RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 NECTIN2Q92692 538 aa24.28■■□□□ 1.48
AC009041.2-204ENST00000568394 C16orf71Q8IYS4 520 aaPredicted RBP24.28■■□□□ 1.48
AC009041.2-204ENST00000568394 ERVK-7P63135 1459 aa24.27■■□□□ 1.48
AC009041.2-204ENST00000568394 SPDYE4A6NLX3 237 aa24.27■■□□□ 1.48
AC009041.2-204ENST00000568394 PRKAR2BP31323 418 aa24.27■■□□□ 1.48
AC009041.2-204ENST00000568394 CCDC39Q9UFE4 941 aa24.27■■□□□ 1.48
AC009041.2-204ENST00000568394 LMBRD1Q9NUN5 540 aa24.27■■□□□ 1.48
AC009041.2-204ENST00000568394 NSFL1CQ9UNZ2 370 aaKnown RBP24.26■■□□□ 1.47
AC009041.2-204ENST00000568394 KIAA2012Q0VF49 1180 aa24.26■■□□□ 1.47
AC009041.2-204ENST00000568394 SASS6Q6UVJ0 657 aa24.26■■□□□ 1.47
AC009041.2-204ENST00000568394 FYB1O15117 783 aa24.25■■□□□ 1.47
AC009041.2-204ENST00000568394 POLR3AO14802 1390 aaPredicted RBP24.25■■□□□ 1.47
AC009041.2-204ENST00000568394 HDGFL2Q7Z4V5 671 aaPredicted RBP24.25■■□□□ 1.47
AC009041.2-204ENST00000568394 MIS18AQ9NYP9 233 aa24.25■■□□□ 1.47
AC009041.2-204ENST00000568394 ST18O60284 1047 aa24.25■■□□□ 1.47
AC009041.2-204ENST00000568394 TMEM63CQ9P1W3 806 aa24.24■■□□□ 1.47
AC009041.2-204ENST00000568394 GPT2Q8TD30 523 aa24.24■■□□□ 1.47
AC009041.2-204ENST00000568394 IQGAP3Q86VI3 1631 aa24.23■■□□□ 1.47
AC009041.2-204ENST00000568394 DYNC1I1O14576 645 aa24.23■■□□□ 1.47
AC009041.2-204ENST00000568394 TERF2IPQ9NYB0 399 aa24.22■■□□□ 1.47
AC009041.2-204ENST00000568394 SMARCA5O60264 1052 aaPredicted RBP24.22■■□□□ 1.47
AC009041.2-204ENST00000568394 RABEP1Q15276 862 aa24.22■■□□□ 1.47
AC009041.2-204ENST00000568394 LMOD2Q6P5Q4 547 aa24.22■■□□□ 1.47
AC009041.2-204ENST00000568394 ATAD2Q6PL18 1390 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 ZNF445P59923 1031 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 KRT24Q2M2I5 525 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 UNC13BO14795 1591 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 AK9Q5TCS8 1911 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 PHACTR3Q96KR7 559 aa24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.21■■□□□ 1.47
AC009041.2-204ENST00000568394 CASC1Q6TDU7 716 aa24.2■■□□□ 1.47
AC009041.2-204ENST00000568394 TTC12Q9H892 705 aaPredicted RBP24.2■■□□□ 1.47
AC009041.2-204ENST00000568394 DIAPH1O60610 1272 aaKnown RBP24.2■■□□□ 1.46
AC009041.2-204ENST00000568394 NEK4P51957 841 aa24.19■■□□□ 1.46
AC009041.2-204ENST00000568394 ZNF518AQ6AHZ1 1483 aa24.19■■□□□ 1.46
AC009041.2-204ENST00000568394 A0A1W2PP64 1363 aa24.19■■□□□ 1.46
AC009041.2-204ENST00000568394 OTUD7AQ8TE49 926 aaPredicted RBP24.18■■□□□ 1.46
AC009041.2-204ENST00000568394 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.18■■□□□ 1.46
AC009041.2-204ENST00000568394 USP25Q9UHP3 1055 aa24.18■■□□□ 1.46
AC009041.2-204ENST00000568394 ZNF500O60304 480 aaPredicted RBP24.18■■□□□ 1.46
AC009041.2-204ENST00000568394 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
AC009041.2-204ENST00000568394 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 LRSAM1Q6UWE0 723 aa24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 NPC1L1Q9UHC9 1359 aa24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 GCC1Q96CN9 775 aa24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 TRIM35Q9UPQ4 493 aa24.17■■□□□ 1.46
AC009041.2-204ENST00000568394 DTNBO60941 627 aa24.16■■□□□ 1.46
AC009041.2-204ENST00000568394 MTERF4Q7Z6M4 381 aaKnown RBP24.16■■□□□ 1.46
AC009041.2-204ENST00000568394 TSPY26PQ9H489 355 aa24.16■■□□□ 1.46
AC009041.2-204ENST00000568394 PTPRTO14522 1441 aa24.16■■□□□ 1.46
AC009041.2-204ENST00000568394 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
AC009041.2-204ENST00000568394 SMAP1Q8IYB5 467 aaPredicted RBP24.15■■□□□ 1.46
AC009041.2-204ENST00000568394 ZMYM3Q14202 1370 aa24.14■■□□□ 1.46
AC009041.2-204ENST00000568394 GSPT1P15170 499 aaKnown RBP24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 MAPK8IP2Q13387 824 aaPredicted RBP24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 CCDC27Q2M243 656 aa24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 TSPYL6Q8N831 410 aa24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 EIF2AK4Q9P2K8 1649 aaKnown RBP24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 NCOA3Q9Y6Q9 1424 aa24.14■■□□□ 1.45
AC009041.2-204ENST00000568394 TRPM2O94759 1503 aa24.13■■□□□ 1.45
AC009041.2-204ENST00000568394 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
AC009041.2-204ENST00000568394 PLXNC1O60486 1568 aa24.13■■□□□ 1.45
AC009041.2-204ENST00000568394 INTS3Q68E01 1043 aaKnown RBP24.13■■□□□ 1.45
AC009041.2-204ENST00000568394 TSHZ3Q63HK5 1081 aa24.12■■□□□ 1.45
AC009041.2-204ENST00000568394 SPC24Q8NBT2 197 aa24.12■■□□□ 1.45
AC009041.2-204ENST00000568394 CCDC94Q9BW85 323 aaPredicted RBP24.12■■□□□ 1.45
AC009041.2-204ENST00000568394 HS1BP3Q53T59 392 aa24.11■■□□□ 1.45
AC009041.2-204ENST00000568394 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
AC009041.2-204ENST00000568394 CHMP3Q9Y3E7 222 aa24.1■■□□□ 1.45
AC009041.2-204ENST00000568394 TERF1P54274 439 aa24.1■■□□□ 1.45
AC009041.2-204ENST00000568394 ZBTB7BO15156 539 aaPredicted RBP24.1■■□□□ 1.45
AC009041.2-204ENST00000568394 POGZQ7Z3K3 1410 aa24.1■■□□□ 1.45
AC009041.2-204ENST00000568394 CT47B1P0C2W7 299 aaPredicted RBP24.09■■□□□ 1.45
AC009041.2-204ENST00000568394 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
AC009041.2-204ENST00000568394 UHRF1BP1LA0JNW5 1464 aa24.09■■□□□ 1.45
AC009041.2-204ENST00000568394 CEP152O94986 1710 aa24.09■■□□□ 1.45
AC009041.2-204ENST00000568394 SYNMO15061 1565 aa24.09■■□□□ 1.45
AC009041.2-204ENST00000568394 MCM10Q7L590 875 aa24.08■■□□□ 1.45
AC009041.2-204ENST00000568394 LARP6Q9BRS8 491 aaKnown RBP24.08■■□□□ 1.45
AC009041.2-204ENST00000568394 SIRT2Q8IXJ6 389 aa24.08■■□□□ 1.44
AC009041.2-204ENST00000568394 UPF3BQ9BZI7 483 aaKnown RBP24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 PLEKHM2Q8IWE5 1019 aa24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 SYAP1Q96A49 352 aaPredicted RBP24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 PDLIM2Q96JY6 352 aa24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 USP26Q9BXU7 913 aa24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 ZNF771Q7L3S4 317 aaPredicted RBP24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 RILPL2Q969X0 211 aa24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 CWC22Q9HCG8 908 aaKnown RBP24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 SLC52A1Q9NWF4 448 aa24.07■■□□□ 1.44
AC009041.2-204ENST00000568394 TRIM6-TRIM34B2RNG4 842 aa24.06■■□□□ 1.44
AC009041.2-204ENST00000568394 CHAF1AQ13111 956 aaPredicted RBP24.06■■□□□ 1.44
AC009041.2-204ENST00000568394 SLC4A10Q6U841 1118 aa24.06■■□□□ 1.44
AC009041.2-204ENST00000568394 NOLC1Q14978 699 aaKnown RBP eCLIP24.06■■□□□ 1.44
AC009041.2-204ENST00000568394 KIF3AQ9Y496 699 aa24.06■■□□□ 1.44
AC009041.2-204ENST00000568394 SDSP20132 328 aa24.05■■□□□ 1.44
AC009041.2-204ENST00000568394 CHMP4BQ9H444 224 aaKnown RBP24.05■■□□□ 1.44
AC009041.2-204ENST00000568394 ZDHHC9Q9Y397 364 aa24.05■■□□□ 1.44
AC009041.2-204ENST00000568394 ANO2Q9NQ90 1003 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms