RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
CFDP1-207ENST00000566901 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
CFDP1-207ENST00000566901 MTHFSP49914 203 aa16.74■□□□□ 0.27
CFDP1-207ENST00000566901 PSME1Q06323 249 aa16.74■□□□□ 0.27
CFDP1-207ENST00000566901 FAM9BQ8IZU0 186 aa16.74■□□□□ 0.27
CFDP1-207ENST00000566901 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
CFDP1-207ENST00000566901 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
CFDP1-207ENST00000566901 PXDNQ92626 1479 aa16.73■□□□□ 0.27
CFDP1-207ENST00000566901 SLIT3O75094 1523 aa16.72■□□□□ 0.27
CFDP1-207ENST00000566901 CENPBP07199 599 aaPredicted RBP16.72■□□□□ 0.27
CFDP1-207ENST00000566901 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
CFDP1-207ENST00000566901 ZRANB1Q9UGI0 708 aa16.72■□□□□ 0.27
CFDP1-207ENST00000566901 MAP2P11137 1827 aaKnown RBP16.71■□□□□ 0.27
CFDP1-207ENST00000566901 FOXO3O43524 673 aa16.71■□□□□ 0.27
CFDP1-207ENST00000566901 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
CFDP1-207ENST00000566901 ZNF219Q9P2Y4 722 aaPredicted RBP16.71■□□□□ 0.27
CFDP1-207ENST00000566901 POLKQ9UBT6 870 aa16.71■□□□□ 0.27
CFDP1-207ENST00000566901 ATRNO75882 1429 aa16.7■□□□□ 0.26
CFDP1-207ENST00000566901 KRT28Q7Z3Y7 464 aa16.7■□□□□ 0.26
CFDP1-207ENST00000566901 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
CFDP1-207ENST00000566901 NFAT5O94916 1531 aa16.7■□□□□ 0.26
CFDP1-207ENST00000566901 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
CFDP1-207ENST00000566901 USP19O94966 1318 aa16.7■□□□□ 0.26
CFDP1-207ENST00000566901 NLRP6P59044 892 aa16.69■□□□□ 0.26
CFDP1-207ENST00000566901 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
CFDP1-207ENST00000566901 RTL1A6NKG5 1358 aa16.68■□□□□ 0.26
CFDP1-207ENST00000566901 HAP1P54257 671 aaPredicted RBP16.68■□□□□ 0.26
CFDP1-207ENST00000566901 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
CFDP1-207ENST00000566901 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
CFDP1-207ENST00000566901 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
CFDP1-207ENST00000566901 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
CFDP1-207ENST00000566901 HNRNPUQ00839 825 aaKnown RBP eCLIP16.67■□□□□ 0.26
CFDP1-207ENST00000566901 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
CFDP1-207ENST00000566901 NUDCQ9Y266 331 aa16.67■□□□□ 0.26
CFDP1-207ENST00000566901 KCNH5Q8NCM2 988 aa16.66■□□□□ 0.26
CFDP1-207ENST00000566901 PEAK1Q9H792 1746 aa16.66■□□□□ 0.26
CFDP1-207ENST00000566901 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
CFDP1-207ENST00000566901 FLT4P35916 1363 aa16.65■□□□□ 0.26
CFDP1-207ENST00000566901 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.65■□□□□ 0.26
CFDP1-207ENST00000566901 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
CFDP1-207ENST00000566901 EMILIN1Q9Y6C2 1016 aa16.65■□□□□ 0.26
CFDP1-207ENST00000566901 EP400Q96L91 3159 aa16.65■□□□□ 0.26
CFDP1-207ENST00000566901 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
CFDP1-207ENST00000566901 CRYBG1Q9Y4K1 1723 aa16.64■□□□□ 0.25
CFDP1-207ENST00000566901 ABCC6O95255 1503 aa16.64■□□□□ 0.25
CFDP1-207ENST00000566901 SPATA31A3Q5VYP0 1347 aa16.64■□□□□ 0.25
CFDP1-207ENST00000566901 ABCB7O75027 752 aa16.63■□□□□ 0.25
CFDP1-207ENST00000566901 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
CFDP1-207ENST00000566901 MAP3K19Q56UN5 1328 aa16.63■□□□□ 0.25
CFDP1-207ENST00000566901 BCL9LQ86UU0 1499 aa16.62■□□□□ 0.25
CFDP1-207ENST00000566901 RRS1Q15050 365 aaKnown RBP16.62■□□□□ 0.25
CFDP1-207ENST00000566901 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
CFDP1-207ENST00000566901 GJD4Q96KN9 370 aaPredicted RBP16.61■□□□□ 0.25
CFDP1-207ENST00000566901 LTN1O94822 1766 aa16.61■□□□□ 0.25
CFDP1-207ENST00000566901 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
CFDP1-207ENST00000566901 SRCAPQ6ZRS2 3230 aa16.6■□□□□ 0.25
CFDP1-207ENST00000566901 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
CFDP1-207ENST00000566901 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
CFDP1-207ENST00000566901 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
CFDP1-207ENST00000566901 FBLN1P23142 703 aa16.59■□□□□ 0.25
CFDP1-207ENST00000566901 IL13P35225 146 aa16.59■□□□□ 0.25
CFDP1-207ENST00000566901 UNC5CLQ8IV45 518 aa16.59■□□□□ 0.25
CFDP1-207ENST00000566901 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
CFDP1-207ENST00000566901 GCP02774 474 aa16.58■□□□□ 0.24
CFDP1-207ENST00000566901 NUTM2GQ5VZR2 741 aa16.58■□□□□ 0.24
CFDP1-207ENST00000566901 GLI3P10071 1580 aa16.58■□□□□ 0.24
CFDP1-207ENST00000566901 ABCA3Q99758 1704 aa16.57■□□□□ 0.24
CFDP1-207ENST00000566901 A0A0G2JS52 829 aa16.57■□□□□ 0.24
CFDP1-207ENST00000566901 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
CFDP1-207ENST00000566901 U2AF1L5P0DN76 240 aaPredicted RBP16.57■□□□□ 0.24
CFDP1-207ENST00000566901 U2AF1Q01081 240 aaKnown RBP eCLIP16.57■□□□□ 0.24
CFDP1-207ENST00000566901 MYT1Q01538 1121 aa16.57■□□□□ 0.24
CFDP1-207ENST00000566901 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
CFDP1-207ENST00000566901 CPDO75976 1380 aa16.56■□□□□ 0.24
CFDP1-207ENST00000566901 FCHSD2O94868 740 aa16.56■□□□□ 0.24
CFDP1-207ENST00000566901 AMPHP49418 695 aa16.56■□□□□ 0.24
CFDP1-207ENST00000566901 SF3B2Q13435 895 aaKnown RBP16.56■□□□□ 0.24
CFDP1-207ENST00000566901 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
CFDP1-207ENST00000566901 CCDC125Q86Z20 511 aa16.56■□□□□ 0.24
CFDP1-207ENST00000566901 SLIT2O94813 1529 aa16.55■□□□□ 0.24
CFDP1-207ENST00000566901 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
CFDP1-207ENST00000566901 HOXC9P31274 260 aa16.55■□□□□ 0.24
CFDP1-207ENST00000566901 EIF4A2Q14240 407 aaKnown RBP16.55■□□□□ 0.24
CFDP1-207ENST00000566901 IP6K1Q92551 441 aa16.55■□□□□ 0.24
CFDP1-207ENST00000566901 NWD2Q9ULI1 1742 aa16.55■□□□□ 0.24
CFDP1-207ENST00000566901 PDE3BQ13370 1112 aa16.54■□□□□ 0.24
CFDP1-207ENST00000566901 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
CFDP1-207ENST00000566901 SOX12O15370 315 aa16.53■□□□□ 0.24
CFDP1-207ENST00000566901 HSP90AB2PQ58FF8 381 aa16.53■□□□□ 0.24
CFDP1-207ENST00000566901 KDRP35968 1356 aa16.52■□□□□ 0.24
CFDP1-207ENST00000566901 PLEKHF1Q96S99 279 aa16.52■□□□□ 0.24
CFDP1-207ENST00000566901 RSPH6AQ9H0K4 717 aa16.52■□□□□ 0.24
CFDP1-207ENST00000566901 CAMTA1Q9Y6Y1 1673 aa16.52■□□□□ 0.23
CFDP1-207ENST00000566901 IGSF1Q8N6C5 1336 aa16.51■□□□□ 0.23
CFDP1-207ENST00000566901 ZNF521Q96K83 1311 aa16.51■□□□□ 0.23
CFDP1-207ENST00000566901 SEPT12Q8IYM1 358 aa16.51■□□□□ 0.23
CFDP1-207ENST00000566901 NCAPD2Q15021 1401 aa16.51■□□□□ 0.23
CFDP1-207ENST00000566901 COL18A1P39060 1754 aa16.51■□□□□ 0.23
CFDP1-207ENST00000566901 FAM208AQ9UK61 1670 aaKnown RBP16.5■□□□□ 0.23
CFDP1-207ENST00000566901 CCDC27Q2M243 656 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms