RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 RGPD1P0DJD0 1748 aa18.99■□□□□ 0.63
ZEB1-218ENST00000560196 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
ZEB1-218ENST00000560196 ARHGEF10O15013 1369 aa18.98■□□□□ 0.63
ZEB1-218ENST00000560196 NEFMP07197 916 aa18.98■□□□□ 0.63
ZEB1-218ENST00000560196 AMPHP49418 695 aa18.98■□□□□ 0.63
ZEB1-218ENST00000560196 FKBP8Q14318 412 aa18.98■□□□□ 0.63
ZEB1-218ENST00000560196 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
ZEB1-218ENST00000560196 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
ZEB1-218ENST00000560196 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
ZEB1-218ENST00000560196 NUTM2GQ5VZR2 741 aa18.97■□□□□ 0.63
ZEB1-218ENST00000560196 RCAN3Q9UKA8 241 aa18.97■□□□□ 0.63
ZEB1-218ENST00000560196 HOXC9P31274 260 aa18.96■□□□□ 0.63
ZEB1-218ENST00000560196 PXDNQ92626 1479 aa18.96■□□□□ 0.63
ZEB1-218ENST00000560196 SOX12O15370 315 aa18.95■□□□□ 0.62
ZEB1-218ENST00000560196 RRP7AQ9Y3A4 280 aaKnown RBP18.95■□□□□ 0.62
ZEB1-218ENST00000560196 XPCQ01831 940 aaPredicted RBP18.94■□□□□ 0.62
ZEB1-218ENST00000560196 NFE2L2Q16236 605 aa18.94■□□□□ 0.62
ZEB1-218ENST00000560196 BRINP3Q76B58 766 aa18.94■□□□□ 0.62
ZEB1-218ENST00000560196 IP6K1Q92551 441 aa18.94■□□□□ 0.62
ZEB1-218ENST00000560196 SLAIN2Q9P270 581 aa18.94■□□□□ 0.62
ZEB1-218ENST00000560196 IL16Q14005 1332 aa18.94■□□□□ 0.62
ZEB1-218ENST00000560196 HMOX1P09601 288 aa18.93■□□□□ 0.62
ZEB1-218ENST00000560196 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
ZEB1-218ENST00000560196 SPINK5Q9NQ38 1064 aaPredicted RBP18.93■□□□□ 0.62
ZEB1-218ENST00000560196 TRIM35Q9UPQ4 493 aa18.93■□□□□ 0.62
ZEB1-218ENST00000560196 IGSF1Q8N6C5 1336 aa18.93■□□□□ 0.62
ZEB1-218ENST00000560196 KDRP35968 1356 aa18.93■□□□□ 0.62
ZEB1-218ENST00000560196 TNS3Q68CZ2 1445 aa18.92■□□□□ 0.62
ZEB1-218ENST00000560196 GCP02774 474 aa18.92■□□□□ 0.62
ZEB1-218ENST00000560196 RIPK4P57078 832 aa18.92■□□□□ 0.62
ZEB1-218ENST00000560196 ARHGEF25Q86VW2 580 aa18.91■□□□□ 0.62
ZEB1-218ENST00000560196 LTN1O94822 1766 aa18.91■□□□□ 0.62
ZEB1-218ENST00000560196 SULT6B1Q6IMI4 303 aa18.9■□□□□ 0.62
ZEB1-218ENST00000560196 PHACTR3Q96KR7 559 aa18.9■□□□□ 0.62
ZEB1-218ENST00000560196 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
ZEB1-218ENST00000560196 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.62
ZEB1-218ENST00000560196 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
ZEB1-218ENST00000560196 RRP1P56182 461 aaKnown RBP18.88■□□□□ 0.61
ZEB1-218ENST00000560196 LMOD3Q0VAK6 560 aa18.88■□□□□ 0.61
ZEB1-218ENST00000560196 EYA1Q99502 592 aa18.88■□□□□ 0.61
ZEB1-218ENST00000560196 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
ZEB1-218ENST00000560196 LTBP4Q8N2S1 1624 aa18.88■□□□□ 0.61
ZEB1-218ENST00000560196 AEBP1Q8IUX7 1158 aa18.87■□□□□ 0.61
ZEB1-218ENST00000560196 ABCC6O95255 1503 aa18.86■□□□□ 0.61
ZEB1-218ENST00000560196 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
ZEB1-218ENST00000560196 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
ZEB1-218ENST00000560196 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
ZEB1-218ENST00000560196 CT47B1P0C2W7 299 aaPredicted RBP18.84■□□□□ 0.61
ZEB1-218ENST00000560196 NCAPD2Q15021 1401 aa18.83■□□□□ 0.61
ZEB1-218ENST00000560196 CRYBG1Q9Y4K1 1723 aa18.83■□□□□ 0.61
ZEB1-218ENST00000560196 NHSL1Q5SYE7 1610 aa18.83■□□□□ 0.61
ZEB1-218ENST00000560196 CPDO75976 1380 aa18.81■□□□□ 0.6
ZEB1-218ENST00000560196 IRX6P78412 446 aaPredicted RBP18.8■□□□□ 0.6
ZEB1-218ENST00000560196 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 DLG5Q8TDM6 1919 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.79■□□□□ 0.6
ZEB1-218ENST00000560196 GAS2L2Q8NHY3 880 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 IFT57Q9NWB7 429 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
ZEB1-218ENST00000560196 HTATSF1O43719 755 aaKnown RBP18.78■□□□□ 0.6
ZEB1-218ENST00000560196 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
ZEB1-218ENST00000560196 GNAI1P63096 354 aa18.77■□□□□ 0.6
ZEB1-218ENST00000560196 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
ZEB1-218ENST00000560196 COL18A1P39060 1754 aa18.77■□□□□ 0.6
ZEB1-218ENST00000560196 NBPF6Q5VWK0 638 aa18.76■□□□□ 0.59
ZEB1-218ENST00000560196 ANKRD24Q8TF21 1146 aa18.76■□□□□ 0.59
ZEB1-218ENST00000560196 NBPF4Q96M43 638 aa18.76■□□□□ 0.59
ZEB1-218ENST00000560196 MTHFSDQ2M296 383 aaKnown RBP18.75■□□□□ 0.59
ZEB1-218ENST00000560196 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
ZEB1-218ENST00000560196 LMO7Q8WWI1 1683 aa18.75■□□□□ 0.59
ZEB1-218ENST00000560196 AHDC1Q5TGY3 1603 aaPredicted RBP18.74■□□□□ 0.59
ZEB1-218ENST00000560196 ZBTB7CA1YPR0 619 aa18.74■□□□□ 0.59
ZEB1-218ENST00000560196 RARSP54136 660 aaKnown RBP18.74■□□□□ 0.59
ZEB1-218ENST00000560196 ZC3H6P61129 1189 aaKnown RBP18.74■□□□□ 0.59
ZEB1-218ENST00000560196 TSR2Q969E8 191 aaKnown RBP18.74■□□□□ 0.59
ZEB1-218ENST00000560196 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
ZEB1-218ENST00000560196 ERBB3P21860 1342 aa18.74■□□□□ 0.59
ZEB1-218ENST00000560196 PLEKHG2Q9H7P9 1386 aa18.73■□□□□ 0.59
ZEB1-218ENST00000560196 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
ZEB1-218ENST00000560196 ZNF428Q96B54 188 aa18.72■□□□□ 0.59
ZEB1-218ENST00000560196 FAM208AQ9UK61 1670 aaKnown RBP18.71■□□□□ 0.59
ZEB1-218ENST00000560196 FAM83GA6ND36 823 aa18.71■□□□□ 0.59
ZEB1-218ENST00000560196 CABLES1Q8TDN4 633 aa18.71■□□□□ 0.59
ZEB1-218ENST00000560196 THUMPD2Q9BTF0 503 aaKnown RBP18.71■□□□□ 0.59
ZEB1-218ENST00000560196 CRB1P82279 1406 aa18.71■□□□□ 0.59
ZEB1-218ENST00000560196 KIAA0232Q92628 1395 aa18.7■□□□□ 0.58
ZEB1-218ENST00000560196 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
ZEB1-218ENST00000560196 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
ZEB1-218ENST00000560196 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
ZEB1-218ENST00000560196 ABCA3Q99758 1704 aa18.7■□□□□ 0.58
ZEB1-218ENST00000560196 MAP3K5Q99683 1374 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 CHL1O00533 1208 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 PLIN1O60240 522 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 BCAR3O75815 825 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 USHBP1Q8N6Y0 703 aa18.69■□□□□ 0.58
ZEB1-218ENST00000560196 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
ZEB1-218ENST00000560196 LRRC37A3O60309 1634 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms