RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 UBTFL1P0CB47 393 aaPredicted RBP15.12■□□□□ 0.01
COMMD4-209ENST00000564068 FMNL2Q96PY5 1086 aa15.12■□□□□ 0.01
COMMD4-209ENST00000564068 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
COMMD4-209ENST00000564068 KIF14Q15058 1648 aa15.12■□□□□ 0.01
COMMD4-209ENST00000564068 ADGRF5Q8IZF2 1346 aa15.12■□□□□ 0.01
COMMD4-209ENST00000564068 PRAM1Q96QH2 718 aa15.12■□□□□ 0.01
COMMD4-209ENST00000564068 FERMT3Q86UX7 667 aa15.11■□□□□ 0.01
COMMD4-209ENST00000564068 GNAI2P04899 355 aa15.11■□□□□ 0.01
COMMD4-209ENST00000564068 GAS2L3Q86XJ1 694 aa15.11■□□□□ 0.01
COMMD4-209ENST00000564068 CAMK4Q16566 473 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 TEX35Q5T0J7 233 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 RPAP2Q8IXW5 612 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-209ENST00000564068 SDF4Q9BRK5 362 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 LRRCC1Q9C099 1032 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 FAM177BA6PVY3 158 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 FCHSD2O94868 740 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 CCDC73Q6ZRK6 1079 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 MNS1Q8NEH6 495 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-209ENST00000564068 IGSF3O75054 1194 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 ADCY5O95622 1261 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 HCLS1P14317 486 aaPredicted RBP15.1■□□□□ 0.01
COMMD4-209ENST00000564068 MCM5P33992 734 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 LRSAM1Q6UWE0 723 aa15.1■□□□□ 0.01
COMMD4-209ENST00000564068 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
COMMD4-209ENST00000564068 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
COMMD4-209ENST00000564068 ERICH4A6NGS2 130 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 GNAI3P08754 354 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 TSHZ3Q63HK5 1081 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 FILIP1Q7Z7B0 1213 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 SULT6B1Q6IMI4 303 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 DDX54Q8TDD1 881 aaKnown RBP15.09■□□□□ 0.01
COMMD4-209ENST00000564068 ZNF428Q96B54 188 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 TNMDQ9H2S6 317 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 HDAC5Q9UQL6 1122 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 CFAP43Q8NDM7 1665 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 ALDH1L2Q3SY69 923 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 RNF20Q5VTR2 975 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 GOLGA6L1Q8N7Z2 621 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 RBSNQ9H1K0 784 aa15.09■□□□□ 0.01
COMMD4-209ENST00000564068 C16orf71Q8IYS4 520 aaPredicted RBP15.08■□□□□ 0.01
COMMD4-209ENST00000564068 CNTROBQ8N137 903 aa15.08■□□□□ 0.01
COMMD4-209ENST00000564068 CARD14Q9BXL6 1004 aa15.08■□□□□ 0.01
COMMD4-209ENST00000564068 LARP1BQ659C4 914 aaKnown RBP15.08■□□□□ 0
COMMD4-209ENST00000564068 STK3Q13188 491 aa15.08■□□□□ 0
COMMD4-209ENST00000564068 NFE2L2Q16236 605 aa15.08■□□□□ 0
COMMD4-209ENST00000564068 CGNQ9P2M7 1197 aaKnown RBP15.08■□□□□ 0
COMMD4-209ENST00000564068 POGZQ7Z3K3 1410 aa15.07■□□□□ 0
COMMD4-209ENST00000564068 C16orf45Q96MC5 204 aaPredicted RBP15.07■□□□□ 0
COMMD4-209ENST00000564068 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
COMMD4-209ENST00000564068 ADGRL1O94910 1474 aa15.07■□□□□ 0
COMMD4-209ENST00000564068 FBLN1P23142 703 aa15.07■□□□□ 0
COMMD4-209ENST00000564068 ZNF330Q9Y3S2 320 aaPredicted RBP15.07■□□□□ 0
COMMD4-209ENST00000564068 KRT85P78386 507 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 NOLC1Q14978 699 aaKnown RBP eCLIP15.06■□□□□ 0
COMMD4-209ENST00000564068 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
COMMD4-209ENST00000564068 CWC27Q6UX04 472 aaKnown RBP15.06■□□□□ 0
COMMD4-209ENST00000564068 TXNDC2Q86VQ3 553 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 CHMP4AQ9BY43 222 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 CCDC183Q5T5S1 534 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 CLASRPQ8N2M8 674 aaKnown RBP15.06■□□□□ 0
COMMD4-209ENST00000564068 TMX3Q96JJ7 454 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 ANTXR1Q9H6X2 564 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 ZBTB40Q9NUA8 1239 aa15.06■□□□□ 0
COMMD4-209ENST00000564068 ARGLU1Q9NWB6 273 aaPredicted RBP15.06■□□□□ 0
COMMD4-209ENST00000564068 PZPP20742 1482 aa15.05■□□□□ 0
COMMD4-209ENST00000564068 CEP170Q5SW79 1584 aa15.05■□□□□ 0
COMMD4-209ENST00000564068 FSD2A1L4K1 749 aa15.05■□□□□ 0
COMMD4-209ENST00000564068 NUP62CLQ9H1M0 184 aa15.05■□□□□ 0
COMMD4-209ENST00000564068 DISP1Q96F81 1524 aa15.05■□□□□ -0
COMMD4-209ENST00000564068 SDSP20132 328 aa15.05■□□□□ -0
COMMD4-209ENST00000564068 GPS2Q13227 327 aa15.05■□□□□ -0
COMMD4-209ENST00000564068 F6X3S4 739 aa15.05■□□□□ -0
COMMD4-209ENST00000564068 PDCP20941 246 aa15.05■□□□□ -0
COMMD4-209ENST00000564068 TCOF1Q13428 1488 aaKnown RBP15.05■□□□□ -0
COMMD4-209ENST00000564068 KIAA0556O60303 1618 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 TEFQ10587 303 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 NUTM1Q86Y26 1132 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 CCDC83Q8IWF9 413 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 CYP46A1Q9Y6A2 500 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 FANCAO15360 1455 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 G3BP1Q13283 466 aaKnown RBP eCLIP15.04■□□□□ -02e-6■□□□□ 9.5
COMMD4-209ENST00000564068 TTC22Q5TAA0 569 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 CDK19Q9BWU1 502 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
COMMD4-209ENST00000564068 SMC2O95347 1197 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 CKAP2LQ8IYA6 745 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 JAKMIP1Q96N16 626 aaKnown RBP15.04■□□□□ -0
COMMD4-209ENST00000564068 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
COMMD4-209ENST00000564068 RBM25P49756 843 aaKnown RBP15.03■□□□□ -0
COMMD4-209ENST00000564068 GIMAP6Q6P9H5 292 aa15.03■□□□□ -0
COMMD4-209ENST00000564068 NOL7Q9UMY1 257 aaKnown RBP15.03■□□□□ -0
COMMD4-209ENST00000564068 KINO60870 393 aaKnown RBP15.03■□□□□ -0
COMMD4-209ENST00000564068 DENND4BO75064 1496 aaPredicted RBP15.03■□□□□ -0
COMMD4-209ENST00000564068 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
COMMD4-209ENST00000564068 HSP90AB4PQ58FF6 505 aa15.03■□□□□ -0
COMMD4-209ENST00000564068 MAP3K11Q16584 847 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms