RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 PDGFDQ9GZP0 370 aaPredicted RBP22.88■■□□□ 1.25
EDC3-210ENST00000566219 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
EDC3-210ENST00000566219 BCL11BQ9C0K0 894 aaPredicted RBP22.87■■□□□ 1.25
EDC3-210ENST00000566219 BRD4O60885 1362 aaPredicted RBP22.87■■□□□ 1.25
EDC3-210ENST00000566219 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
EDC3-210ENST00000566219 CENPJQ9HC77 1338 aaPredicted RBP22.86■■□□□ 1.25
EDC3-210ENST00000566219 ZBTB7AO95365 584 aa22.86■■□□□ 1.25
EDC3-210ENST00000566219 NLRP6P59044 892 aa22.86■■□□□ 1.25
EDC3-210ENST00000566219 NBPF1Q3BBV0 1214 aa22.86■■□□□ 1.25
EDC3-210ENST00000566219 CPSF1Q10570 1443 aaKnown RBP22.83■■□□□ 1.25
EDC3-210ENST00000566219 WDR17Q8IZU2 1322 aa22.82■■□□□ 1.24
EDC3-210ENST00000566219 MARCH10Q8NA82 808 aaPredicted RBP22.82■■□□□ 1.24
EDC3-210ENST00000566219 TRIM26Q12899 539 aaPredicted RBP22.81■■□□□ 1.24
EDC3-210ENST00000566219 PROM2Q8N271 834 aa22.81■■□□□ 1.24
EDC3-210ENST00000566219 CABP1Q9NZU7 370 aa22.81■■□□□ 1.24
EDC3-210ENST00000566219 BCL9O00512 1426 aa22.81■■□□□ 1.24
EDC3-210ENST00000566219 PTGER2P43116 358 aa22.8■■□□□ 1.24
EDC3-210ENST00000566219 ATF5Q9Y2D1 282 aaPredicted RBP22.8■■□□□ 1.24
EDC3-210ENST00000566219 AXIN2Q9Y2T1 843 aa22.8■■□□□ 1.24
EDC3-210ENST00000566219 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
EDC3-210ENST00000566219 NHSQ6T4R5 1651 aa22.77■■□□□ 1.24
EDC3-210ENST00000566219 SOX12O15370 315 aa22.77■■□□□ 1.24
EDC3-210ENST00000566219 TXNRD1Q16881 649 aa22.77■■□□□ 1.24
EDC3-210ENST00000566219 CDCA7Q9BWT1 371 aaPredicted RBP22.77■■□□□ 1.24
EDC3-210ENST00000566219 TRPM1Q7Z4N2 1603 aa22.77■■□□□ 1.24
EDC3-210ENST00000566219 UTRNP46939 3433 aa22.76■■□□□ 1.23
EDC3-210ENST00000566219 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
EDC3-210ENST00000566219 ZNF784Q8NCA9 323 aaPredicted RBP22.76■■□□□ 1.23
EDC3-210ENST00000566219 TNS2Q63HR2 1409 aa22.75■■□□□ 1.23
EDC3-210ENST00000566219 CHD4Q14839 1912 aa22.75■■□□□ 1.23
EDC3-210ENST00000566219 FHDC1Q9C0D6 1143 aaPredicted RBP22.75■■□□□ 1.23
EDC3-210ENST00000566219 NFAT5O94916 1531 aa22.74■■□□□ 1.23
EDC3-210ENST00000566219 SLC15A2Q16348 729 aa22.74■■□□□ 1.23
EDC3-210ENST00000566219 ARHGEF25Q86VW2 580 aa22.73■■□□□ 1.23
EDC3-210ENST00000566219 CARD10Q9BWT7 1032 aa22.73■■□□□ 1.23
EDC3-210ENST00000566219 PAPPAQ13219 1627 aa22.72■■□□□ 1.23
EDC3-210ENST00000566219 SYT17Q9BSW7 474 aa22.71■■□□□ 1.23
EDC3-210ENST00000566219 TTC21BQ7Z4L5 1316 aa22.71■■□□□ 1.23
EDC3-210ENST00000566219 ABCC6O95255 1503 aa22.71■■□□□ 1.23
EDC3-210ENST00000566219 KCNH5Q8NCM2 988 aa22.7■■□□□ 1.22
EDC3-210ENST00000566219 MTFR1LQ9H019 292 aa22.7■■□□□ 1.22
EDC3-210ENST00000566219 CCDC7Q96M83 1385 aa22.7■■□□□ 1.22
EDC3-210ENST00000566219 EVC2Q86UK5 1308 aa22.69■■□□□ 1.22
EDC3-210ENST00000566219 EXOC5O00471 708 aa22.69■■□□□ 1.22
EDC3-210ENST00000566219 BTAF1O14981 1849 aa22.68■■□□□ 1.22
EDC3-210ENST00000566219 SGIP1Q9BQI5 828 aa22.68■■□□□ 1.22
EDC3-210ENST00000566219 MON2Q7Z3U7 1717 aa22.67■■□□□ 1.22
EDC3-210ENST00000566219 ACSBG1Q96GR2 724 aa22.66■■□□□ 1.22
EDC3-210ENST00000566219 TTC21AQ8NDW8 1320 aa22.65■■□□□ 1.22
EDC3-210ENST00000566219 SENP3-EIF4A1A0A087X0R7 540 aa22.65■■□□□ 1.22
EDC3-210ENST00000566219 LTN1O94822 1766 aa22.65■■□□□ 1.22
EDC3-210ENST00000566219 ARXQ96QS3 562 aa22.63■■□□□ 1.21
EDC3-210ENST00000566219 USP54Q70EL1 1684 aa22.62■■□□□ 1.21
EDC3-210ENST00000566219 ZNF692Q9BU19 519 aaPredicted RBP22.62■■□□□ 1.21
EDC3-210ENST00000566219 KTN1Q86UP2 1357 aaKnown RBP22.62■■□□□ 1.21
EDC3-210ENST00000566219 MAP3K5Q99683 1374 aa22.61■■□□□ 1.21
EDC3-210ENST00000566219 KAT6BQ8WYB5 2073 aa22.61■■□□□ 1.21
EDC3-210ENST00000566219 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
EDC3-210ENST00000566219 ERBB3P21860 1342 aa22.59■■□□□ 1.21
EDC3-210ENST00000566219 NLRP2Q9NX02 1062 aa22.59■■□□□ 1.21
EDC3-210ENST00000566219 QSER1Q2KHR3 1735 aa22.58■■□□□ 1.21
EDC3-210ENST00000566219 C1QTNF8P60827 252 aa22.58■■□□□ 1.21
EDC3-210ENST00000566219 TUBGCP6Q96RT7 1819 aa22.57■■□□□ 1.2
EDC3-210ENST00000566219 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
EDC3-210ENST00000566219 IL2RBP14784 551 aa22.56■■□□□ 1.2
EDC3-210ENST00000566219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.56■■□□□ 1.2
EDC3-210ENST00000566219 KLHL34Q8N239 644 aa22.56■■□□□ 1.2
EDC3-210ENST00000566219 L3MBTL2Q969R5 705 aa22.56■■□□□ 1.2
EDC3-210ENST00000566219 GPR162Q16538 588 aa22.54■■□□□ 1.2
EDC3-210ENST00000566219 LRRC4BQ9NT99 713 aa22.54■■□□□ 1.2
EDC3-210ENST00000566219 COL24A1Q17RW2 1714 aa22.54■■□□□ 1.2
EDC3-210ENST00000566219 USP31Q70CQ4 1352 aa22.53■■□□□ 1.2
EDC3-210ENST00000566219 NME9Q86XW9 330 aa22.52■■□□□ 1.2
EDC3-210ENST00000566219 GOLGB1Q14789 3259 aaKnown RBP22.51■■□□□ 1.19
EDC3-210ENST00000566219 ANKRD24Q8TF21 1146 aa22.51■■□□□ 1.19
EDC3-210ENST00000566219 CD163L1Q9NR16 1453 aa22.51■■□□□ 1.19
EDC3-210ENST00000566219 DOT1LQ8TEK3 1739 aa22.51■■□□□ 1.19
EDC3-210ENST00000566219 FAM208AQ9UK61 1670 aaKnown RBP22.5■■□□□ 1.19
EDC3-210ENST00000566219 PELP1Q8IZL8 1130 aaKnown RBP22.5■■□□□ 1.19
EDC3-210ENST00000566219 SBNO2Q9Y2G9 1366 aa22.5■■□□□ 1.19
EDC3-210ENST00000566219 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
EDC3-210ENST00000566219 AKT1S1Q96B36 256 aa22.49■■□□□ 1.19
EDC3-210ENST00000566219 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
EDC3-210ENST00000566219 GIGYF1O75420 1035 aaPredicted RBP22.47■■□□□ 1.19
EDC3-210ENST00000566219 POLD1P28340 1107 aa22.47■■□□□ 1.19
EDC3-210ENST00000566219 PNPLA7Q6ZV29 1317 aa22.47■■□□□ 1.19
EDC3-210ENST00000566219 LY75O60449 1722 aa22.46■■□□□ 1.19
EDC3-210ENST00000566219 SLC16A10Q8TF71 515 aa22.45■■□□□ 1.18
EDC3-210ENST00000566219 KCNQ4P56696 695 aa22.44■■□□□ 1.18
EDC3-210ENST00000566219 SLC27A3Q5K4L6 730 aa22.44■■□□□ 1.18
EDC3-210ENST00000566219 NLGN2Q8NFZ4 835 aa22.44■■□□□ 1.18
EDC3-210ENST00000566219 DDX54Q8TDD1 881 aaKnown RBP22.44■■□□□ 1.18
EDC3-210ENST00000566219 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
EDC3-210ENST00000566219 TMC1Q8TDI8 760 aa22.43■■□□□ 1.18
EDC3-210ENST00000566219 SIN3AQ96ST3 1273 aa22.43■■□□□ 1.18
EDC3-210ENST00000566219 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
EDC3-210ENST00000566219 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
EDC3-210ENST00000566219 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
EDC3-210ENST00000566219 HDGFL2Q7Z4V5 671 aaPredicted RBP22.41■■□□□ 1.18
EDC3-210ENST00000566219 LTV1Q96GA3 475 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms