RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 PLXNC1O60486 1568 aa6.29□□□□□ -1.4
HMG20A-204ENST00000558288 EIF2AK4Q9P2K8 1649 aaKnown RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 MROH2AA6NES4 1674 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 MCTP1Q6DN14 999 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 CAVIN1Q6NZI2 390 aaKnown RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 SMC5Q8IY18 1101 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 PPP1R9BQ96SB3 815 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 FOXO3O43524 673 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 SF3B2Q13435 895 aaKnown RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 TSR2Q969E8 191 aaKnown RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 LRRC59Q96AG4 307 aaKnown RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 ZHX1Q9UKY1 873 aaPredicted RBP6.28□□□□□ -1.4
HMG20A-204ENST00000558288 EFCAB6Q5THR3 1501 aa6.28□□□□□ -1.4
HMG20A-204ENST00000558288 K7ELQ4 463 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 DNTTIP2Q5QJE6 756 aaKnown RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 SNX21Q969T3 373 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 RBM42Q9BTD8 480 aaKnown RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 CEP152O94986 1710 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 CD2BP2O95400 341 aaKnown RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 PTMAP06454 111 aaKnown RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 RBM25P49756 843 aaKnown RBP6.27□□□□□ -1.41
HMG20A-204ENST00000558288 USP21Q9UK80 565 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 PRDM4Q9UKN5 801 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 DDX19BQ9UMR2 479 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 TBX22Q9Y458 520 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 IQGAP1P46940 1657 aa6.27□□□□□ -1.41
HMG20A-204ENST00000558288 BAG4O95429 457 aaKnown RBP6.26□□□□□ -1.41
HMG20A-204ENST00000558288 U2AF1L5P0DN76 240 aaPredicted RBP6.26□□□□□ -1.41
HMG20A-204ENST00000558288 DDIT3P35638 169 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 U2AF1Q01081 240 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMG20A-204ENST00000558288 KLHL40Q2TBA0 621 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 BRINP3Q76B58 766 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 WDR63Q8IWG1 891 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 ORAI2Q96SN7 254 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 LAMC1P11047 1609 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 SYNMO15061 1565 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 GAS2L2Q8NHY3 880 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 CFAP53Q96M91 514 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 CARD14Q9BXL6 1004 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 TRIM27P14373 513 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 ANKRD45Q5TZF3 282 aa6.26□□□□□ -1.41
HMG20A-204ENST00000558288 NEURL4Q96JN8 1562 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 EXOSC9Q06265 439 aaKnown RBP6.25□□□□□ -1.41
HMG20A-204ENST00000558288 HDAC1Q13547 482 aaPredicted RBP6.25□□□□□ -1.41
HMG20A-204ENST00000558288 ZSCAN23Q3MJ62 389 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 TMEM132EQ6IEE7 984 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 NCOA3Q9Y6Q9 1424 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 VGFO15240 615 aaPredicted RBP6.25□□□□□ -1.41
HMG20A-204ENST00000558288 TERF1P54274 439 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 CSPP1Q1MSJ5 1256 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 RBSNQ9H1K0 784 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 NOB1Q9ULX3 412 aaKnown RBP6.25□□□□□ -1.41
HMG20A-204ENST00000558288 NOL7Q9UMY1 257 aaKnown RBP6.25□□□□□ -1.41
HMG20A-204ENST00000558288 NPC1L1Q9UHC9 1359 aa6.25□□□□□ -1.41
HMG20A-204ENST00000558288 MTHFSP49914 203 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 MTERF4Q7Z6M4 381 aaKnown RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 CHD1LQ86WJ1 897 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 TMEM57Q8N5G2 664 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 ARHGEF5Q12774 1597 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 PRPF40AO75400 957 aaKnown RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 PRIM1P49642 420 aaKnown RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 FOXD4L5Q5VV16 416 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 ATF7IPQ6VMQ6 1270 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 RNF214Q8ND24 703 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 FOXD4L4Q8WXT5 416 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 RBM27Q9P2N5 1060 aaKnown RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 FAM135BQ49AJ0 1406 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 DYNC1I1O14576 645 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 U2SURPO15042 1029 aaKnown RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 SMAP1Q8IYB5 467 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 SSH1Q8WYL5 1049 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 POLR3AO14802 1390 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 VWDEQ8N2E2 1590 aa6.24□□□□□ -1.41
HMG20A-204ENST00000558288 ZNF142P52746 1687 aaPredicted RBP6.24□□□□□ -1.41
HMG20A-204ENST00000558288 NUCB1Q02818 461 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 UPF1Q92900 1129 aaKnown RBP eCLIP6.23□□□□□ -1.414e-7■■■□□ 15.4
HMG20A-204ENST00000558288 ZRANB1Q9UGI0 708 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 SPATA31A6Q5VVP1 1343 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 PIK3C2BO00750 1634 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
HMG20A-204ENST00000558288 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 CFAP70Q5T0N1 1121 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 SASS6Q6UVJ0 657 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 TBC1D9Q6ZT07 1266 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 WAPLQ7Z5K2 1190 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 MPNDQ8N594 471 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 C1orf115Q9H7X2 142 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 ZKSCAN5Q9Y2L8 839 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 MED14O60244 1454 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 RBM6P78332 1123 aaKnown RBP6.23□□□□□ -1.41
HMG20A-204ENST00000558288 PSME1Q06323 249 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 CABLES1Q8TDN4 633 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 CCDC39Q9UFE4 941 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 KIF16BQ96L93 1317 aa6.23□□□□□ -1.41
HMG20A-204ENST00000558288 SYCE3A1L190 88 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 IPO8O15397 1037 aaKnown RBP6.22□□□□□ -1.41
HMG20A-204ENST00000558288 ZNF445P59923 1031 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 NUCB2P80303 420 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 KIF2CQ99661 725 aa6.22□□□□□ -1.41
HMG20A-204ENST00000558288 RNF17Q9BXT8 1623 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms