RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
SEMA4B-215ENST00000560089 SLC20A2Q08357 652 aa23.6■■□□□ 1.37
SEMA4B-215ENST00000560089 TESK2Q96S53 571 aa23.6■■□□□ 1.37
SEMA4B-215ENST00000560089 CHRM1P11229 460 aaPredicted RBP23.6■■□□□ 1.37
SEMA4B-215ENST00000560089 PTMAP06454 111 aaKnown RBP23.6■■□□□ 1.37
SEMA4B-215ENST00000560089 PRIM1P49642 420 aaKnown RBP23.6■■□□□ 1.37
SEMA4B-215ENST00000560089 IFT172Q9UG01 1749 aa23.59■■□□□ 1.37
SEMA4B-215ENST00000560089 DISP3Q9P2K9 1392 aa23.59■■□□□ 1.37
SEMA4B-215ENST00000560089 U2AF2P26368 475 aaKnown RBP eCLIP23.59■■□□□ 1.37
SEMA4B-215ENST00000560089 BCL2L12Q9HB09 334 aa23.59■■□□□ 1.37
SEMA4B-215ENST00000560089 TRMT2AQ8IZ69 625 aaKnown RBP23.58■■□□□ 1.37
SEMA4B-215ENST00000560089 TRAK1Q9UPV9 953 aa23.58■■□□□ 1.37
SEMA4B-215ENST00000560089 MYOM2P54296 1465 aa23.58■■□□□ 1.37
SEMA4B-215ENST00000560089 BAG4O95429 457 aaKnown RBP23.58■■□□□ 1.36
SEMA4B-215ENST00000560089 NINLQ9Y2I6 1382 aa23.57■■□□□ 1.36
SEMA4B-215ENST00000560089 PPLO60437 1756 aa23.57■■□□□ 1.36
SEMA4B-215ENST00000560089 DHX37Q8IY37 1157 aaKnown RBP23.57■■□□□ 1.36
SEMA4B-215ENST00000560089 RGS22Q8NE09 1264 aa23.57■■□□□ 1.36
SEMA4B-215ENST00000560089 PCDHB15Q9Y5E8 787 aa23.57■■□□□ 1.36
SEMA4B-215ENST00000560089 SPINK5Q9NQ38 1064 aaPredicted RBP23.55■■□□□ 1.36
SEMA4B-215ENST00000560089 NEURL4Q96JN8 1562 aa23.55■■□□□ 1.36
SEMA4B-215ENST00000560089 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.55■■□□□ 1.36
SEMA4B-215ENST00000560089 CERS3Q8IU89 383 aa23.54■■□□□ 1.36
SEMA4B-215ENST00000560089 CLEC17AQ6ZS10 378 aa23.54■■□□□ 1.36
SEMA4B-215ENST00000560089 NEXMIFQ5QGS0 1516 aa23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 CCDC66A2RUB6 948 aa23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 TMEM131LA2VDJ0 1609 aa23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 PIK3C2GO75747 1445 aa23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 RWDD1Q9H446 243 aaPredicted RBP23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 RPGRIP1LQ68CZ1 1315 aa23.53■■□□□ 1.36
SEMA4B-215ENST00000560089 MCTP1Q6DN14 999 aa23.52■■□□□ 1.36
SEMA4B-215ENST00000560089 STK26Q9P289 416 aa23.52■■□□□ 1.36
SEMA4B-215ENST00000560089 SCAF11Q99590 1463 aaKnown RBP23.52■■□□□ 1.36
SEMA4B-215ENST00000560089 BRD2P25440 801 aaKnown RBP23.52■■□□□ 1.36
SEMA4B-215ENST00000560089 C14orf93Q9H972 538 aaKnown RBP23.52■■□□□ 1.36
SEMA4B-215ENST00000560089 GABPB1Q06547 395 aaPredicted RBP23.51■■□□□ 1.35
SEMA4B-215ENST00000560089 FEZ1Q99689 392 aa23.51■■□□□ 1.35
SEMA4B-215ENST00000560089 NRXN1Q9ULB1 1477 aa23.51■■□□□ 1.35
SEMA4B-215ENST00000560089 TIGD1Q96MW7 591 aa23.51■■□□□ 1.35
SEMA4B-215ENST00000560089 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.353e-6■■□□□ 13.6
SEMA4B-215ENST00000560089 LAMC1P11047 1609 aa23.5■■□□□ 1.35
SEMA4B-215ENST00000560089 TMF1P82094 1093 aa23.49■■□□□ 1.35
SEMA4B-215ENST00000560089 AEBP1Q8IUX7 1158 aa23.49■■□□□ 1.35
SEMA4B-215ENST00000560089 OGFRQ9NZT2 677 aa23.49■■□□□ 1.35
SEMA4B-215ENST00000560089 SPATA31D1Q6ZQQ2 1576 aa23.49■■□□□ 1.35
SEMA4B-215ENST00000560089 IQGAP1P46940 1657 aa23.48■■□□□ 1.35
SEMA4B-215ENST00000560089 NOLC1Q14978 699 aaKnown RBP eCLIP23.48■■□□□ 1.35
SEMA4B-215ENST00000560089 PIBF1Q8WXW3 757 aa23.48■■□□□ 1.35
SEMA4B-215ENST00000560089 TNRQ92752 1358 aa23.46■■□□□ 1.35
SEMA4B-215ENST00000560089 K7ELQ4 463 aaPredicted RBP23.46■■□□□ 1.35
SEMA4B-215ENST00000560089 RBM27Q9P2N5 1060 aaKnown RBP23.46■■□□□ 1.35
SEMA4B-215ENST00000560089 A2ML1A8K2U0 1454 aa23.45■■□□□ 1.35
SEMA4B-215ENST00000560089 LRSAM1Q6UWE0 723 aa23.45■■□□□ 1.34
SEMA4B-215ENST00000560089 LMBRD1Q9NUN5 540 aa23.45■■□□□ 1.34
SEMA4B-215ENST00000560089 ANKRD7Q92527 254 aa23.45■■□□□ 1.34
SEMA4B-215ENST00000560089 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
SEMA4B-215ENST00000560089 RNF214Q8ND24 703 aa23.44■■□□□ 1.34
SEMA4B-215ENST00000560089 TRIM6-TRIM34B2RNG4 842 aa23.43■■□□□ 1.34
SEMA4B-215ENST00000560089 SLFN14P0C7P3 912 aa23.43■■□□□ 1.34
SEMA4B-215ENST00000560089 TRIM34Q9BYJ4 488 aa23.43■■□□□ 1.34
SEMA4B-215ENST00000560089 CD2BP2O95400 341 aaKnown RBP23.43■■□□□ 1.34
SEMA4B-215ENST00000560089 KIAA1210Q9ULL0 1709 aa23.43■■□□□ 1.34
SEMA4B-215ENST00000560089 GAS2L2Q8NHY3 880 aa23.42■■□□□ 1.34
SEMA4B-215ENST00000560089 SYCE3A1L190 88 aa23.41■■□□□ 1.34
SEMA4B-215ENST00000560089 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
SEMA4B-215ENST00000560089 CAPN2P17655 700 aa23.4■■□□□ 1.34
SEMA4B-215ENST00000560089 RIMS2Q9UQ26 1411 aa23.4■■□□□ 1.34
SEMA4B-215ENST00000560089 FKBP5Q13451 457 aaPredicted RBP23.4■■□□□ 1.34
SEMA4B-215ENST00000560089 APAF1O14727 1248 aa23.39■■□□□ 1.34
SEMA4B-215ENST00000560089 C17orf53Q8N3J3 647 aaPredicted RBP23.39■■□□□ 1.34
SEMA4B-215ENST00000560089 MPNDQ8N594 471 aa23.39■■□□□ 1.34
SEMA4B-215ENST00000560089 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 TULP2O00295 520 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 DIAPH3Q9NSV4 1193 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 AK9Q5TCS8 1911 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 PRPF40AO75400 957 aaKnown RBP23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 RLBP1P12271 317 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 PPP2R1AP30153 589 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 CHAF1AQ13111 956 aaPredicted RBP23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 GPT2Q8TD30 523 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 CALCOCO1Q9P1Z2 691 aa23.37■■□□□ 1.33
SEMA4B-215ENST00000560089 RIOK3O14730 519 aaKnown RBP23.36■■□□□ 1.33
SEMA4B-215ENST00000560089 KIF2CQ99661 725 aa23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 TNNQ9UQP3 1299 aa23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 C3P01024 1663 aa23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 NCBP3Q53F19 620 aaKnown RBP23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 TMEM63CQ9P1W3 806 aa23.35■■□□□ 1.33
SEMA4B-215ENST00000560089 TSPYL1Q9H0U9 437 aa23.34■■□□□ 1.33
SEMA4B-215ENST00000560089 NUCB2P80303 420 aa23.34■■□□□ 1.33
SEMA4B-215ENST00000560089 TERF2Q15554 542 aa23.34■■□□□ 1.33
SEMA4B-215ENST00000560089 SPTLC3Q9NUV7 552 aa23.34■■□□□ 1.33
SEMA4B-215ENST00000560089 ZBTB9Q96C00 473 aa23.33■■□□□ 1.33
SEMA4B-215ENST00000560089 RNF216Q9NWF9 866 aaPredicted RBP23.33■■□□□ 1.33
SEMA4B-215ENST00000560089 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
SEMA4B-215ENST00000560089 ZFYVE9O95405 1425 aa23.32■■□□□ 1.32
SEMA4B-215ENST00000560089 TTC12Q9H892 705 aaPredicted RBP23.32■■□□□ 1.32
SEMA4B-215ENST00000560089 SETBP1Q9Y6X0 1596 aa23.32■■□□□ 1.32
SEMA4B-215ENST00000560089 KIF16BQ96L93 1317 aa23.32■■□□□ 1.32
SEMA4B-215ENST00000560089 RBM42Q9BTD8 480 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms