□□□□□ -1.04
PRPF8-209ENST00000573725 CPSF1Q10570 1443 aaKnown RBP8.57□□□□□ -1.04
PRPF8-209ENST00000573725 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
PRPF8-209ENST00000573725 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
PRPF8-209ENST00000573725 ZBTB47Q9UFB7 747 aaPredicted RBP8.57□□□□□ -1.04
PRPF8-209ENST00000573725 TTC21BQ7Z4L5 1316 aa8.56□□□□□ -1.04
PRPF8-209ENST00000573725 NHSQ6T4R5 1651 aa8.56□□□□□ -1.04
PRPF8-209ENST00000573725 NEFMP07197 916 aa8.56□□□□□ -1.04
PRPF8-209ENST00000573725 ANP32AP39687 249 aaKnown RBP8.56□□□□□ -1.04
PRPF8-209ENST00000573725 TOM1L2Q6ZVM7 507 aa8.56□□□□□ -1.04
PRPF8-209ENST00000573725 ARHGEF25Q86VW2 580 aa8.56□□□□□ -1.04
PRPF8-209ENST00000573725 WDR17Q8IZU2 1322 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 ABCC6O95255 1503 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 DDB1Q16531 1140 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 TAF7LQ5H9L4 462 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 NBPF14Q5TI25 921 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 MARCH10Q8NA82 808 aaPredicted RBP8.55□□□□□ -1.04
PRPF8-209ENST00000573725 ROCK2O75116 1388 aaKnown RBP8.55□□□□□ -1.04
PRPF8-209ENST00000573725 MYOM1P52179 1685 aa8.55□□□□□ -1.04
PRPF8-209ENST00000573725 TUBGCP6Q96RT7 1819 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 CD163L1Q9NR16 1453 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 CCER2I3L3R5 266 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 PLSCR1O15162 318 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 SOX12O15370 315 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 KLHL34Q8N239 644 aa8.54□□□□□ -1.04
PRPF8-209ENST00000573725 ZNF692Q9BU19 519 aaPredicted RBP8.54□□□□□ -1.04
PRPF8-209ENST00000573725 BCL9O00512 1426 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms