RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 PIP4K2BP78356 416 aa18.67■□□□□ 0.58
RABGGTA-212ENST00000559974 ERICH6Q7L0X2 663 aa18.67■□□□□ 0.58
RABGGTA-212ENST00000559974 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
RABGGTA-212ENST00000559974 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 UBAP1LF5GYI3 381 aa18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 FCHSD2O94868 740 aa18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 NME9Q86XW9 330 aa18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 IL16Q14005 1332 aa18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 CT47B1P0C2W7 299 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
RABGGTA-212ENST00000559974 KIF1AQ12756 1690 aa18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 PPM1GO15355 546 aaPredicted RBP18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 FBLN1P23142 703 aa18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 SKAP1Q86WV1 359 aa18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 USP6P35125 1406 aa18.65■□□□□ 0.58
RABGGTA-212ENST00000559974 ZNF692Q9BU19 519 aaPredicted RBP18.64■□□□□ 0.58
RABGGTA-212ENST00000559974 ZRANB1Q9UGI0 708 aa18.64■□□□□ 0.58
RABGGTA-212ENST00000559974 RIPK4P57078 832 aa18.64■□□□□ 0.57
RABGGTA-212ENST00000559974 COG6Q9Y2V7 657 aa18.64■□□□□ 0.57
RABGGTA-212ENST00000559974 CLUAP1Q96AJ1 413 aa18.63■□□□□ 0.57
RABGGTA-212ENST00000559974 COG3Q96JB2 828 aa18.63■□□□□ 0.57
RABGGTA-212ENST00000559974 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
RABGGTA-212ENST00000559974 TRPM3Q9HCF6 1732 aaPredicted RBP18.63■□□□□ 0.57
RABGGTA-212ENST00000559974 TSR2Q969E8 191 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-212ENST00000559974 SSH2Q76I76 1423 aa18.62■□□□□ 0.57
RABGGTA-212ENST00000559974 AAMPQ13685 434 aa18.62■□□□□ 0.57
RABGGTA-212ENST00000559974 IPO9Q96P70 1041 aaKnown RBP18.62■□□□□ 0.57
RABGGTA-212ENST00000559974 EMILIN1Q9Y6C2 1016 aa18.62■□□□□ 0.57
RABGGTA-212ENST00000559974 NHSL1Q5SYE7 1610 aa18.61■□□□□ 0.57
RABGGTA-212ENST00000559974 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
RABGGTA-212ENST00000559974 BCL2L13Q9BXK5 485 aa18.61■□□□□ 0.57
RABGGTA-212ENST00000559974 PXDNQ92626 1479 aa18.61■□□□□ 0.57
RABGGTA-212ENST00000559974 NEFMP07197 916 aa18.61■□□□□ 0.57
RABGGTA-212ENST00000559974 PIK3C2AO00443 1686 aa18.6■□□□□ 0.57
RABGGTA-212ENST00000559974 PSME1Q06323 249 aa18.6■□□□□ 0.57
RABGGTA-212ENST00000559974 NUTM2GQ5VZR2 741 aa18.6■□□□□ 0.57
RABGGTA-212ENST00000559974 NOP58Q9Y2X3 529 aaKnown RBP18.6■□□□□ 0.57
RABGGTA-212ENST00000559974 DLG5Q8TDM6 1919 aa18.6■□□□□ 0.57
RABGGTA-212ENST00000559974 TOM1O60784 492 aa18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 PLEKHG5O94827 1062 aa18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 IL13P35225 146 aa18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 EXOSC9Q06265 439 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 KRT28Q7Z3Y7 464 aa18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 TTC21BQ7Z4L5 1316 aa18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
RABGGTA-212ENST00000559974 RLBP1P12271 317 aa18.58■□□□□ 0.56
RABGGTA-212ENST00000559974 IGHDP01880 384 aa18.57■□□□□ 0.56
RABGGTA-212ENST00000559974 VIRMAQ69YN4 1812 aaKnown RBP18.57■□□□□ 0.56
RABGGTA-212ENST00000559974 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
RABGGTA-212ENST00000559974 TNNQ9UQP3 1299 aa18.57■□□□□ 0.56
RABGGTA-212ENST00000559974 HMOX1P09601 288 aa18.56■□□□□ 0.56
RABGGTA-212ENST00000559974 ALS2Q96Q42 1657 aa18.56■□□□□ 0.56
RABGGTA-212ENST00000559974 NFE2L2Q16236 605 aa18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 NPHP3Q7Z494 1330 aa18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 OVOS2A0A0J9YW53 1432 aa18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 OVOS2Q6IE36 1432 aa18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 NPM2Q86SE8 214 aaKnown RBP18.55■□□□□ 0.56
RABGGTA-212ENST00000559974 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
RABGGTA-212ENST00000559974 PHACTR3Q96KR7 559 aa18.54■□□□□ 0.56
RABGGTA-212ENST00000559974 AHDC1Q5TGY3 1603 aaPredicted RBP18.54■□□□□ 0.56
RABGGTA-212ENST00000559974 SOS2Q07890 1332 aaPredicted RBP18.53■□□□□ 0.56
RABGGTA-212ENST00000559974 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
RABGGTA-212ENST00000559974 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
RABGGTA-212ENST00000559974 SSH1Q8WYL5 1049 aa18.53■□□□□ 0.56
RABGGTA-212ENST00000559974 COL16A1Q07092 1604 aaPredicted RBP18.52■□□□□ 0.56
RABGGTA-212ENST00000559974 RGS3P49796 1198 aa18.52■□□□□ 0.56
RABGGTA-212ENST00000559974 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
RABGGTA-212ENST00000559974 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-212ENST00000559974 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
RABGGTA-212ENST00000559974 CALD1Q05682 793 aaKnown RBP18.51■□□□□ 0.55
RABGGTA-212ENST00000559974 ZBTB47Q9UFB7 747 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-212ENST00000559974 ABTB2Q8N961 1025 aa18.51■□□□□ 0.55
RABGGTA-212ENST00000559974 PEAK1Q9H792 1746 aa18.5■□□□□ 0.55
RABGGTA-212ENST00000559974 SOX12O15370 315 aa18.5■□□□□ 0.55
RABGGTA-212ENST00000559974 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
RABGGTA-212ENST00000559974 C8orf34Q49A92 452 aa18.5■□□□□ 0.55
RABGGTA-212ENST00000559974 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
RABGGTA-212ENST00000559974 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
RABGGTA-212ENST00000559974 TRIM27P14373 513 aa18.49■□□□□ 0.55
RABGGTA-212ENST00000559974 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
RABGGTA-212ENST00000559974 USP31Q70CQ4 1352 aa18.49■□□□□ 0.55
RABGGTA-212ENST00000559974 RGPD1P0DJD0 1748 aa18.49■□□□□ 0.55
RABGGTA-212ENST00000559974 MED1Q15648 1581 aaPredicted RBP18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 TTC21AQ8NDW8 1320 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 KIF16BQ96L93 1317 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 NLRP6P59044 892 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 LMOD3Q0VAK6 560 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 CRYBG1Q9Y4K1 1723 aa18.48■□□□□ 0.55
RABGGTA-212ENST00000559974 SBNO1A3KN83 1393 aa18.47■□□□□ 0.55
RABGGTA-212ENST00000559974 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
RABGGTA-212ENST00000559974 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-212ENST00000559974 LAS1LQ9Y4W2 734 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-212ENST00000559974 USP54Q70EL1 1684 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms