RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SNX29-207ENST00000568949 WDR17Q8IZU2 1322 aa18.13■□□□□ 0.49
SNX29-207ENST00000568949 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
SNX29-207ENST00000568949 NBPF1Q3BBV0 1214 aa18.12■□□□□ 0.49
SNX29-207ENST00000568949 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
SNX29-207ENST00000568949 MARCH10Q8NA82 808 aaPredicted RBP18.12■□□□□ 0.49
SNX29-207ENST00000568949 CENPJQ9HC77 1338 aaPredicted RBP18.12■□□□□ 0.49
SNX29-207ENST00000568949 PTGER2P43116 358 aa18.11■□□□□ 0.49
SNX29-207ENST00000568949 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
SNX29-207ENST00000568949 AKAP12Q02952 1782 aa18.1■□□□□ 0.49
SNX29-207ENST00000568949 ZBTB7AO95365 584 aa18.1■□□□□ 0.49
SNX29-207ENST00000568949 CABP1Q9NZU7 370 aa18.1■□□□□ 0.49
SNX29-207ENST00000568949 MYOM1P52179 1685 aa18.09■□□□□ 0.49
SNX29-207ENST00000568949 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
SNX29-207ENST00000568949 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
SNX29-207ENST00000568949 TXNRD1Q16881 649 aa18.08■□□□□ 0.48
SNX29-207ENST00000568949 ZNF784Q8NCA9 323 aaPredicted RBP18.08■□□□□ 0.48
SNX29-207ENST00000568949 CARD10Q9BWT7 1032 aa18.08■□□□□ 0.48
SNX29-207ENST00000568949 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
SNX29-207ENST00000568949 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
SNX29-207ENST00000568949 SLC15A2Q16348 729 aa18.07■□□□□ 0.48
SNX29-207ENST00000568949 ARHGEF25Q86VW2 580 aa18.07■□□□□ 0.48
SNX29-207ENST00000568949 ATF5Q9Y2D1 282 aaPredicted RBP18.07■□□□□ 0.48
SNX29-207ENST00000568949 QRICH2Q9H0J4 1663 aa18.06■□□□□ 0.48
SNX29-207ENST00000568949 KCNH5Q8NCM2 988 aa18.06■□□□□ 0.48
SNX29-207ENST00000568949 EXOC5O00471 708 aa18.05■□□□□ 0.48
SNX29-207ENST00000568949 SYT17Q9BSW7 474 aa18.05■□□□□ 0.48
SNX29-207ENST00000568949 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
SNX29-207ENST00000568949 CHD4Q14839 1912 aa18.04■□□□□ 0.48
SNX29-207ENST00000568949 CSB-PGBD3P0DP91 1061 aa18.04■□□□□ 0.48
SNX29-207ENST00000568949 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
SNX29-207ENST00000568949 RGPD5Q99666 1765 aa18.04■□□□□ 0.48
SNX29-207ENST00000568949 SGIP1Q9BQI5 828 aa18.03■□□□□ 0.48
SNX29-207ENST00000568949 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
SNX29-207ENST00000568949 CCDC7Q96M83 1385 aa18.03■□□□□ 0.48
SNX29-207ENST00000568949 TTC21BQ7Z4L5 1316 aa18.02■□□□□ 0.48
SNX29-207ENST00000568949 EVC2Q86UK5 1308 aa18.02■□□□□ 0.48
SNX29-207ENST00000568949 TTC21AQ8NDW8 1320 aa18.01■□□□□ 0.47
SNX29-207ENST00000568949 TNS2Q63HR2 1409 aa18■□□□□ 0.47
SNX29-207ENST00000568949 ABCC6O95255 1503 aa18■□□□□ 0.47
SNX29-207ENST00000568949 TRPM1Q7Z4N2 1603 aa18■□□□□ 0.47
SNX29-207ENST00000568949 NHSQ6T4R5 1651 aa17.99■□□□□ 0.47
SNX29-207ENST00000568949 MAP3K5Q99683 1374 aa17.99■□□□□ 0.47
SNX29-207ENST00000568949 NFAT5O94916 1531 aa17.98■□□□□ 0.47
SNX29-207ENST00000568949 ARXQ96QS3 562 aa17.98■□□□□ 0.47
SNX29-207ENST00000568949 SOX12O15370 315 aa17.97■□□□□ 0.47
SNX29-207ENST00000568949 C1QTNF8P60827 252 aa17.96■□□□□ 0.47
SNX29-207ENST00000568949 PAPPAQ13219 1627 aa17.96■□□□□ 0.47
SNX29-207ENST00000568949 SENP3-EIF4A1A0A087X0R7 540 aa17.94■□□□□ 0.46
SNX29-207ENST00000568949 ACSBG1Q96GR2 724 aa17.93■□□□□ 0.46
SNX29-207ENST00000568949 KAT6BQ8WYB5 2073 aa17.93■□□□□ 0.46
SNX29-207ENST00000568949 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
SNX29-207ENST00000568949 BTAF1O14981 1849 aa17.92■□□□□ 0.46
SNX29-207ENST00000568949 ERBB3P21860 1342 aa17.92■□□□□ 0.46
SNX29-207ENST00000568949 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
SNX29-207ENST00000568949 IL2RBP14784 551 aa17.91■□□□□ 0.46
SNX29-207ENST00000568949 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
SNX29-207ENST00000568949 NLRP2Q9NX02 1062 aa17.91■□□□□ 0.46
SNX29-207ENST00000568949 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
SNX29-207ENST00000568949 MON2Q7Z3U7 1717 aa17.89■□□□□ 0.46
SNX29-207ENST00000568949 GPR162Q16538 588 aa17.89■□□□□ 0.45
SNX29-207ENST00000568949 L3MBTL2Q969R5 705 aa17.89■□□□□ 0.45
SNX29-207ENST00000568949 LRRC4BQ9NT99 713 aa17.89■□□□□ 0.45
SNX29-207ENST00000568949 USP54Q70EL1 1684 aa17.89■□□□□ 0.45
SNX29-207ENST00000568949 AKT1S1Q96B36 256 aa17.88■□□□□ 0.45
SNX29-207ENST00000568949 UTRNP46939 3433 aa17.88■□□□□ 0.45
SNX29-207ENST00000568949 QSER1Q2KHR3 1735 aa17.88■□□□□ 0.45
SNX29-207ENST00000568949 SLC27A3Q5K4L6 730 aa17.87■□□□□ 0.45
SNX29-207ENST00000568949 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
SNX29-207ENST00000568949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.86■□□□□ 0.45
SNX29-207ENST00000568949 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
SNX29-207ENST00000568949 LTN1O94822 1766 aa17.86■□□□□ 0.45
SNX29-207ENST00000568949 POLD1P28340 1107 aa17.85■□□□□ 0.45
SNX29-207ENST00000568949 ANKRD24Q8TF21 1146 aa17.85■□□□□ 0.45
SNX29-207ENST00000568949 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
SNX29-207ENST00000568949 NME9Q86XW9 330 aa17.83■□□□□ 0.44
SNX29-207ENST00000568949 SBNO2Q9Y2G9 1366 aa17.82■□□□□ 0.44
SNX29-207ENST00000568949 PNPLA7Q6ZV29 1317 aa17.82■□□□□ 0.44
SNX29-207ENST00000568949 KLHL34Q8N239 644 aa17.81■□□□□ 0.44
SNX29-207ENST00000568949 CD163L1Q9NR16 1453 aa17.81■□□□□ 0.44
SNX29-207ENST00000568949 HDGFL2Q7Z4V5 671 aaPredicted RBP17.79■□□□□ 0.44
SNX29-207ENST00000568949 DDX54Q8TDD1 881 aaKnown RBP17.79■□□□□ 0.44
SNX29-207ENST00000568949 TFCP2L1Q9NZI6 479 aa17.79■□□□□ 0.44
SNX29-207ENST00000568949 EDC4Q6P2E9 1401 aaKnown RBP17.79■□□□□ 0.44
SNX29-207ENST00000568949 TUBGCP6Q96RT7 1819 aa17.79■□□□□ 0.44
SNX29-207ENST00000568949 FAM208AQ9UK61 1670 aaKnown RBP17.78■□□□□ 0.44
SNX29-207ENST00000568949 IFFO2Q5TF58 517 aa17.78■□□□□ 0.44
SNX29-207ENST00000568949 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
SNX29-207ENST00000568949 IP6K1Q92551 441 aa17.78■□□□□ 0.44
SNX29-207ENST00000568949 GRIN3BO60391 1043 aa17.77■□□□□ 0.44
SNX29-207ENST00000568949 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
SNX29-207ENST00000568949 LY75O60449 1722 aa17.77■□□□□ 0.44
SNX29-207ENST00000568949 SHANK3Q9BYB0 1731 aa17.77■□□□□ 0.44
SNX29-207ENST00000568949 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.43
SNX29-207ENST00000568949 PRIM1P49642 420 aaKnown RBP17.76■□□□□ 0.43
SNX29-207ENST00000568949 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
SNX29-207ENST00000568949 SIN3AQ96ST3 1273 aa17.75■□□□□ 0.43
SNX29-207ENST00000568949 SLC12A5Q9H2X9 1139 aa17.75■□□□□ 0.43
SNX29-207ENST00000568949 TERF2IPQ9NYB0 399 aa17.75■□□□□ 0.43
SNX29-207ENST00000568949 KCNQ4P56696 695 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms